RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 SLC22A16Q86VW1 577 aa24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 ARL5BQ96KC2 179 aa24.78■■□□□ 1.56
SMARCD3-201ENST00000262188 H0YC42 278 aa24.77■■□□□ 1.56
SMARCD3-201ENST00000262188 MITFO75030 526 aaPredicted RBP24.77■■□□□ 1.56
SMARCD3-201ENST00000262188 FOSL1P15407 271 aa24.77■■□□□ 1.56
SMARCD3-201ENST00000262188 APOBEC1P41238 236 aaKnown RBP24.77■■□□□ 1.56
SMARCD3-201ENST00000262188 TPD52P55327 224 aaPredicted RBP24.77■■□□□ 1.56
SMARCD3-201ENST00000262188 DLX5P56178 289 aa24.77■■□□□ 1.56
SMARCD3-201ENST00000262188 ZNF773Q6PK81 442 aa24.77■■□□□ 1.56
SMARCD3-201ENST00000262188 HIPK1Q86Z02 1210 aa24.77■■□□□ 1.56
SMARCD3-201ENST00000262188 SVOPLQ8N434 492 aa24.77■■□□□ 1.56
SMARCD3-201ENST00000262188 Q8NA96 180 aa24.77■■□□□ 1.56
SMARCD3-201ENST00000262188 FAM98AQ8NCA5 519 aaKnown RBP24.77■■□□□ 1.56
SMARCD3-201ENST00000262188 ATRXP46100 2492 aa24.77■■□□□ 1.56
SMARCD3-201ENST00000262188 TFECO14948 347 aaPredicted RBP24.76■■□□□ 1.55
SMARCD3-201ENST00000262188 HPNP05981 417 aa24.76■■□□□ 1.55
SMARCD3-201ENST00000262188 IFI30P13284 250 aa24.76■■□□□ 1.55
SMARCD3-201ENST00000262188 MAKP20794 623 aa24.76■■□□□ 1.55
SMARCD3-201ENST00000262188 HTR3AP46098 478 aa24.76■■□□□ 1.55
SMARCD3-201ENST00000262188 SERPINB10P48595 397 aa24.76■■□□□ 1.55
SMARCD3-201ENST00000262188 ARHGDIAP52565 204 aa24.76■■□□□ 1.55
SMARCD3-201ENST00000262188 RRM2BQ7LG56 351 aa24.76■■□□□ 1.55
SMARCD3-201ENST00000262188 FAM109AQ8N4B1 249 aa24.76■■□□□ 1.55
SMARCD3-201ENST00000262188 ATG16L2Q8NAA4 619 aa24.76■■□□□ 1.55
SMARCD3-201ENST00000262188 MAGEE2Q8TD90 523 aaPredicted RBP24.76■■□□□ 1.55
SMARCD3-201ENST00000262188 SFXN2Q96NB2 322 aa24.76■■□□□ 1.55
SMARCD3-201ENST00000262188 MED31Q9Y3C7 131 aa24.76■■□□□ 1.55
SMARCD3-201ENST00000262188 ACOT7O00154 380 aa24.76■■□□□ 1.55
SMARCD3-201ENST00000262188 CCRL2O00421 344 aa24.76■■□□□ 1.55
SMARCD3-201ENST00000262188 RPS5P46782 204 aaKnown RBP24.76■■□□□ 1.55
SMARCD3-201ENST00000262188 B2MP61769 119 aa24.76■■□□□ 1.55
SMARCD3-201ENST00000262188 IL1RL1Q01638 556 aa24.76■■□□□ 1.55
SMARCD3-201ENST00000262188 SLC36A3Q495N2 470 aa24.76■■□□□ 1.55
SMARCD3-201ENST00000262188 GALNT5Q7Z7M9 940 aa24.76■■□□□ 1.55
SMARCD3-201ENST00000262188 GON7Q9BXV9 100 aa24.76■■□□□ 1.55
SMARCD3-201ENST00000262188 ATPIF1Q9UII2 106 aa24.76■■□□□ 1.55
SMARCD3-201ENST00000262188 TLN1Q9Y490 2541 aaKnown RBP24.76■■□□□ 1.55
SMARCD3-201ENST00000262188 CD40LGP29965 261 aa24.75■■□□□ 1.55
SMARCD3-201ENST00000262188 EIF1P41567 113 aaKnown RBP24.75■■□□□ 1.55
SMARCD3-201ENST00000262188 OMPP47874 163 aa24.75■■□□□ 1.55
SMARCD3-201ENST00000262188 LRRC17Q8N6Y2 441 aa24.75■■□□□ 1.55
SMARCD3-201ENST00000262188 TAAR8Q969N4 342 aa24.75■■□□□ 1.55
SMARCD3-201ENST00000262188 PIGQQ9BRB3 760 aa24.75■■□□□ 1.55
SMARCD3-201ENST00000262188 C9orf16Q9BUW7 83 aa24.75■■□□□ 1.55
SMARCD3-201ENST00000262188 NAA50Q9GZZ1 169 aaKnown RBP24.75■■□□□ 1.55
SMARCD3-201ENST00000262188 A0A1W2PNR3 127 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 CDC42EP2O14613 210 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 TFPIP10646 304 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 ALDH6A1Q02252 535 aaKnown RBP24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 PCSK4Q6UW60 755 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 TRILQ7L0X0 811 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 PIGXQ8TBF5 258 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 MOGAT1Q96PD6 335 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 ADI1Q9BV57 179 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 ADNPQ9H2P0 1102 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 TUBD1Q9UJT1 453 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 ZNF229Q9UJW7 825 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 NUP50Q9UKX7 468 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 BET1O15155 118 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 RBM34P42696 430 aaKnown RBP24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 RAD23AP54725 363 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 MLLT10P55197 1068 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 GFRA1P56159 465 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 LTBQ06643 244 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 SLC10A1Q14973 349 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 GXYLT1Q4G148 440 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 GTF2IRD2BQ6EKJ0 949 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 GTF2IRD2Q86UP8 949 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 MFSD4AQ8N468 514 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 HS6ST2Q96MM7 605 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 ZDHHC11Q9H8X9 412 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 KIF17Q9P2E2 1029 aa24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 TMEFF2Q9UIK5 374 aaPredicted RBP24.74■■□□□ 1.55
SMARCD3-201ENST00000262188 DNAJC13O75165 2243 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 CH25HO95992 272 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 PTTG1O95997 202 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 ADH6P28332 368 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 CLDN20P56880 219 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 TMEM176BQ3YBM2 270 aaPredicted RBP24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 UBQLNLQ8IYU4 475 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 BPIFA2Q96DR5 249 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 TMEM43Q9BTV4 400 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 PTDSS2Q9BVG9 487 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 GABARAPL1Q9H0R8 117 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 ZNF221Q9UK13 617 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 A8MVM7 634 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 FAM25EA8MYX2 175 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 NPIPA5E9PKD4 350 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 IGFBP1P08833 259 aaPredicted RBP24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 HSF1Q00613 529 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 IFITM3Q01628 133 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 PRKCDQ05655 676 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 DAG1Q14118 895 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 SYT14P1Q58G82 188 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 C3orf33Q6P1S2 294 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 FAHD1Q6P587 224 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 C10orf53Q8N6V4 93 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 PNPLA2Q96AD5 504 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 CEP19Q96LK0 163 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 SEC14L4Q9UDX3 406 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms