RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 BCL2L2Q92843 193 aaPredicted RBP18.37■□□□□ 0.53
NEDD8-201ENST00000250495 MAL2Q969L2 176 aa18.37■□□□□ 0.53
NEDD8-201ENST00000250495 C12orf10Q9HB07 376 aa18.37■□□□□ 0.53
NEDD8-201ENST00000250495 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.37■□□□□ 0.53
NEDD8-201ENST00000250495 ARPC4-TTLL3A0A0A6YYG9 625 aa18.36■□□□□ 0.53
NEDD8-201ENST00000250495 IGHV1-18A0A0C4DH31 117 aa18.36■□□□□ 0.53
NEDD8-201ENST00000250495 FTCDNL1E5RQL4 147 aa18.36■□□□□ 0.53
NEDD8-201ENST00000250495 OR2T1O43869 369 aa18.36■□□□□ 0.53
NEDD8-201ENST00000250495 UPK3AO75631 287 aa18.36■□□□□ 0.53
NEDD8-201ENST00000250495 PNMTP11086 282 aa18.36■□□□□ 0.53
NEDD8-201ENST00000250495 ETS2P15036 469 aa18.36■□□□□ 0.53
NEDD8-201ENST00000250495 RPS5P46782 204 aaKnown RBP18.36■□□□□ 0.53
NEDD8-201ENST00000250495 SH3BGRP55822 239 aaPredicted RBP18.36■□□□□ 0.53
NEDD8-201ENST00000250495 HOXC5Q00444 222 aa18.36■□□□□ 0.53
NEDD8-201ENST00000250495 LGALS3BPQ08380 585 aa18.36■□□□□ 0.53
NEDD8-201ENST00000250495 MST1LQ2TV78 715 aa18.36■□□□□ 0.53
NEDD8-201ENST00000250495 C3orf36Q3SXR2 165 aa18.36■□□□□ 0.53
NEDD8-201ENST00000250495 ANKRD16Q6P6B7 361 aa18.36■□□□□ 0.53
NEDD8-201ENST00000250495 SLC2A7Q6PXP3 512 aa18.36■□□□□ 0.53
NEDD8-201ENST00000250495 C5orf46Q6UWT4 87 aa18.36■□□□□ 0.53
NEDD8-201ENST00000250495 KDM8Q8N371 416 aa18.36■□□□□ 0.53
NEDD8-201ENST00000250495 ANKK1Q8NFD2 765 aa18.36■□□□□ 0.53
NEDD8-201ENST00000250495 ALKBH3Q96Q83 286 aaPredicted RBP18.36■□□□□ 0.53
NEDD8-201ENST00000250495 KATNB1Q9BVA0 655 aa18.36■□□□□ 0.53
NEDD8-201ENST00000250495 FKBP7Q9Y680 259 aa18.36■□□□□ 0.53
NEDD8-201ENST00000250495 SHOX2O60902 331 aaPredicted RBP18.35■□□□□ 0.53
NEDD8-201ENST00000250495 PRKAR1BP31321 381 aa18.35■□□□□ 0.53
NEDD8-201ENST00000250495 SERPINF1P36955 418 aa18.35■□□□□ 0.53
NEDD8-201ENST00000250495 MRPL19P49406 292 aaKnown RBP18.35■□□□□ 0.53
NEDD8-201ENST00000250495 CLDN17P56750 224 aa18.35■□□□□ 0.53
NEDD8-201ENST00000250495 SNRPD2P62316 118 aaKnown RBP18.35■□□□□ 0.53
NEDD8-201ENST00000250495 EGR4Q05215 589 aa18.35■□□□□ 0.53
NEDD8-201ENST00000250495 CYB5R2Q6BCY4 276 aa18.35■□□□□ 0.53
NEDD8-201ENST00000250495 NET1Q7Z628 596 aaPredicted RBP18.35■□□□□ 0.53
NEDD8-201ENST00000250495 LSMEM1Q8N8F7 131 aa18.35■□□□□ 0.53
NEDD8-201ENST00000250495 NANOS1Q8WY41 292 aaKnown RBP18.35■□□□□ 0.53
NEDD8-201ENST00000250495 KTI12Q96EK9 354 aaPredicted RBP18.35■□□□□ 0.53
NEDD8-201ENST00000250495 OXGR1Q96P68 337 aa18.35■□□□□ 0.53
NEDD8-201ENST00000250495 KCNK17Q96T54 332 aa18.35■□□□□ 0.53
NEDD8-201ENST00000250495 PTDSS2Q9BVG9 487 aa18.35■□□□□ 0.53
NEDD8-201ENST00000250495 CRNNQ9UBG3 495 aaPredicted RBP18.35■□□□□ 0.53
NEDD8-201ENST00000250495 CDC42EP3Q9UKI2 254 aa18.35■□□□□ 0.53
NEDD8-201ENST00000250495 RCE1Q9Y256 329 aa18.35■□□□□ 0.53
NEDD8-201ENST00000250495 RPL36A-HNRNPH2H7BZ11 118 aa18.34■□□□□ 0.53
NEDD8-201ENST00000250495 NR5A2O00482 541 aa18.34■□□□□ 0.53
NEDD8-201ENST00000250495 TGDSO95455 350 aa18.34■□□□□ 0.53
NEDD8-201ENST00000250495 USF1P22415 310 aaPredicted RBP18.34■□□□□ 0.53
NEDD8-201ENST00000250495 PDLIM4P50479 330 aa18.34■□□□□ 0.53
NEDD8-201ENST00000250495 GYS2P54840 703 aa18.34■□□□□ 0.53
NEDD8-201ENST00000250495 ROR2Q01974 943 aaKnown RBP18.34■□□□□ 0.53
NEDD8-201ENST00000250495 C1DQ13901 141 aaKnown RBP18.34■□□□□ 0.53
NEDD8-201ENST00000250495 C6orf89Q6UWU4 347 aa18.34■□□□□ 0.53
NEDD8-201ENST00000250495 LINGO2Q7L985 606 aa18.34■□□□□ 0.53
NEDD8-201ENST00000250495 FAM169BQ8N8A8 192 aa18.34■□□□□ 0.53
NEDD8-201ENST00000250495 DNAJA4Q8WW22 397 aaPredicted RBP18.34■□□□□ 0.53
NEDD8-201ENST00000250495 SLC38A4Q969I6 547 aa18.34■□□□□ 0.53
NEDD8-201ENST00000250495 SPATA5L1Q9BVQ7 753 aa18.34■□□□□ 0.53
NEDD8-201ENST00000250495 TCF7L2Q9NQB0 619 aa18.34■□□□□ 0.53
NEDD8-201ENST00000250495 CA10Q9NS85 328 aa18.34■□□□□ 0.53
NEDD8-201ENST00000250495 TMEM160Q9NX00 188 aa18.34■□□□□ 0.53
NEDD8-201ENST00000250495 A0A096LPE4 126 aa18.33■□□□□ 0.52
NEDD8-201ENST00000250495 A0A1W2PPZ6 126 aa18.33■□□□□ 0.52
NEDD8-201ENST00000250495 VSTM5A8MXK1 200 aa18.33■□□□□ 0.52
NEDD8-201ENST00000250495 B9A039 149 aa18.33■□□□□ 0.52
NEDD8-201ENST00000250495 NDUFS8O00217 210 aa18.33■□□□□ 0.52
NEDD8-201ENST00000250495 AIM2O14862 343 aa18.33■□□□□ 0.52
NEDD8-201ENST00000250495 SLC43A1O75387 559 aa18.33■□□□□ 0.52
NEDD8-201ENST00000250495 ZNF432O94892 652 aa18.33■□□□□ 0.52
NEDD8-201ENST00000250495 HOXB9P17482 250 aaPredicted RBP18.33■□□□□ 0.52
NEDD8-201ENST00000250495 PPIBP23284 216 aaKnown RBP18.33■□□□□ 0.52
NEDD8-201ENST00000250495 LSM11P83369 360 aaKnown RBP eCLIP18.33■□□□□ 0.52
NEDD8-201ENST00000250495 NAAAQ02083 359 aa18.33■□□□□ 0.52
NEDD8-201ENST00000250495 LRIF1Q5T3J3 769 aa18.33■□□□□ 0.52
NEDD8-201ENST00000250495 FAM69AQ5T7M9 428 aa18.33■□□□□ 0.52
NEDD8-201ENST00000250495 REEP3Q6NUK4 255 aa18.33■□□□□ 0.52
NEDD8-201ENST00000250495 BLOC1S3Q6QNY0 202 aa18.33■□□□□ 0.52
NEDD8-201ENST00000250495 KRT73Q86Y46 540 aa18.33■□□□□ 0.52
NEDD8-201ENST00000250495 OR4F15Q8NGB8 312 aa18.33■□□□□ 0.52
NEDD8-201ENST00000250495 C7orf26Q96N11 449 aa18.33■□□□□ 0.52
NEDD8-201ENST00000250495 FBXO9Q9UK97 447 aaPredicted RBP18.33■□□□□ 0.52
NEDD8-201ENST00000250495 FBN1P35555 2871 aaKnown RBP18.32■□□□□ 0.52
NEDD8-201ENST00000250495 AKAP8O43823 692 aaKnown RBP18.32■□□□□ 0.52
NEDD8-201ENST00000250495 FZD7O75084 574 aa18.32■□□□□ 0.52
NEDD8-201ENST00000250495 PDE5AO76074 875 aa18.32■□□□□ 0.52
NEDD8-201ENST00000250495 LY6HO94772 140 aa18.32■□□□□ 0.52
NEDD8-201ENST00000250495 FAM157CP0CG43 387 aa18.32■□□□□ 0.52
NEDD8-201ENST00000250495 ARAFP10398 606 aa18.32■□□□□ 0.52
NEDD8-201ENST00000250495 CDK6Q00534 326 aa18.32■□□□□ 0.52
NEDD8-201ENST00000250495 GCNT6Q5T4J0 391 aa18.32■□□□□ 0.52
NEDD8-201ENST00000250495 DHRS4L2Q6PKH6 230 aa18.32■□□□□ 0.52
NEDD8-201ENST00000250495 H1FNTQ75WM6 255 aaPredicted RBP18.32■□□□□ 0.52
NEDD8-201ENST00000250495 FUNDC1Q8IVP5 155 aa18.32■□□□□ 0.52
NEDD8-201ENST00000250495 GPR137CQ8N3F9 429 aa18.32■□□□□ 0.52
NEDD8-201ENST00000250495 NFKBIDQ8NI38 313 aa18.32■□□□□ 0.52
NEDD8-201ENST00000250495 TAAR8Q969N4 342 aa18.32■□□□□ 0.52
NEDD8-201ENST00000250495 VRK1Q99986 396 aaPredicted RBP18.32■□□□□ 0.52
NEDD8-201ENST00000250495 BEX2Q9BXY8 128 aa18.32■□□□□ 0.52
NEDD8-201ENST00000250495 SLC25A37Q9NYZ2 338 aa18.32■□□□□ 0.52
NEDD8-201ENST00000250495 SELENONQ9NZV5 590 aa18.32■□□□□ 0.52
NEDD8-201ENST00000250495 TRAV36DV7A0A075B6V5 113 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms