RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 HEBP2Q9Y5Z4 205 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 MED12Q93074 2177 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 ASXL3Q9C0F0 2248 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 C11orf98E9PRG8 122 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 M0R233 179 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 TPOP07202 933 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 KIR2DL1P43626 348 aaPredicted RBP8.35□□□□□ -1.07
MSH4-201ENST00000263187 TSFMP43897 325 aaKnown RBP8.35□□□□□ -1.07
MSH4-201ENST00000263187 TAS2R43P59537 309 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 PITPNAQ00169 270 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 C19orf57Q0VDD7 668 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 ANGPT1Q15389 498 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 ALG11Q2TAA5 492 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 ITPRIPL2Q3MIP1 535 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 CD276Q5ZPR3 534 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 OR5M10Q6IEU7 315 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 ALKAL2Q6UX46 152 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 SLC35D2Q76EJ3 337 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 OR4D10Q8NGI6 311 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 COQ8AQ8NI60 647 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 THEM6Q8WUY1 208 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 ATOH1Q92858 354 aaPredicted RBP8.35□□□□□ -1.07
MSH4-201ENST00000263187 ZNF524Q96C55 264 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 TM4SF19Q96DZ7 209 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 WDR92Q96MX6 357 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 MICU1Q9BPX6 476 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 GINS4Q9BRT9 223 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 NRSN2Q9GZP1 204 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 ZMAT3Q9HA38 289 aaKnown RBP8.35□□□□□ -1.07
MSH4-201ENST00000263187 MKKSQ9NPJ1 570 aaPredicted RBP8.35□□□□□ -1.07
MSH4-201ENST00000263187 SCML1Q9UN30 329 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 PCDHGA5Q9Y5G8 931 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 SLCO1B1Q9Y6L6 691 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 FREM2Q5SZK8 3169 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 IFITM5A6NNB3 132 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 B4DGG1 531 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 GPR89AB7ZAQ6 455 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 LGALS8O00214 317 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 PEX14O75381 377 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 ATP1B1P05026 303 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 GPR89BP0CG08 455 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 SMIM10L1P0DMW3 83 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 KIAA1024LP59773 190 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 PUDPQ08623 228 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 ENPP2Q13822 863 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 ZNHIT3Q15649 155 aaPredicted RBP8.34□□□□□ -1.07
MSH4-201ENST00000263187 FAM199XQ6PEV8 388 aaPredicted RBP8.34□□□□□ -1.07
MSH4-201ENST00000263187 NPSR1Q6W5P4 371 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 MAMSTRQ6ZN01 415 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 Q6ZSR6 202 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 BTN2A1Q7KYR7 527 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 TAF8Q7Z7C8 310 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 ZNF321PQ8N8H1 164 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 NPEPL1Q8NDH3 523 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 NT5CQ8TCD5 201 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 SLC22A18Q96BI1 424 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 SMIM10Q96HG1 83 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 ALG12Q9BV10 488 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 C1QTNF7Q9BXJ2 289 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 WDR76Q9H967 626 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 TCF7L1Q9HCS4 588 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 B3GNT2Q9NY97 397 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 CPNE7Q9UBL6 633 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 CAMK2AQ9UQM7 478 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 PCDHGA9Q9Y5G4 932 aaKnown RBP8.34□□□□□ -1.07
MSH4-201ENST00000263187 NPFFR2Q9Y5X5 522 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 A0A1W2PQF6 199 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 ARPC5O15511 151 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 GALR3O60755 368 aaPredicted RBP8.34□□□□□ -1.07
MSH4-201ENST00000263187 WISP1O95388 367 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 APBB3O95704 486 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 HLA-DQA2P01906 255 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 OR2T7P0C7T2 308 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 PSMB1P20618 241 aaKnown RBP8.34□□□□□ -1.07
MSH4-201ENST00000263187 ZNF10P21506 573 aaPredicted RBP8.34□□□□□ -1.07
MSH4-201ENST00000263187 RPS4Y1P22090 263 aaKnown RBP8.34□□□□□ -1.07
MSH4-201ENST00000263187 ITPKBP27987 946 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 NTSR1P30989 418 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 FOXL2P58012 376 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 ACTC1P68032 377 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 ACTA1P68133 377 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 C9orf50Q5SZB4 431 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 ZNF613Q6PF04 617 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 DPY19L4Q7Z388 723 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 TOR1AIP2Q8NFQ8 470 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 OR13H1Q8NG92 308 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 OR6N2Q8NGY6 317 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 OR2T27Q8NH04 317 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 OR56B4Q8NH76 319 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 PHOSPHO1Q8TCT1 267 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 ZDHHC1Q8WTX9 485 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 SMIM4Q8WVI0 70 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 SARGQ9BW04 601 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 TAS2R10Q9NYW0 307 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 OR5V1Q9UGF6 321 aa8.34□□□□□ -1.07
MSH4-201ENST00000263187 TRAV8-7A0A075B6U6 113 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 LOC100509620A0A075B734 347 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 MEIKINA0A087WXM9 373 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 PRR19A6NJB7 356 aa8.34□□□□□ -1.08
MSH4-201ENST00000263187 ZNF879B4DU55 563 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms