RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 SEC22AQ96IW7 307 aa18.4■□□□□ 0.54
SOX4-201ENST00000244745 IDO2Q6ZQW0 420 aa18.4■□□□□ 0.54
SOX4-201ENST00000244745 CNTNAP3Q9BZ76 1288 aa18.4■□□□□ 0.54
SOX4-201ENST00000244745 HOXB5P09067 269 aa18.39■□□□□ 0.54
SOX4-201ENST00000244745 OTX2P32243 289 aa18.39■□□□□ 0.54
SOX4-201ENST00000244745 CLDN6P56747 220 aa18.39■□□□□ 0.54
SOX4-201ENST00000244745 FAM78AQ5JUQ0 283 aa18.39■□□□□ 0.54
SOX4-201ENST00000244745 PRSS45Q7RTY3 260 aa18.39■□□□□ 0.54
SOX4-201ENST00000244745 FRZBQ92765 325 aa18.39■□□□□ 0.54
SOX4-201ENST00000244745 C1QTNF3Q9BXJ4 246 aa18.39■□□□□ 0.54
SOX4-201ENST00000244745 PIPP12273 146 aaPredicted RBP18.39■□□□□ 0.53
SOX4-201ENST00000244745 F3P13726 295 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 MAKP20794 623 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 PER3P56645 1201 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 ZFP82Q8N141 532 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 OR52N1Q8NH53 320 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 NKX6-2Q9C056 277 aaPredicted RBP18.39■□□□□ 0.53
SOX4-201ENST00000244745 CD79BP40259 229 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 PPT1P50897 306 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 SLC48A1Q6P1K1 146 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 TMPPEQ6ZT21 453 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 RRNAD1Q96FB5 475 aaKnown RBP18.39■□□□□ 0.53
SOX4-201ENST00000244745 SLC6A20Q9NP91 592 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 PRSS16Q9NQE7 514 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 GDE1Q9NZC3 331 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 A0A0A6YYJ9 748 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 TMEM212A6NML5 194 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 TARM1B6A8C7 271 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 BRINP1O60477 761 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 MSX1P28360 303 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 RAB4BP61018 213 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 CSNK1G2P78368 415 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 ADAMTSL4Q6UY14 1074 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 SLC19A3Q9BZV2 496 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 HHATLQ9HCP6 504 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 SELENOFO60613 162 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 CLVS2Q5SYC1 327 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 RTN4RL1Q86UN2 441 aaPredicted RBP18.39■□□□□ 0.53
SOX4-201ENST00000244745 SLC51BQ86UW2 128 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 LIN7BQ9HAP6 207 aa18.39■□□□□ 0.53
SOX4-201ENST00000244745 A0A1W2PS29 197 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 K7ESM1 405 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 SYT5O00445 386 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 ZNF217O75362 1048 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 HTR3AP46098 478 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 SELENBP1Q13228 472 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 TECPR1Q7Z6L1 1165 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 ZBTB44Q8NCP5 570 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 SGCZQ96LD1 299 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 AKR7A2O43488 359 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 SUSD5O60279 629 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 B4GALT3O60512 393 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 EMP2P54851 167 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 POU3F1Q03052 451 aaPredicted RBP18.38■□□□□ 0.53
SOX4-201ENST00000244745 SULF2Q8IWU5 870 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 STRADBQ9C0K7 418 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 A0A1B0GWA3 101 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 CIB4A0PJX0 185 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 SULT2B1O00204 365 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 PTBP1P26599 531 aaKnown RBP eCLIP18.38■□□□□ 0.53
SOX4-201ENST00000244745 SLC2A12Q8TD20 617 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 DVL3Q92997 716 aaPredicted RBP18.38■□□□□ 0.53
SOX4-201ENST00000244745 WBP2Q969T9 261 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 ZNF566Q969W8 418 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 HHIPL1Q96JK4 782 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 EHFQ9NZC4 300 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 CAMK2AQ9UQM7 478 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 GJE1A6NN92 205 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 HMGN4O00479 90 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 MAN2B1O00754 1011 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 RSPO2Q6UXX9 243 aaPredicted RBP18.38■□□□□ 0.53
SOX4-201ENST00000244745 DUSP3P51452 185 aaPredicted RBP18.38■□□□□ 0.53
SOX4-201ENST00000244745 OR1S1Q8NH92 325 aa18.38■□□□□ 0.53
SOX4-201ENST00000244745 TOE1Q96GM8 510 aaKnown RBP18.38■□□□□ 0.53
SOX4-201ENST00000244745 TRABD2BA6NFA1 517 aa18.37■□□□□ 0.53
SOX4-201ENST00000244745 SERINC4A6NH21 518 aa18.37■□□□□ 0.53
SOX4-201ENST00000244745 ZNF264O43296 627 aa18.37■□□□□ 0.53
SOX4-201ENST00000244745 CPEP16870 476 aa18.37■□□□□ 0.53
SOX4-201ENST00000244745 NKAIN4Q8IVV8 208 aa18.37■□□□□ 0.53
SOX4-201ENST00000244745 OR51Q1Q8NH59 317 aa18.37■□□□□ 0.53
SOX4-201ENST00000244745 TCEAL2Q9H3H9 227 aaPredicted RBP18.37■□□□□ 0.53
SOX4-201ENST00000244745 A0A0U1RQK1 487 aa18.37■□□□□ 0.53
SOX4-201ENST00000244745 BLACEA4D250 179 aa18.37■□□□□ 0.53
SOX4-201ENST00000244745 ELK1P19419 428 aa18.37■□□□□ 0.53
SOX4-201ENST00000244745 DRD1P21728 446 aa18.37■□□□□ 0.53
SOX4-201ENST00000244745 TACR3P29371 465 aa18.37■□□□□ 0.53
SOX4-201ENST00000244745 GLCCI1Q86VQ1 547 aa18.37■□□□□ 0.53
SOX4-201ENST00000244745 RHNO1Q9BSD3 238 aa18.37■□□□□ 0.53
SOX4-201ENST00000244745 NDUFB11Q9NX14 153 aa18.37■□□□□ 0.53
SOX4-201ENST00000244745 LUZP4Q9P127 313 aa18.37■□□□□ 0.53
SOX4-201ENST00000244745 NME2P22392 152 aa18.37■□□□□ 0.53
SOX4-201ENST00000244745 CTHP32929 405 aa18.37■□□□□ 0.53
SOX4-201ENST00000244745 AFF3P51826 1226 aaKnown RBP18.37■□□□□ 0.53
SOX4-201ENST00000244745 Q499Y3 187 aa18.37■□□□□ 0.53
SOX4-201ENST00000244745 FAM57BQ71RH2 274 aa18.37■□□□□ 0.53
SOX4-201ENST00000244745 HHIPQ96QV1 700 aa18.37■□□□□ 0.53
SOX4-201ENST00000244745 OR10A5Q9H207 317 aa18.37■□□□□ 0.53
SOX4-201ENST00000244745 OR10A2Q9H208 303 aa18.37■□□□□ 0.53
SOX4-201ENST00000244745 UBQLN3Q9H347 655 aa18.37■□□□□ 0.53
SOX4-201ENST00000244745 EPHX3Q9H6B9 360 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms