RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 IFNGP01579 166 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 CALCBP10092 127 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 C6P13671 934 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 BCL6P41182 706 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 MAGEB1P43366 347 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 PRMT2P55345 433 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 SERTAD2Q14140 314 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 ZNF528Q3MIS6 628 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 MFSD12Q6NUT3 480 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 ABHD17CQ6PCB6 329 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 UQCC3Q6UW78 93 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.75□□□□□ -0.21
XRCC1-201ENST00000262887 OR1M1Q8NGA1 313 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 OR4C16Q8NGL9 310 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 STK35Q8TDR2 534 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 IRF7Q92985 503 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 SLC25A28Q96A46 364 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 COL26A1Q96A83 441 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 MIB2Q96AX9 1013 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 PRRC2BQ5JSZ5 2229 aaKnown RBP13.75□□□□□ -0.21
XRCC1-201ENST00000262887 NUMA1Q14980 2115 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 SPINT1O43278 529 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 TMEM127O75204 238 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 MNDAP41218 407 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 KRT77Q7Z794 578 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 BOLLQ8N9W6 283 aaKnown RBP13.74□□□□□ -0.21
XRCC1-201ENST00000262887 SDR9C7Q8NEX9 313 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 MRI1Q9BV20 369 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 TM7SF3Q9NS93 570 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 USP36Q9P275 1121 aaKnown RBP13.74□□□□□ -0.21
XRCC1-201ENST00000262887 GPN3Q9UHW5 284 aaPredicted RBP13.74□□□□□ -0.21
XRCC1-201ENST00000262887 MOKQ9UQ07 419 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 TET1Q8NFU7 2136 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 HEATR5BQ9P2D3 2071 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 TRAV14DV4A0A0A6YYC5 116 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 GPRIN2O60269 458 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 EIF3GO75821 320 aaKnown RBP eCLIP13.74□□□□□ -0.21
XRCC1-201ENST00000262887 LAMP2P13473 410 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 AGTR1P30556 359 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 RFC3P40938 356 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 MICBQ29980 383 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 C4orf46Q504U0 113 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 SLC35F2Q8IXU6 374 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 OR52E2Q8NGJ4 325 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 ARSGQ96EG1 525 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 ZNF681Q96N22 645 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 MS4A4EQ96PG1 132 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 ZNF251Q9BRH9 671 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 TMEM185BQ9H7F4 350 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 EPHA6Q9UF33 1036 aa13.74□□□□□ -0.21
XRCC1-201ENST00000262887 KANTRA0A1W2PQU2 76 aa13.73□□□□□ -0.21
XRCC1-201ENST00000262887 CTNSO60931 367 aa13.73□□□□□ -0.21
XRCC1-201ENST00000262887 ACAA1P09110 424 aaPredicted RBP13.73□□□□□ -0.21
XRCC1-201ENST00000262887 SELLP14151 372 aa13.73□□□□□ -0.21
XRCC1-201ENST00000262887 UBE2IP63279 158 aaKnown RBP13.73□□□□□ -0.21
XRCC1-201ENST00000262887 PRDX1Q06830 199 aaKnown RBP13.73□□□□□ -0.21
XRCC1-201ENST00000262887 DUSP8Q13202 625 aa13.73□□□□□ -0.21
XRCC1-201ENST00000262887 AMZ1Q400G9 498 aa13.73□□□□□ -0.21
XRCC1-201ENST00000262887 MRPL2Q5T653 305 aaKnown RBP13.73□□□□□ -0.21
XRCC1-201ENST00000262887 ARHGAP11AQ6P4F7 1023 aa13.73□□□□□ -0.21
XRCC1-201ENST00000262887 CBLN2Q8IUK8 224 aa13.73□□□□□ -0.21
XRCC1-201ENST00000262887 OR7G2Q8NG99 324 aa13.73□□□□□ -0.21
XRCC1-201ENST00000262887 OR6N1Q8NGY5 312 aa13.73□□□□□ -0.21
XRCC1-201ENST00000262887 SFT2D1Q8WV19 159 aa13.73□□□□□ -0.21
XRCC1-201ENST00000262887 TMEM218A2RU14 115 aa13.73□□□□□ -0.21
XRCC1-201ENST00000262887 GLSO94925 669 aaPredicted RBP13.73□□□□□ -0.21
XRCC1-201ENST00000262887 AGR2O95994 175 aa13.73□□□□□ -0.21
XRCC1-201ENST00000262887 PAK4O96013 591 aaPredicted RBP13.73□□□□□ -0.21
XRCC1-201ENST00000262887 LRG1P02750 347 aa13.73□□□□□ -0.21
XRCC1-201ENST00000262887 LUMP51884 338 aaPredicted RBP13.73□□□□□ -0.21
XRCC1-201ENST00000262887 TNFRSF17Q02223 184 aa13.73□□□□□ -0.21
XRCC1-201ENST00000262887 LY6G5CQ5SRR4 150 aa13.73□□□□□ -0.21
XRCC1-201ENST00000262887 DNM1P46Q6ZS02 220 aa13.73□□□□□ -0.21
XRCC1-201ENST00000262887 POMGNT2Q8NAT1 580 aa13.73□□□□□ -0.21
XRCC1-201ENST00000262887 OTUB2Q96DC9 234 aa13.73□□□□□ -0.21
XRCC1-201ENST00000262887 TNFRSF13CQ96RJ3 184 aa13.73□□□□□ -0.21
XRCC1-201ENST00000262887 GAREM1Q9H706 876 aa13.73□□□□□ -0.21
XRCC1-201ENST00000262887 MEPEQ9NQ76 525 aaPredicted RBP13.73□□□□□ -0.21
XRCC1-201ENST00000262887 PRSS16Q9NQE7 514 aa13.73□□□□□ -0.21
XRCC1-201ENST00000262887 SPHK2Q9NRA0 654 aa13.73□□□□□ -0.21
XRCC1-201ENST00000262887 WSB2Q9NYS7 404 aaPredicted RBP13.73□□□□□ -0.21
XRCC1-201ENST00000262887 MBD2Q9UBB5 411 aa13.73□□□□□ -0.21
XRCC1-201ENST00000262887 TBC1D3KA0A087X1G2 549 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 TBC1D3BA6NDS4 549 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 TBC1D3FA6NER0 549 aaPredicted RBP13.72□□□□□ -0.21
XRCC1-201ENST00000262887 H7C417 338 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 THBS1P07996 1170 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 SMIM6P0DI80 62 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 TMIGD3P0DMS9 266 aaPredicted RBP13.72□□□□□ -0.21
XRCC1-201ENST00000262887 ITPKBP27987 946 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 ZIC1Q15915 447 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 GUCA2BQ16661 112 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 DUSP5Q16690 384 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 ARHGAP11BQ3KRB8 267 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 TBC1D3GQ6DHY5 549 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 OR2W3Q7Z3T1 314 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 OR2L5Q8NG80 312 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 OR4K13Q8NH42 304 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 GRHL3Q8TE85 626 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 WDR13Q9H1Z4 485 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms