RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 OR8S1Q8NH09 359 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 DNAJA3Q96EY1 480 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 HS6ST2Q96MM7 605 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 C1QTNF2Q9BXJ5 285 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 AICDAQ9GZX7 198 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 OR52A5Q9H2C5 316 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 CHRDQ9H2X0 955 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 BCL2L10Q9HD36 194 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 SPHK2Q9NRA0 654 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 SDHAF3Q9NRP4 125 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 PCDHGA5Q9Y5G8 931 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 ZNF780BQ9Y6R6 833 aa13.03□□□□□ -0.32
PCDHB3-201ENST00000231130 PMS2P1A4D2B8 440 aa13.02□□□□□ -0.32
PCDHB3-201ENST00000231130 KLF9Q13886 244 aaPredicted RBP13.02□□□□□ -0.32
PCDHB3-201ENST00000231130 SSX2Q16385 188 aa13.02□□□□□ -0.32
PCDHB3-201ENST00000231130 YOD1Q5VVQ6 348 aaPredicted RBP13.02□□□□□ -0.32
PCDHB3-201ENST00000231130 CDK20Q8IZL9 346 aa13.02□□□□□ -0.32
PCDHB3-201ENST00000231130 SHISA5Q8N114 240 aa13.02□□□□□ -0.32
PCDHB3-201ENST00000231130 ZNF565Q8N9K5 539 aa13.02□□□□□ -0.32
PCDHB3-201ENST00000231130 ZNF558Q96NG5 402 aa13.02□□□□□ -0.32
PCDHB3-201ENST00000231130 NOX4Q9NPH5 578 aa13.02□□□□□ -0.32
PCDHB3-201ENST00000231130 NPDC1Q9NQX5 325 aaPredicted RBP13.02□□□□□ -0.32
PCDHB3-201ENST00000231130 AKAP7Q9P0M2 348 aaPredicted RBP13.02□□□□□ -0.32
PCDHB3-201ENST00000231130 TRPM6Q9BX84 2022 aa13.02□□□□□ -0.33
PCDHB3-201ENST00000231130 ZNF879B4DU55 563 aa13.02□□□□□ -0.33
PCDHB3-201ENST00000231130 PYCARD-AS1I3L0S3 204 aa13.02□□□□□ -0.33
PCDHB3-201ENST00000231130 PEX12O00623 359 aa13.02□□□□□ -0.33
PCDHB3-201ENST00000231130 AGPAT2O15120 278 aa13.02□□□□□ -0.33
PCDHB3-201ENST00000231130 EMC8O43402 210 aa13.02□□□□□ -0.33
PCDHB3-201ENST00000231130 SLC25A12O75746 678 aa13.02□□□□□ -0.33
PCDHB3-201ENST00000231130 SC5DO75845 299 aa13.02□□□□□ -0.33
PCDHB3-201ENST00000231130 KRT33AO76009 404 aa13.02□□□□□ -0.33
PCDHB3-201ENST00000231130 IL9P15248 144 aa13.02□□□□□ -0.33
PCDHB3-201ENST00000231130 FXYD6P3P58550 94 aa13.02□□□□□ -0.33
PCDHB3-201ENST00000231130 ZNF85Q03923 595 aa13.02□□□□□ -0.33
PCDHB3-201ENST00000231130 ZNF234Q14588 700 aa13.02□□□□□ -0.33
PCDHB3-201ENST00000231130 USF2Q15853 346 aaPredicted RBP13.02□□□□□ -0.33
PCDHB3-201ENST00000231130 TMEM44Q2T9K0 475 aa13.02□□□□□ -0.33
PCDHB3-201ENST00000231130 HACD4Q5VWC8 232 aa13.02□□□□□ -0.33
PCDHB3-201ENST00000231130 TCEAL8Q8IYN2 117 aa13.02□□□□□ -0.33
PCDHB3-201ENST00000231130 DUSP19Q8WTR2 217 aa13.02□□□□□ -0.33
PCDHB3-201ENST00000231130 FCAMRQ8WWV6 532 aa13.02□□□□□ -0.33
PCDHB3-201ENST00000231130 PPP1R16AQ96I34 528 aa13.02□□□□□ -0.33
PCDHB3-201ENST00000231130 TNFRSF13CQ96RJ3 184 aa13.02□□□□□ -0.33
PCDHB3-201ENST00000231130 FBXL3Q9UKT7 428 aa13.02□□□□□ -0.33
PCDHB3-201ENST00000231130 PLEKHA6Q9Y2H5 1048 aa13.02□□□□□ -0.33
PCDHB3-201ENST00000231130 MYO9BQ13459 2157 aa13.02□□□□□ -0.33
PCDHB3-201ENST00000231130 BCL6P41182 706 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 MAPK14Q16539 360 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 DECR1Q16698 335 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 TSSK4Q6SA08 328 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 OR2W3Q7Z3T1 314 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 MRGPREQ86SM8 312 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 EIF4E3Q8N5X7 224 aaKnown RBP13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 OR2L2Q8NH16 312 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 TMEM239Q8WW34 195 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 ZDHHC12Q96GR4 267 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 SEC22AQ96IW7 307 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 MEGF10Q96KG7 1140 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 LMLNQ96KR4 655 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 RBM14Q96PK6 669 aaKnown RBP13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 PBX4Q9BYU1 374 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 PIGMQ9H3S5 423 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 SYNDIG1Q9H7V2 258 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 C2orf42Q9NWW7 574 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 RHPN2P1A8MT19 583 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 PLPP2O43688 288 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 SNRNP200O75643 2136 aaKnown RBP13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 PCDH8O95206 1070 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 HIST1H1TP22492 207 aaPredicted RBP13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 MAT2AP31153 395 aaKnown RBP13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 RAB2AP61019 212 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 RPS15P62841 145 aaKnown RBP13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 MAT1AQ00266 395 aaKnown RBP13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 RIPPLY1Q0D2K3 151 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 FNDC3BQ53EP0 1204 aaKnown RBP13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 TMEM69Q5SWH9 247 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 FAM69AQ5T7M9 428 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 OTPQ5XKR4 325 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 ZNF836Q6ZNA1 936 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 BEST3Q8N1M1 668 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 OR56A1Q8NGH5 318 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 BPIFA2Q96DR5 249 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 PGLYRP3Q96LB9 341 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 GAREM1Q9H706 876 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 MEPEQ9NQ76 525 aaPredicted RBP13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 CAMK2AQ9UQM7 478 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 ZNF443Q9Y2A4 671 aaPredicted RBP13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 KIF26AQ9ULI4 1882 aaPredicted RBP13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 MEX3AA1L020 520 aaKnown RBP13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 SLC22A31A6NKX4 558 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 C2orf74A8MZ97 194 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 GP1BAP07359 652 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 WASP42768 502 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 EPHA4P54764 986 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 OR2B8PP59922 312 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 SLC7A9P82251 487 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 FRRS1Q6ZNA5 592 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 NUDT18Q6ZVK8 323 aa13.01□□□□□ -0.33
PCDHB3-201ENST00000231130 SLC29A4Q7RTT9 530 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms