RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 PRTGQ2VWP7 1150 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 ZFYVE26Q68DK2 2539 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 GJD3Q8N144 294 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 SLC7A6Q92536 515 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 FYTTD1Q96QD9 318 aaKnown RBP8.28□□□□□ -1.08
CKAP2-201ENST00000258607 OR1F2PQ96R84 312 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 AMELYQ99218 206 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 PITHD1Q9GZP4 211 aaPredicted RBP8.28□□□□□ -1.08
CKAP2-201ENST00000258607 MMP27Q9H306 513 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 TP63Q9H3D4 680 aaPredicted RBP8.28□□□□□ -1.08
CKAP2-201ENST00000258607 SLC25A19Q9HC21 320 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 LAMP5Q9UJQ1 280 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 KLHDC2Q9Y2U9 406 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 ATG2AQ2TAZ0 1938 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 A0A0B4J2E0 115 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 A0A1B0GX12 115 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 A0A1W2PPL8 197 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 PRR19A6NJB7 356 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 TRIM3O75382 744 aaPredicted RBP8.28□□□□□ -1.08
CKAP2-201ENST00000258607 AGR2O95994 175 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 POU2F2P09086 479 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 INHBBP09529 407 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 MYL9P24844 172 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 GDI2P50395 445 aaKnown RBP8.28□□□□□ -1.08
CKAP2-201ENST00000258607 SLC37A1P57057 533 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 SF3A2Q15428 464 aaKnown RBP8.28□□□□□ -1.08
CKAP2-201ENST00000258607 TBC1D25Q3MII6 688 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 C6orf183Q5T699 404 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 FHL5Q5TD97 284 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 TMPRSS12Q86WS5 348 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 ZNF595Q8IYB9 648 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 GALNT6Q8NCL4 622 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 OR5D18Q8NGL1 313 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 S100ZQ8WXG8 99 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 ASB15Q8WXK1 588 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 EDAQ92838 391 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 DAZLQ92904 295 aaKnown RBP8.28□□□□□ -1.08
CKAP2-201ENST00000258607 LCORQ96JN0 433 aaPredicted RBP8.28□□□□□ -1.08
CKAP2-201ENST00000258607 RNF170Q96K19 258 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 G6PC3Q9BUM1 346 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 ALG12Q9BV10 488 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 DEFB126Q9BYW3 111 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 OR51B6Q9H340 312 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 SIAEQ9HAT2 523 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 TRIM36Q9NQ86 728 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 HRH3Q9Y5N1 445 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 PEX16Q9Y5Y5 336 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 CHP2O43745 196 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 FMO6PO60774 539 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 NOS1APO75052 506 aaPredicted RBP8.28□□□□□ -1.08
CKAP2-201ENST00000258607 NKX2-2O95096 273 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 KRT8P05787 483 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 ADRB1P08588 477 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 GP1BBP13224 206 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 GLB1P16278 677 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 AADACL4Q5VUY2 407 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 Q6ZNX1 250 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 CHMP1BQ7LBR1 199 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 NR2C2APQ86WQ0 139 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 PLPP7Q8NBV4 271 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 IFI44Q8TCB0 444 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 THAP4Q8WY91 577 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 TXNDC15Q96J42 360 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 ELL3Q9HB65 397 aaPredicted RBP8.28□□□□□ -1.08
CKAP2-201ENST00000258607 FAIMQ9NVQ4 179 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 BABAM2Q9NXR7 383 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 DIMT1Q9UNQ2 313 aaKnown RBP8.28□□□□□ -1.08
CKAP2-201ENST00000258607 PCDHGA3Q9Y5H0 932 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 A0A1B0GX78 115 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 SUSD5O60279 629 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 MT-ND5P03915 603 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 HLA-DPB1P04440 258 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 TALDO1P37837 337 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 FASLGP48023 281 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 SNRPGP62308 76 aaKnown RBP8.27□□□□□ -1.09
CKAP2-201ENST00000258607 RAB40BQ12829 278 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 ANGPT1Q15389 498 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 TCTE1Q5JU00 501 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 RAET1LQ5VY80 246 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 HEPHL1Q6MZM0 1159 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 PPP1R3BQ86XI6 285 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 SLC35F2Q8IXU6 374 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 LRRC18Q8N456 261 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 ZNF527Q8NB42 609 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 C9orf43Q8TAL5 461 aaPredicted RBP8.27□□□□□ -1.09
CKAP2-201ENST00000258607 GUCD1Q96NT3 240 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 CDCA4Q9BXL8 241 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 C11orf54Q9H0W9 315 aaPredicted RBP8.27□□□□□ -1.09
CKAP2-201ENST00000258607 ENAMQ9NRM1 1142 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 SLC35A3Q9Y2D2 325 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 DSPPQ9NZW4 1301 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 SYT5O00445 386 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 LANCL1O43813 399 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 SLITRK5O94991 958 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 ELK1P19419 428 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 CCNOP22674 350 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 CAPZA2P47755 286 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 CCR6P51684 374 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 GMFBP60983 142 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 UBE2MP61081 183 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms