RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 OR1N1Q8NGS0 311 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 OR6K6Q8NGW6 343 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 GUCD1Q96NT3 240 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 THAP7Q9BT49 309 aaPredicted RBP14.72□□□□□ -0.05
UBE3D-201ENST00000237186 NDEL1Q9GZM8 345 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 FKRPQ9H9S5 495 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 RXFP3Q9NSD7 469 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 WDR70Q9NW82 654 aa14.72□□□□□ -0.05
UBE3D-201ENST00000237186 A0A1B0GX78 115 aa14.71□□□□□ -0.05
UBE3D-201ENST00000237186 OR6C76A6NM76 312 aa14.71□□□□□ -0.05
UBE3D-201ENST00000237186 FZD7O75084 574 aa14.71□□□□□ -0.05
UBE3D-201ENST00000237186 PSKH1P11801 424 aa14.71□□□□□ -0.05
UBE3D-201ENST00000237186 INPP1P49441 399 aa14.71□□□□□ -0.05
UBE3D-201ENST00000237186 IFITM2Q01629 132 aa14.71□□□□□ -0.05
UBE3D-201ENST00000237186 MRPL28Q13084 256 aaKnown RBP14.71□□□□□ -0.05
UBE3D-201ENST00000237186 NSDHLQ15738 373 aa14.71□□□□□ -0.05
UBE3D-201ENST00000237186 VWA2Q5GFL6 755 aa14.71□□□□□ -0.05
UBE3D-201ENST00000237186 GPR139Q6DWJ6 353 aa14.71□□□□□ -0.05
UBE3D-201ENST00000237186 WDR74Q6RFH5 385 aaPredicted RBP14.71□□□□□ -0.05
UBE3D-201ENST00000237186 IL20RBQ6UXL0 311 aa14.71□□□□□ -0.05
UBE3D-201ENST00000237186 SLC35F3Q8IY50 421 aa14.71□□□□□ -0.05
UBE3D-201ENST00000237186 C10orf53Q8N6V4 93 aa14.71□□□□□ -0.05
UBE3D-201ENST00000237186 ZNF441Q8N8Z8 693 aa14.71□□□□□ -0.05
UBE3D-201ENST00000237186 PLPP5Q8NEB5 264 aa14.71□□□□□ -0.05
UBE3D-201ENST00000237186 ZNF563Q8TA94 476 aa14.71□□□□□ -0.05
UBE3D-201ENST00000237186 RNF166Q96A37 237 aaPredicted RBP14.71□□□□□ -0.05
UBE3D-201ENST00000237186 KTI12Q96EK9 354 aaPredicted RBP14.71□□□□□ -0.05
UBE3D-201ENST00000237186 ABHD1Q96SE0 405 aa14.71□□□□□ -0.05
UBE3D-201ENST00000237186 RTN4RQ9BZR6 473 aa14.71□□□□□ -0.05
UBE3D-201ENST00000237186 WWTR1Q9GZV5 400 aa14.71□□□□□ -0.05
UBE3D-201ENST00000237186 NLKQ9UBE8 527 aa14.71□□□□□ -0.05
UBE3D-201ENST00000237186 A8MU76 341 aa14.7□□□□□ -0.06
UBE3D-201ENST00000237186 ZNF879B4DU55 563 aa14.7□□□□□ -0.06
UBE3D-201ENST00000237186 RGS13O14921 159 aa14.7□□□□□ -0.06
UBE3D-201ENST00000237186 CDC40O60508 579 aaKnown RBP eCLIP14.7□□□□□ -0.06
UBE3D-201ENST00000237186 CPNE3O75131 537 aaKnown RBP14.7□□□□□ -0.06
UBE3D-201ENST00000237186 PAHP00439 452 aa14.7□□□□□ -0.06
UBE3D-201ENST00000237186 TFPIP10646 304 aa14.7□□□□□ -0.06
UBE3D-201ENST00000237186 ATF1P18846 271 aa14.7□□□□□ -0.06
UBE3D-201ENST00000237186 SLC6A1P30531 599 aa14.7□□□□□ -0.06
UBE3D-201ENST00000237186 CSF2RBP32927 897 aa14.7□□□□□ -0.06
UBE3D-201ENST00000237186 AFF3P51826 1226 aaKnown RBP14.7□□□□□ -0.06
UBE3D-201ENST00000237186 PNLIPRP2P54317 469 aa14.7□□□□□ -0.06
UBE3D-201ENST00000237186 RPL18Q07020 188 aaKnown RBP14.7□□□□□ -0.06
UBE3D-201ENST00000237186 HSD17B12Q53GQ0 312 aa14.7□□□□□ -0.06
UBE3D-201ENST00000237186 YIF1BQ5BJH7 314 aa14.7□□□□□ -0.06
UBE3D-201ENST00000237186 PRAMEF17Q5VTA0 474 aa14.7□□□□□ -0.06
UBE3D-201ENST00000237186 HLA-DQA1Q5Y7H0 255 aa14.7□□□□□ -0.06
UBE3D-201ENST00000237186 TIGD4Q8IY51 512 aa14.7□□□□□ -0.06
UBE3D-201ENST00000237186 SIX5Q8N196 739 aa14.7□□□□□ -0.06
UBE3D-201ENST00000237186 LSM14AQ8ND56 463 aaKnown RBP14.7□□□□□ -0.06
UBE3D-201ENST00000237186 TAAR8Q969N4 342 aa14.7□□□□□ -0.06
UBE3D-201ENST00000237186 RFT1Q96AA3 541 aa14.7□□□□□ -0.06
UBE3D-201ENST00000237186 ZNF501Q96CX3 271 aaPredicted RBP14.7□□□□□ -0.06
UBE3D-201ENST00000237186 GAL3ST4Q96RP7 486 aa14.7□□□□□ -0.06
UBE3D-201ENST00000237186 MNTQ99583 582 aa14.7□□□□□ -0.06
UBE3D-201ENST00000237186 TTTY10Q9BZA0 68 aa14.7□□□□□ -0.06
UBE3D-201ENST00000237186 CCDC86Q9H6F5 360 aaKnown RBP14.7□□□□□ -0.06
UBE3D-201ENST00000237186 RPRD1BQ9NQG5 326 aaKnown RBP14.7□□□□□ -0.06
UBE3D-201ENST00000237186 NUFIP1Q9UHK0 495 aaKnown RBP14.7□□□□□ -0.06
UBE3D-201ENST00000237186 ZNF281Q9Y2X9 895 aa14.7□□□□□ -0.06
UBE3D-201ENST00000237186 THADAQ6YHU6 1953 aa14.7□□□□□ -0.06
UBE3D-201ENST00000237186 CENPXA8MT69 81 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 BCAT2O15382 392 aaPredicted RBP14.69□□□□□ -0.06
UBE3D-201ENST00000237186 UBL3O95164 117 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 TACSTD2P09758 323 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 AHCYP23526 432 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 IL12BP29460 328 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 MMP15P51511 669 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 ZP2Q05996 745 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 TATDN3Q17R31 274 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 ZFP69Q49AA0 526 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 ZNF57Q68EA5 555 aaPredicted RBP14.69□□□□□ -0.06
UBE3D-201ENST00000237186 PRR22Q8IZ63 422 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 GHDCQ8N2G8 530 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 KLHDC3Q9BQ90 382 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 GRHPRQ9UBQ7 328 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 COPS7AQ9UBW8 275 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 SPATA2Q9UM82 520 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 HCRTR2O43614 444 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 NDUFB5O43674 189 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 LANCL1O43813 399 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 BGLAPP02818 100 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 SRMP19623 302 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 BCKDHBP21953 392 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 NR0B1P51843 470 aaKnown RBP14.69□□□□□ -0.06
UBE3D-201ENST00000237186 BTG1P62324 171 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 SNAP47Q5SQN1 464 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 LYPD4Q6UWN0 246 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 SLC29A4Q7RTT9 530 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 NANOGNBQ7Z5D8 188 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 ZNF511Q8NB15 262 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 OR5H6Q8NGV6 325 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 OR2T4Q8NH00 348 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 CLDN23Q96B33 292 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 CREB3L1Q96BA8 519 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 UPRTQ96BW1 309 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 OR14A2Q96R54 314 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 PDCD1LG2Q9BQ51 273 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 VN1R1Q9GZP7 353 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms