RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 PRSS16Q9NQE7 514 aa14.59□□□□□ -0.07
LMNB1-201ENST00000261366 EXOSC3Q9NQT5 275 aaKnown RBP14.59□□□□□ -0.07
LMNB1-201ENST00000261366 FLRT3Q9NZU0 649 aa14.59□□□□□ -0.07
LMNB1-201ENST00000261366 A0A1B0GWA3 101 aa14.59□□□□□ -0.07
LMNB1-201ENST00000261366 F5H5P2 479 aa14.59□□□□□ -0.07
LMNB1-201ENST00000261366 CTDSPLO15194 276 aa14.59□□□□□ -0.07
LMNB1-201ENST00000261366 NDUFB6O95139 128 aa14.59□□□□□ -0.07
LMNB1-201ENST00000261366 NID1P14543 1247 aa14.59□□□□□ -0.07
LMNB1-201ENST00000261366 PEBP1P30086 187 aaKnown RBP14.59□□□□□ -0.07
LMNB1-201ENST00000261366 DUSP8Q13202 625 aa14.59□□□□□ -0.07
LMNB1-201ENST00000261366 SRSF5Q13243 272 aaKnown RBP14.59□□□□□ -0.07
LMNB1-201ENST00000261366 ARHGAP11BQ3KRB8 267 aa14.59□□□□□ -0.07
LMNB1-201ENST00000261366 LRRN1Q6UXK5 716 aa14.59□□□□□ -0.07
LMNB1-201ENST00000261366 ZNF619Q8N2I2 560 aa14.59□□□□□ -0.07
LMNB1-201ENST00000261366 OR4K14Q8NGD5 310 aa14.59□□□□□ -0.07
LMNB1-201ENST00000261366 OR51S1Q8NGJ8 323 aa14.59□□□□□ -0.07
LMNB1-201ENST00000261366 OR4C16Q8NGL9 310 aa14.59□□□□□ -0.07
LMNB1-201ENST00000261366 SLC25A28Q96A46 364 aa14.59□□□□□ -0.07
LMNB1-201ENST00000261366 Q96M85 177 aa14.59□□□□□ -0.07
LMNB1-201ENST00000261366 TBC1D3KA0A087X1G2 549 aa14.58□□□□□ -0.08
LMNB1-201ENST00000261366 TBC1D3BA6NDS4 549 aa14.58□□□□□ -0.08
LMNB1-201ENST00000261366 TBC1D3FA6NER0 549 aaPredicted RBP14.58□□□□□ -0.08
LMNB1-201ENST00000261366 D6RAR5 112 aa14.58□□□□□ -0.08
LMNB1-201ENST00000261366 LYPD3O95274 346 aa14.58□□□□□ -0.08
LMNB1-201ENST00000261366 ART1P52961 327 aa14.58□□□□□ -0.08
LMNB1-201ENST00000261366 DLX5P56178 289 aa14.58□□□□□ -0.08
LMNB1-201ENST00000261366 HNRNPA1L2Q32P51 320 aaKnown RBP14.58□□□□□ -0.08
LMNB1-201ENST00000261366 ALG10BQ5I7T1 473 aa14.58□□□□□ -0.08
LMNB1-201ENST00000261366 TBC1D3GQ6DHY5 549 aa14.58□□□□□ -0.08
LMNB1-201ENST00000261366 RPL22L1Q6P5R6 122 aaKnown RBP14.58□□□□□ -0.08
LMNB1-201ENST00000261366 OR10K1Q8NGX5 313 aa14.58□□□□□ -0.08
LMNB1-201ENST00000261366 COX14Q96I36 57 aa14.58□□□□□ -0.08
LMNB1-201ENST00000261366 NPAS1Q99742 590 aa14.58□□□□□ -0.08
LMNB1-201ENST00000261366 TAS2R3Q9NYW6 316 aa14.58□□□□□ -0.08
LMNB1-201ENST00000261366 CPNE7Q9UBL6 633 aa14.58□□□□□ -0.08
LMNB1-201ENST00000261366 CXorf51AA0A1B0GTR3 108 aa14.58□□□□□ -0.08
LMNB1-201ENST00000261366 CISD3P0C7P0 127 aa14.58□□□□□ -0.08
LMNB1-201ENST00000261366 LINC00271P0C7V0 271 aa14.58□□□□□ -0.08
LMNB1-201ENST00000261366 SLC6A6P31641 620 aa14.58□□□□□ -0.08
LMNB1-201ENST00000261366 PLAURQ03405 335 aa14.58□□□□□ -0.08
LMNB1-201ENST00000261366 ZNF234Q14588 700 aa14.58□□□□□ -0.08
LMNB1-201ENST00000261366 TMPRSS11FQ6ZWK6 438 aa14.58□□□□□ -0.08
LMNB1-201ENST00000261366 NDUFAF7Q7L592 441 aa14.58□□□□□ -0.08
LMNB1-201ENST00000261366 PRSS41Q7RTY9 318 aa14.58□□□□□ -0.08
LMNB1-201ENST00000261366 GON4LQ3T8J9 2241 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 PTP4A3O75365 173 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 B3GALNT1O75752 331 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 OR2A4O95047 310 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 GTF2F2P13984 249 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 CPMP14384 443 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 VASPP50552 380 aaPredicted RBP14.57□□□□□ -0.08
LMNB1-201ENST00000261366 ACTA2P62736 377 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 ACTG2P63267 376 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 ELAVL3Q14576 367 aaKnown RBP14.57□□□□□ -0.08
LMNB1-201ENST00000261366 ZNF169Q14929 603 aaPredicted RBP14.57□□□□□ -0.08
LMNB1-201ENST00000261366 RD3Q7Z3Z2 195 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 GLB1L2Q8IW92 636 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 OR10AC1Q8NH08 325 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 C10orf90Q96M02 699 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 OR2A7Q96R45 310 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 ADAT1Q9BUB4 502 aaKnown RBP14.57□□□□□ -0.08
LMNB1-201ENST00000261366 HPF1Q9NWY4 346 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 NAP1L6A6NFF2 107 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 DBIP07108 87 aaKnown RBP14.57□□□□□ -0.08
LMNB1-201ENST00000261366 OR2T7P0C7T2 308 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 CPN1P15169 458 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 ADRA2CP18825 462 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 EMDP50402 254 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 EFNB2P52799 333 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 MAT1AQ00266 395 aaKnown RBP14.57□□□□□ -0.08
LMNB1-201ENST00000261366 ELFN2Q5R3F8 820 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 RNF44Q7L0R7 432 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 ZNF765Q7L2R6 523 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 RNF113BQ8IZP6 322 aaKnown RBP14.57□□□□□ -0.08
LMNB1-201ENST00000261366 OR2AK2Q8NG84 335 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 OR2T27Q8NH04 317 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 PNPLA2Q96AD5 504 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 LCORQ96JN0 433 aaPredicted RBP14.57□□□□□ -0.08
LMNB1-201ENST00000261366 EMC3Q9P0I2 261 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 MYEF2Q9P2K5 600 aaKnown RBP14.57□□□□□ -0.08
LMNB1-201ENST00000261366 MAFFQ9ULX9 164 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 OR10H1Q9Y4A9 318 aa14.57□□□□□ -0.08
LMNB1-201ENST00000261366 LOC100509620A0A075B734 347 aa14.56□□□□□ -0.08
LMNB1-201ENST00000261366 TMEM272A0A1B0GTI8 110 aa14.56□□□□□ -0.08
LMNB1-201ENST00000261366 OR6C68A6NDL8 312 aa14.56□□□□□ -0.08
LMNB1-201ENST00000261366 TUBAL3A6NHL2 446 aa14.56□□□□□ -0.08
LMNB1-201ENST00000261366 ACOT7O00154 380 aa14.56□□□□□ -0.08
LMNB1-201ENST00000261366 PRKNO60260 465 aaPredicted RBP14.56□□□□□ -0.08
LMNB1-201ENST00000261366 RBBP9O75884 186 aa14.56□□□□□ -0.08
LMNB1-201ENST00000261366 CSN2P05814 226 aa14.56□□□□□ -0.08
LMNB1-201ENST00000261366 DDX6P26196 483 aaKnown RBP eCLIP14.56□□□□□ -0.088e-10■■■■□ 23.3
LMNB1-201ENST00000261366 EPHA4P54764 986 aa14.56□□□□□ -0.08
LMNB1-201ENST00000261366 MC2RQ01718 297 aa14.56□□□□□ -0.08
LMNB1-201ENST00000261366 RUNX2Q13950 521 aa14.56□□□□□ -0.08
LMNB1-201ENST00000261366 ARHGAP11AQ6P4F7 1023 aa14.56□□□□□ -0.08
LMNB1-201ENST00000261366 SPRED2Q7Z698 418 aa14.56□□□□□ -0.08
LMNB1-201ENST00000261366 CDH26Q8IXH8 852 aa14.56□□□□□ -0.08
LMNB1-201ENST00000261366 OR5T3Q8NGG3 340 aa14.56□□□□□ -0.08
LMNB1-201ENST00000261366 SMARCD2Q92925 531 aa14.56□□□□□ -0.08
LMNB1-201ENST00000261366 ZCCHC4Q9H5U6 513 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms