RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 TBC1D3DA0A087WVF3 549 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 TBC1D3IA0A087WXS9 549 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 TBC1D3EA0A087X179 549 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 TBC1D3KA0A087X1G2 549 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 TBC1D3BA6NDS4 549 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 TBC1D3FA6NER0 549 aaPredicted RBP13.16□□□□□ -0.3
SFXN3-201ENST00000224807 A8MXK9 166 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 TBC1D3LB9A6J9 549 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 F8W036 122 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 TGM6O95932 706 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 F13BP05160 661 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 TBC1D3HP0C7X1 549 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 ZNF28P17035 718 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 NDUFS1P28331 727 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 BLOC1S1P78537 153 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 DYRK1AQ13627 763 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 ALG10BQ5I7T1 473 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 TBC1D3GQ6DHY5 549 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 TBC1D3CQ6IPX1 549 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 ABHD17CQ6PCB6 329 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 CMIPQ8IY22 773 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 TBC1D3Q8IZP1 549 aaPredicted RBP13.16□□□□□ -0.3
SFXN3-201ENST00000224807 TSEN15Q8WW01 171 aaKnown RBP13.16□□□□□ -0.3
SFXN3-201ENST00000224807 GFI1Q99684 422 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 SLITRK2Q9H156 845 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 TAS2R5Q9NYW4 299 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 SIGLEC7Q9Y286 467 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 PRELID3BQ9Y3B1 194 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 PRUNE2Q8WUY3 3088 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 KIAA0100Q14667 2235 aaKnown RBP13.16□□□□□ -0.3
SFXN3-201ENST00000224807 TSPAN11A1L157 253 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 ELOA3DA6NLF2 546 aaPredicted RBP13.16□□□□□ -0.3
SFXN3-201ENST00000224807 OR2AT4A6NND4 320 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 KCNJ13O60928 360 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 VIPR2P41587 438 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 LTBQ06643 244 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 ELOA3BQ3SY89 546 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 DMRTC1Q5HYR2 192 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 ZNF626Q68DY1 528 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 ELOA3Q8NG57 546 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 OR5T3Q8NGG3 340 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 OR1S2Q8NGQ3 325 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 OR5K2Q8NHB8 316 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 ADAD1Q96M93 576 aaKnown RBP13.16□□□□□ -0.3
SFXN3-201ENST00000224807 POFUT1Q9H488 388 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 TMEM27Q9HBJ8 222 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 AKAP7Q9P0M2 348 aaPredicted RBP13.16□□□□□ -0.3
SFXN3-201ENST00000224807 NCDNQ9UBB6 729 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 KIF26AQ9ULI4 1882 aaPredicted RBP13.16□□□□□ -0.3
SFXN3-201ENST00000224807 KANTRA0A1W2PQU2 76 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 GALR3O60755 368 aaPredicted RBP13.15□□□□□ -0.3
SFXN3-201ENST00000224807 EFEMP2O95967 443 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 NFYBP25208 207 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 ZNF136P52737 540 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 TAS2R43P59537 309 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 SKP1P63208 163 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 REEP5Q00765 189 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 MPP7Q5T2T1 576 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 LRRC69Q6ZNQ3 347 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 PLPP7Q8NBV4 271 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 KREMEN2Q8NCW0 462 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 OR4N2Q8NGD1 307 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 LILRB1Q8NHL6 650 aaPredicted RBP13.15□□□□□ -0.3
SFXN3-201ENST00000224807 SDF2Q99470 211 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 PARP12Q9H0J9 701 aaKnown RBP13.15□□□□□ -0.3
SFXN3-201ENST00000224807 ATG5Q9H1Y0 275 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 EXOSC3Q9NQT5 275 aaKnown RBP13.15□□□□□ -0.3
SFXN3-201ENST00000224807 TRBV23-1A0A0A0MS06 115 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 A0A1W2PPV9 198 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 PRRT4C9JH25 899 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 AKR7A3O95154 331 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 IFNGP01579 166 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 FGF2P09038 288 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 DDX6P26196 483 aaKnown RBP eCLIP13.15□□□□□ -0.3
SFXN3-201ENST00000224807 MST1P26927 711 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 PRDX1Q06830 199 aaKnown RBP13.15□□□□□ -0.3
SFXN3-201ENST00000224807 SWI5Q1ZZU3 235 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 SLC48A1Q6P1K1 146 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 PRSS41Q7RTY9 318 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 PXKQ7Z7A4 578 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 MRGPREQ86SM8 312 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 LNX2Q8N448 690 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 OR2A1Q8NGT9 310 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 ELF4Q99607 663 aaPredicted RBP13.15□□□□□ -0.3
SFXN3-201ENST00000224807 MTHFD2LQ9H903 347 aaPredicted RBP13.15□□□□□ -0.3
SFXN3-201ENST00000224807 TRPV4Q9HBA0 871 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 MED17Q9NVC6 651 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 KCNE5Q9UJ90 142 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 FOXJ3Q9UPW0 622 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 FAM96BQ9Y3D0 163 aa13.15□□□□□ -0.3
SFXN3-201ENST00000224807 TRAV8-7A0A075B6U6 113 aa13.14□□□□□ -0.31
SFXN3-201ENST00000224807 FITM1A5D6W6 292 aa13.14□□□□□ -0.31
SFXN3-201ENST00000224807 SYT5O00445 386 aa13.14□□□□□ -0.31
SFXN3-201ENST00000224807 PRAF2O60831 178 aa13.14□□□□□ -0.31
SFXN3-201ENST00000224807 ADAM11O75078 769 aa13.14□□□□□ -0.31
SFXN3-201ENST00000224807 CXCL14O95715 111 aa13.14□□□□□ -0.31
SFXN3-201ENST00000224807 LDOC1O95751 146 aaPredicted RBP13.14□□□□□ -0.31
SFXN3-201ENST00000224807 AMY2AP04746 511 aa13.14□□□□□ -0.31
SFXN3-201ENST00000224807 ADRB3P13945 408 aa13.14□□□□□ -0.31
SFXN3-201ENST00000224807 DEFB103AP81534 67 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms