RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 GPR27Q9NS67 375 aa13.14□□□□□ -0.31
HIF3A-202ENST00000244303 ANKRD10Q9NXR5 420 aa13.14□□□□□ -0.31
HIF3A-202ENST00000244303 COPZ2Q9P299 210 aa13.14□□□□□ -0.31
HIF3A-202ENST00000244303 ZNF346Q9UL40 294 aaKnown RBP13.14□□□□□ -0.31
HIF3A-202ENST00000244303 BLOC1S5-TXNDC5H3BN57 136 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 GSTZ1O43708 216 aaPredicted RBP13.13□□□□□ -0.31
HIF3A-202ENST00000244303 GPRIN2O60269 458 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 LINC01590Q5TEZ4 76 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 CD276Q5ZPR3 534 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 SLC38A6Q8IZM9 456 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 ZNF687Q8N1G0 1237 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 ZNF431Q8TF32 576 aaPredicted RBP13.13□□□□□ -0.31
HIF3A-202ENST00000244303 SMIM4Q8WVI0 70 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 GCDHQ92947 438 aaPredicted RBP13.13□□□□□ -0.31
HIF3A-202ENST00000244303 KLHDC7BQ96G42 594 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 Q96M85 177 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 EMC7Q9NPA0 242 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 B3GNT2Q9NY97 397 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 SPEF1Q9Y4P9 236 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 GON4LQ3T8J9 2241 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 A0A087WV48 116 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 LOC105371267A0A1B0GV96 52 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 A0A1W2PPC4 97 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 CLDN4O14493 209 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 CTDSPLO15194 276 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 GLCEO94923 617 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 H2AFB2P0C5Z0 115 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 ANXA3P12429 323 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 GDNFP39905 211 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 AQP2P41181 271 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 CDKN2AP42771 156 aaKnown RBP13.13□□□□□ -0.31
HIF3A-202ENST00000244303 PRPS1P60891 318 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 FUT7Q11130 342 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 SNTB2Q13425 540 aaKnown RBP13.13□□□□□ -0.31
HIF3A-202ENST00000244303 GSG1Q2KHT4 349 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 FAM199XQ6PEV8 388 aaPredicted RBP13.13□□□□□ -0.31
HIF3A-202ENST00000244303 OR8H3Q8N146 312 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 ZNF433Q8N7K0 673 aaPredicted RBP13.13□□□□□ -0.31
HIF3A-202ENST00000244303 BEST4Q8NFU0 473 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 GIMAP1Q8WWP7 306 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 RLN3Q8WXF3 142 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 RGP1Q92546 391 aaPredicted RBP13.13□□□□□ -0.31
HIF3A-202ENST00000244303 OMA1Q96E52 524 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 MRPL48Q96GC5 212 aaKnown RBP13.13□□□□□ -0.31
HIF3A-202ENST00000244303 MS4A3Q96HJ5 214 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 TSSK2Q96PF2 358 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 C7orf50Q9BRJ6 194 aaKnown RBP13.13□□□□□ -0.31
HIF3A-202ENST00000244303 ALG12Q9BV10 488 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 MRPL15Q9P015 296 aaKnown RBP13.13□□□□□ -0.31
HIF3A-202ENST00000244303 MGAT4AQ9UM21 535 aa13.13□□□□□ -0.31
HIF3A-202ENST00000244303 ELOA3DA6NLF2 546 aaPredicted RBP13.12□□□□□ -0.31
HIF3A-202ENST00000244303 ZFPL1O95159 310 aa13.12□□□□□ -0.31
HIF3A-202ENST00000244303 IFNA16P05015 189 aa13.12□□□□□ -0.31
HIF3A-202ENST00000244303 POU3F3P20264 500 aaPredicted RBP13.12□□□□□ -0.31
HIF3A-202ENST00000244303 IGFBP4P22692 258 aa13.12□□□□□ -0.31
HIF3A-202ENST00000244303 MAZP56270 477 aaKnown RBP13.12□□□□□ -0.31
HIF3A-202ENST00000244303 HSF2Q03933 536 aa13.12□□□□□ -0.31
HIF3A-202ENST00000244303 CD226Q15762 336 aa13.12□□□□□ -0.31
HIF3A-202ENST00000244303 ST3GAL2Q16842 350 aa13.12□□□□□ -0.31
HIF3A-202ENST00000244303 ISXQ2M1V0 245 aa13.12□□□□□ -0.31
HIF3A-202ENST00000244303 ELOA3BQ3SY89 546 aa13.12□□□□□ -0.31
HIF3A-202ENST00000244303 BTN2A1Q7KYR7 527 aa13.12□□□□□ -0.31
HIF3A-202ENST00000244303 LINGO2Q7L985 606 aa13.12□□□□□ -0.31
HIF3A-202ENST00000244303 PARGQ86W56 976 aa13.12□□□□□ -0.31
HIF3A-202ENST00000244303 FAM160A2Q8N612 972 aaPredicted RBP13.12□□□□□ -0.31
HIF3A-202ENST00000244303 ZNF615Q8N8J6 731 aa13.12□□□□□ -0.31
HIF3A-202ENST00000244303 ZNF511Q8NB15 262 aa13.12□□□□□ -0.31
HIF3A-202ENST00000244303 ELOA3Q8NG57 546 aa13.12□□□□□ -0.31
HIF3A-202ENST00000244303 RPS4Y2Q8TD47 263 aa13.12□□□□□ -0.31
HIF3A-202ENST00000244303 RNF166Q96A37 237 aaPredicted RBP13.12□□□□□ -0.31
HIF3A-202ENST00000244303 MSANTD3Q96H12 275 aa13.12□□□□□ -0.31
HIF3A-202ENST00000244303 GPX7Q96SL4 187 aaPredicted RBP13.12□□□□□ -0.31
HIF3A-202ENST00000244303 MAP3K3Q99759 626 aa13.12□□□□□ -0.31
HIF3A-202ENST00000244303 ZNF281Q9Y2X9 895 aa13.12□□□□□ -0.31
HIF3A-202ENST00000244303 IFITM5A6NNB3 132 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 OIP5O43482 229 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 GRK6P43250 576 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 CCR4P51679 360 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 AP2S1P53680 142 aaPredicted RBP13.11□□□□□ -0.31
HIF3A-202ENST00000244303 SKP1P63208 163 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 DYRK1AQ13627 763 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.11□□□□□ -0.31
HIF3A-202ENST00000244303 KLHL26Q53HC5 615 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 ZBTB37Q5TC79 503 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 SLC22A10Q63ZE4 541 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 C10orf53Q8N6V4 93 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 OR11H4Q8NGC9 324 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 PHYHIPQ92561 330 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 DACT3Q96B18 629 aaPredicted RBP13.11□□□□□ -0.31
HIF3A-202ENST00000244303 MMABQ96EY8 250 aaPredicted RBP13.11□□□□□ -0.31
HIF3A-202ENST00000244303 MOGAT1Q96PD6 335 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 SLC19A3Q9BZV2 496 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 TSPAN10Q9H1Z9 355 aaPredicted RBP13.11□□□□□ -0.31
HIF3A-202ENST00000244303 RANBP3Q9H6Z4 567 aaPredicted RBP13.11□□□□□ -0.31
HIF3A-202ENST00000244303 BEX1Q9HBH7 125 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 RXFP3Q9NSD7 469 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 TMEM184BQ9Y519 407 aaPredicted RBP13.11□□□□□ -0.31
HIF3A-202ENST00000244303 NUP210LQ5VU65 1888 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 VCANP13611 3396 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 AIPO00170 330 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms