RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 CAPSLQ8WWF8 208 aa3.34□□□□□ -1.88
CCDC54-201ENST00000261058 SLC38A4Q969I6 547 aa3.34□□□□□ -1.88
CCDC54-201ENST00000261058 KIAA1143Q96AT1 154 aaPredicted RBP3.34□□□□□ -1.88
CCDC54-201ENST00000261058 CCT8L2Q96SF2 557 aa3.34□□□□□ -1.88
CCDC54-201ENST00000261058 DHRS9Q9BPW9 319 aa3.34□□□□□ -1.88
CCDC54-201ENST00000261058 CALN1Q9BXU9 219 aa3.34□□□□□ -1.88
CCDC54-201ENST00000261058 LHX5Q9H2C1 402 aa3.34□□□□□ -1.88
CCDC54-201ENST00000261058 SLC38A10Q9HBR0 1119 aa3.34□□□□□ -1.88
CCDC54-201ENST00000261058 NT5MQ9NPB1 228 aa3.34□□□□□ -1.88
CCDC54-201ENST00000261058 DMAP1Q9NPF5 467 aaPredicted RBP3.34□□□□□ -1.88
CCDC54-201ENST00000261058 CUTCQ9NTM9 273 aa3.34□□□□□ -1.88
CCDC54-201ENST00000261058 EURLQ9NYK6 297 aa3.34□□□□□ -1.88
CCDC54-201ENST00000261058 PSMC3IPQ9P2W1 217 aaPredicted RBP3.34□□□□□ -1.88
CCDC54-201ENST00000261058 GHRLQ9UBU3 117 aa3.34□□□□□ -1.88
CCDC54-201ENST00000261058 PISDQ9UG56 409 aa3.34□□□□□ -1.88
CCDC54-201ENST00000261058 ZNF639Q9UID6 485 aa3.34□□□□□ -1.88
CCDC54-201ENST00000261058 AP3M1Q9Y2T2 418 aa3.34□□□□□ -1.88
CCDC54-201ENST00000261058 FAM32AQ9Y421 112 aaKnown RBP3.34□□□□□ -1.88
CCDC54-201ENST00000261058 CPDO75976 1380 aa3.34□□□□□ -1.88
CCDC54-201ENST00000261058 INSRP06213 1382 aa3.34□□□□□ -1.88
CCDC54-201ENST00000261058 PNPLA6Q8IY17 1366 aa3.34□□□□□ -1.88
CCDC54-201ENST00000261058 PPIAL4EA0A075B759 164 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 TRBV11-1A0A0K0K1C0 115 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 METTL21EPA6NDL7 271 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 SMCO2A6NFE2 343 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 MIF4GDA9UHW6 222 aaKnown RBP3.33□□□□□ -1.88
CCDC54-201ENST00000261058 CENPBD1B2RD01 187 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 C11orf98E9PRG8 122 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 H0YJX3 145 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 PGRMC1O00264 195 aaKnown RBP3.33□□□□□ -1.88
CCDC54-201ENST00000261058 FOXE1O00358 373 aaPredicted RBP3.33□□□□□ -1.88
CCDC54-201ENST00000261058 GPR171O14626 319 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 ABCD4O14678 606 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 STX7O15400 261 aaKnown RBP3.33□□□□□ -1.88
CCDC54-201ENST00000261058 ZSCAN12O43309 604 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 NDUFA2O43678 99 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 DUX1O43812 170 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 CCNB2O95067 398 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 NSA2O95478 260 aaKnown RBP3.33□□□□□ -1.88
CCDC54-201ENST00000261058 MBP02144 154 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 FTH1P02794 183 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 GIG44P09565 113 aaPredicted RBP3.33□□□□□ -1.88
CCDC54-201ENST00000261058 UBTFL1P0CB47 393 aaPredicted RBP3.33□□□□□ -1.88
CCDC54-201ENST00000261058 PPIAL4FP0DN26 164 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 CCL2P13500 99 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 CPN1P15169 458 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 TCN1P20061 433 aaPredicted RBP3.33□□□□□ -1.88
CCDC54-201ENST00000261058 SYT1P21579 422 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 CCNE1P24864 410 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 FASP25445 335 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 HMGCLP35914 325 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 RPS6P62753 249 aaKnown RBP3.33□□□□□ -1.88
CCDC54-201ENST00000261058 PMS2P3Q13401 168 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 ART3Q13508 389 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 DGCR6Q14129 220 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 GANABQ14697 944 aaKnown RBP3.33□□□□□ -1.88
CCDC54-201ENST00000261058 TIMM50Q3ZCQ8 353 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 LGSNQ5TDP6 509 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 PNCKQ6P2M8 343 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 TMEM107Q6UX40 140 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 DCXRQ7Z4W1 244 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 VRK2Q86Y07 508 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 IQCKQ8N0W5 287 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 OR13C9Q8NGT0 318 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 MRAPQ8TCY5 172 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 DTX3LQ8TDB6 740 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 VN1R17PQ8TDU5 208 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 ADAMTS16Q8TE57 1224 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 NELFBQ8WX92 580 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 ELMO1Q92556 727 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 RMND5BQ96G75 393 aaPredicted RBP3.33□□□□□ -1.88
CCDC54-201ENST00000261058 VSTM2LQ96N03 204 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 HCAR1Q9BXC0 346 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 BBS2Q9BXC9 721 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 DHX33Q9H6R0 707 aaKnown RBP3.33□□□□□ -1.88
CCDC54-201ENST00000261058 KAT8Q9H7Z6 458 aaKnown RBP3.33□□□□□ -1.88
CCDC54-201ENST00000261058 MEPEQ9NQ76 525 aaPredicted RBP3.33□□□□□ -1.88
CCDC54-201ENST00000261058 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.33□□□□□ -1.88
CCDC54-201ENST00000261058 UFSP2Q9NUQ7 469 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 RHBDL2Q9NX52 303 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 DUS2Q9NX74 493 aaKnown RBP3.33□□□□□ -1.88
CCDC54-201ENST00000261058 RPH3ALQ9UNE2 315 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 PPIAL4AQ9Y536 164 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 NPTNQ9Y639 398 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 SMAD5-AS1Q9Y6J3 95 aa3.33□□□□□ -1.88
CCDC54-201ENST00000261058 PPIAL4CA0A0B4J2A2 164 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 IGHV3-35A0A0C4DH35 117 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 EFCAB10A6NFE3 127 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 OR6C70A6NIJ9 312 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 BTN3A3O00478 584 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 PHOX2AO14813 284 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 NBR2O15453 112 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 OR1F1O43749 312 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 TIMM8AO60220 97 aaPredicted RBP3.32□□□□□ -1.88
CCDC54-201ENST00000261058 JAK2O60674 1132 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 HCN1O60741 890 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 SUPT3HO75486 399 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 OR2F2O95006 317 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 RPP14O95059 124 aaKnown RBP3.32□□□□□ -1.88
CCDC54-201ENST00000261058 AHSA1O95433 338 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms