RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 SLC10A3P09131 477 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 SLC2A1P11166 492 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 ZNF28P17035 718 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 CR2P20023 1033 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 PTGER1P34995 402 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 SNTB1Q13884 538 aaKnown RBP12.9□□□□□ -0.34
TARDBP-201ENST00000240185 OXA1LQ15070 435 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 OR1Q1Q15612 314 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 DEFB110Q30KQ9 67 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 Q499Y3 187 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 GPRIN1Q7Z2K8 1008 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 SIGLECL1Q8N7X8 197 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 TVP23CQ96ET8 276 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 UBL7Q96S82 380 aaPredicted RBP12.9□□□□□ -0.34
TARDBP-201ENST00000240185 NKX3-1Q99801 234 aaPredicted RBP12.9□□□□□ -0.34
TARDBP-201ENST00000240185 CTRCQ99895 268 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 DHRS9Q9BPW9 319 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 EMCNQ9ULC0 261 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 GPR34Q9UPC5 381 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 A3GALT2U3KPV4 340 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 RNGTTO60942 597 aaKnown RBP12.9□□□□□ -0.34
TARDBP-201ENST00000240185 F10P00742 488 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 CD68P34810 354 aaPredicted RBP12.9□□□□□ -0.34
TARDBP-201ENST00000240185 BIDP55957 195 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 SMAD2Q15796 467 aaKnown RBP12.9□□□□□ -0.34
TARDBP-201ENST00000240185 LPCAT3Q6P1A2 487 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 CPEB2Q7Z5Q1 589 aaKnown RBP12.9□□□□□ -0.34
TARDBP-201ENST00000240185 TMEM18Q96B42 140 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 EGLN2Q96KS0 407 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 BCL9LQ86UU0 1499 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 DCTN6O00399 190 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 ELAVL3Q14576 367 aaKnown RBP12.9□□□□□ -0.34
TARDBP-201ENST00000240185 SYPL1Q16563 259 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 SYT6Q5T7P8 510 aaPredicted RBP12.9□□□□□ -0.34
TARDBP-201ENST00000240185 USP53Q70EK8 1073 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 FAM57BQ71RH2 274 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 KCNG3Q8TAE7 436 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 ZNF596Q8TC21 504 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 NEIL2Q969S2 332 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 OPA3Q9H6K4 179 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 TMEM231Q9H6L2 316 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 MED17Q9NVC6 651 aa12.9□□□□□ -0.34
TARDBP-201ENST00000240185 DVL1O14640 695 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 NME2P1O60361 137 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 RAF1P04049 648 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 FCGR2AP12318 317 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 ZNF26P17031 533 aaPredicted RBP12.89□□□□□ -0.35
TARDBP-201ENST00000240185 S100A7P31151 101 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 LIPAP38571 399 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 DVL1P1P54792 670 aaPredicted RBP12.89□□□□□ -0.35
TARDBP-201ENST00000240185 GLYR1Q49A26 553 aaPredicted RBP12.89□□□□□ -0.35
TARDBP-201ENST00000240185 PLAC9Q5JTB6 97 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 HRASLSQ9HDD0 168 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 CCSO14618 274 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 CSO75390 466 aaKnown RBP12.89□□□□□ -0.35
TARDBP-201ENST00000240185 GIPP09681 153 aaPredicted RBP12.89□□□□□ -0.35
TARDBP-201ENST00000240185 CT45A6P0DMU7 189 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 CT45A5P0DMU8 189 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 CT45A7P0DMV0 189 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 CT45A8P0DMV1 189 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 CT45A9P0DMV2 189 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 OPRD1P41143 372 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 MTCP1P56278 107 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 PDE7AQ13946 482 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 CT45A2Q5DJT8 189 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 CT45A1Q5HYN5 189 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 BPIFCQ8NFQ6 507 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 OR13C2Q8NGS9 318 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 AKR7LQ8NHP1 331 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 CT45A3Q8NHU0 189 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 NTMT1Q9BV86 223 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 TM7SF3Q9NS93 570 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 TAS2R5Q9NYW4 299 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 TRAPPC2LQ9UL33 140 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 SRP9P49458 86 aaKnown RBP12.89□□□□□ -0.35
TARDBP-201ENST00000240185 VASPP50552 380 aaPredicted RBP12.89□□□□□ -0.35
TARDBP-201ENST00000240185 TMEM88Q6PEY1 159 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 ZNF561Q8N587 486 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 OR5AR1Q8NGP9 310 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 HRASLS5Q96KN8 279 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 OR52A1Q9UKL2 312 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 DIMT1Q9UNQ2 313 aaKnown RBP12.89□□□□□ -0.35
TARDBP-201ENST00000240185 MCRIP1C9JLW8 97 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 F13BP05160 661 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 ALDOCP09972 364 aaKnown RBP12.89□□□□□ -0.35
TARDBP-201ENST00000240185 OR2T7P0C7T2 308 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 HLA-FP30511 346 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 PTTG1IPP53801 180 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 H3F3AP84243 136 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 CNKSR3Q6P9H4 555 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 OR4N2Q8NGD1 307 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 OR2T27Q8NH04 317 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 CD99L2Q8TCZ2 262 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 UBXN10Q96LJ8 280 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 ZMAT3Q9HA38 289 aaKnown RBP12.89□□□□□ -0.35
TARDBP-201ENST00000240185 ZNF443Q9Y2A4 671 aaPredicted RBP12.89□□□□□ -0.35
TARDBP-201ENST00000240185 MRPS28Q9Y2Q9 187 aaKnown RBP12.89□□□□□ -0.35
TARDBP-201ENST00000240185 SPO11Q9Y5K1 396 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 NUMA1Q14980 2115 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 TMEM200CA6NKL6 621 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms