RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 RPL18Q07020 188 aaKnown RBP14.12□□□□□ -0.15
CCDC90B-201ENST00000260054 ZNF620Q6ZNG0 422 aa14.12□□□□□ -0.15
CCDC90B-201ENST00000260054 KDM8Q8N371 416 aa14.12□□□□□ -0.15
CCDC90B-201ENST00000260054 GALNT4Q8N4A0 578 aa14.12□□□□□ -0.15
CCDC90B-201ENST00000260054 FANK1Q8TC84 345 aa14.12□□□□□ -0.15
CCDC90B-201ENST00000260054 DNAJC9Q8WXX5 260 aa14.12□□□□□ -0.15
CCDC90B-201ENST00000260054 ZHX1-C8orf76Q96EF9 292 aa14.12□□□□□ -0.15
CCDC90B-201ENST00000260054 PLA2G12AQ9BZM1 189 aa14.12□□□□□ -0.15
CCDC90B-201ENST00000260054 ENKD1Q9H0I2 346 aa14.12□□□□□ -0.15
CCDC90B-201ENST00000260054 IL20RAQ9UHF4 553 aa14.12□□□□□ -0.15
CCDC90B-201ENST00000260054 MCTS1Q9ULC4 181 aaKnown RBP14.12□□□□□ -0.15
CCDC90B-201ENST00000260054 POFUT2Q9Y2G5 429 aa14.12□□□□□ -0.15
CCDC90B-201ENST00000260054 KIAA1549Q9HCM3 1950 aa14.11□□□□□ -0.15
CCDC90B-201ENST00000260054 MS4A18H0YCH9 400 aa14.11□□□□□ -0.15
CCDC90B-201ENST00000260054 AQP8O94778 261 aa14.11□□□□□ -0.15
CCDC90B-201ENST00000260054 SYNGR4O95473 234 aa14.11□□□□□ -0.15
CCDC90B-201ENST00000260054 HPRP00739 348 aa14.11□□□□□ -0.15
CCDC90B-201ENST00000260054 ADORA3P0DMS8 318 aa14.11□□□□□ -0.15
CCDC90B-201ENST00000260054 MS4A18Q3C1V0 323 aa14.11□□□□□ -0.15
CCDC90B-201ENST00000260054 ACSF3Q4G176 576 aaPredicted RBP14.11□□□□□ -0.15
CCDC90B-201ENST00000260054 SOWAHCQ53LP3 525 aaPredicted RBP14.11□□□□□ -0.15
CCDC90B-201ENST00000260054 THSD4Q6ZMP0 1018 aa14.11□□□□□ -0.15
CCDC90B-201ENST00000260054 Q6ZPB1 254 aaPredicted RBP14.11□□□□□ -0.15
CCDC90B-201ENST00000260054 PARP8Q8N3A8 854 aa14.11□□□□□ -0.15
CCDC90B-201ENST00000260054 ADPRHL1Q8NDY3 354 aa14.11□□□□□ -0.15
CCDC90B-201ENST00000260054 OR8D4Q8NGM9 314 aa14.11□□□□□ -0.15
CCDC90B-201ENST00000260054 TRIB1Q96RU8 372 aa14.11□□□□□ -0.15
CCDC90B-201ENST00000260054 NAA11Q9BSU3 229 aaPredicted RBP14.11□□□□□ -0.15
CCDC90B-201ENST00000260054 OR52D1Q9H346 318 aa14.11□□□□□ -0.15
CCDC90B-201ENST00000260054 KLHL13Q9P2N7 655 aa14.11□□□□□ -0.15
CCDC90B-201ENST00000260054 B3GAT1Q9P2W7 334 aa14.11□□□□□ -0.15
CCDC90B-201ENST00000260054 CLCF1Q9UBD9 225 aa14.11□□□□□ -0.15
CCDC90B-201ENST00000260054 CDH10Q9Y6N8 788 aa14.11□□□□□ -0.15
CCDC90B-201ENST00000260054 FIGNL2A6NMB9 653 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 C11orf98E9PRG8 122 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 DLGAP1O14490 977 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 WDR1O75083 606 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 C1QL1O75973 258 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 TGM6O95932 706 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 OSMP13725 252 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 AHCYP23526 432 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 RBPJQ06330 500 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 PUDPQ08623 228 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 ANKDD1AQ495B1 522 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 SLC36A3Q495N2 470 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 TMEM225Q6GV28 225 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 ABLIM2Q6H8Q1 611 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 RTL6Q6ICC9 239 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 SMARCD3Q6STE5 483 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 FCRLAQ7L513 359 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 IGFN1Q86VF2 1251 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 DOLPP1Q86YN1 238 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 PACRGLQ8N7B6 248 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 CLDN22Q8N7P3 220 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 LRRC75AQ8NAA5 344 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 RNF128Q8TEB7 428 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 ABHD3Q8WU67 409 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 FANCFQ9NPI8 374 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 IL20Q9NYY1 176 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 ZNF175Q9Y473 711 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 FAM215AQ9Y5M1 114 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 A0A1W2PNV4 684 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 SLC22A20A6NK97 555 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 MCIDASD6RGH6 385 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 PRRG2O14669 202 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 CYTIPO60759 359 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 NDUFB2O95178 105 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 OR6A2O95222 327 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 F13BP05160 661 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 HLA-DOBP13765 273 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 GABRA1P14867 456 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 EPHA2P29317 976 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 POLR2IP36954 125 aaKnown RBP14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 PRPS1P60891 318 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 ZP4Q12836 540 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 RFX4Q33E94 735 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 ALG10Q5BKT4 473 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 RPTNQ6XPR3 784 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 C3P1Q6ZMU1 363 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 GPAT4Q86UL3 456 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 ZNF843Q8N446 348 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 RPRMLQ8N4K4 120 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 SAMD8Q96LT4 415 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 C8orf4Q9NR00 106 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 TINAGQ9UJW2 476 aa14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 RP1L1Q8IWN7 2480 aaPredicted RBP14.1□□□□□ -0.15
CCDC90B-201ENST00000260054 NBASA2RRP1 2371 aa14.09□□□□□ -0.15
CCDC90B-201ENST00000260054 ZNF716A6NP11 495 aa14.09□□□□□ -0.15
CCDC90B-201ENST00000260054 B8ZZF3 427 aa14.09□□□□□ -0.15
CCDC90B-201ENST00000260054 H3BN98 237 aa14.09□□□□□ -0.15
CCDC90B-201ENST00000260054 RNF13O43567 381 aa14.09□□□□□ -0.15
CCDC90B-201ENST00000260054 SERPINI2O75830 405 aa14.09□□□□□ -0.15
CCDC90B-201ENST00000260054 RCBTB2O95199 551 aa14.09□□□□□ -0.15
CCDC90B-201ENST00000260054 SNAP29O95721 258 aa14.09□□□□□ -0.15
CCDC90B-201ENST00000260054 ACVR2AP27037 513 aa14.09□□□□□ -0.15
CCDC90B-201ENST00000260054 TLE1Q04724 770 aa14.09□□□□□ -0.15
CCDC90B-201ENST00000260054 SLC17A1Q14916 467 aa14.09□□□□□ -0.15
CCDC90B-201ENST00000260054 ZIK1Q3SY52 487 aaPredicted RBP14.09□□□□□ -0.15
CCDC90B-201ENST00000260054 CLEC12AQ5QGZ9 265 aa14.09□□□□□ -0.15
CCDC90B-201ENST00000260054 NSUN5P2Q63ZY6 315 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms