RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 NXPH1P58417 271 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 TP53I3Q53FA7 332 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 YIF1BQ5BJH7 314 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 RNASE12Q5GAN4 147 aaKnown RBP9.11□□□□□ -0.95
USP11-201ENST00000218348 DMRTC2Q8IXT2 367 aaPredicted RBP9.11□□□□□ -0.95
USP11-201ENST00000218348 OR4M2Q8NGB6 313 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 ZDHHC12Q96GR4 267 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 ALG8Q9BVK2 526 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 MS4A7Q9GZW8 240 aaPredicted RBP9.11□□□□□ -0.95
USP11-201ENST00000218348 CRLF2Q9HC73 371 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 KRCC1Q9NPI7 259 aaPredicted RBP9.11□□□□□ -0.95
USP11-201ENST00000218348 IGHV1OR21-1A0A087WYE8 117 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 SAGE2PA6NJ88 616 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 RIIAD1A6NNX1 92 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 KLF4O43474 513 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 CDC40O60508 579 aaKnown RBP eCLIP9.11□□□□□ -0.95
USP11-201ENST00000218348 LYPD3O95274 346 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 PYCR1P32322 319 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 PSMB10P40306 273 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 E2F1Q01094 437 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 ODF4Q2M2E3 257 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 NXNL2Q5VZ03 156 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 TMPRSS11AQ6ZMR5 421 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 SSX6Q7RTT6 188 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 KLHL36Q8N4N3 616 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 OR6C4Q8NGE1 309 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 OR52H1Q8NGJ2 320 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 ZNRF4Q8WWF5 429 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 FGF11Q92914 225 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 SLC25A36Q96CQ1 311 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 MNTQ99583 582 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 BCL7BQ9BQE9 202 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 SLC30A2Q9BRI3 323 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 A0A0B4J2E0 115 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 A0A1B0GX12 115 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 KDM4EB2RXH2 506 aaPredicted RBP9.11□□□□□ -0.95
USP11-201ENST00000218348 BHLHE40O14503 412 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 HCRTR2O43614 444 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 PLGP00747 810 aaPredicted RBP9.11□□□□□ -0.95
USP11-201ENST00000218348 OPN1LWP04000 364 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 NBL1P41271 181 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 TEKQ02763 1124 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 TOMM34Q15785 309 aaPredicted RBP9.11□□□□□ -0.95
USP11-201ENST00000218348 C3orf38Q5JPI3 329 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 MANEAQ5SRI9 462 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 C1QL3Q5VWW1 255 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 ZNF595Q8IYB9 648 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 ARHGEF39Q8N4T4 335 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 OR52N1Q8NH53 320 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 SVIPQ8NHG7 77 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 MOSPD2Q8NHP6 518 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 PTPMT1Q8WUK0 201 aaPredicted RBP9.11□□□□□ -0.95
USP11-201ENST00000218348 KCTD7Q96MP8 289 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 NDC1Q9BTX1 674 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 FGF21Q9NSA1 209 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 PEX16Q9Y5Y5 336 aa9.11□□□□□ -0.95
USP11-201ENST00000218348 SERINC4A6NH21 518 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 IDSB3KWA1 339 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 C11orf98E9PRG8 122 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 ZNF670-ZNF695F2Z2N8 137 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 RCBTB2O95199 551 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 GPANK1O95872 356 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 CFIP05156 583 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 RPS4Y1P22090 263 aaKnown RBP9.1□□□□□ -0.95
USP11-201ENST00000218348 AQP2P41181 271 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 ATP12AP54707 1039 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 S100A12P80511 92 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 ALKBH1Q13686 389 aaKnown RBP9.1□□□□□ -0.95
USP11-201ENST00000218348 BAK1Q16611 211 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 NIPAL3Q6P499 406 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 KRT74Q7RTS7 529 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 PRSS42Q7Z5A4 293 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 MARCH3Q86UD3 253 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 ACBD7Q8N6N7 88 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 NEIL3Q8TAT5 605 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 ST8SIA4Q92187 359 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 PIGKQ92643 395 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 C4orf36Q96KX1 117 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 TEAD3Q99594 435 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 GAL3ST1Q99999 423 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 SRA1Q9HD15 236 aaKnown RBP9.1□□□□□ -0.95
USP11-201ENST00000218348 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.1□□□□□ -0.95
USP11-201ENST00000218348 EP300Q09472 2414 aaPredicted RBP9.1□□□□□ -0.95
USP11-201ENST00000218348 ELOA3DA6NLF2 546 aaPredicted RBP9.1□□□□□ -0.95
USP11-201ENST00000218348 DRD5P21918 477 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 HTR1FP30939 366 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 MAP3K8P41279 467 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 SKP1P63208 163 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 ELOA3BQ3SY89 546 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 PYHIN1Q6K0P9 492 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 DBX2Q6ZNG2 339 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 MEPCEQ7L2J0 689 aaKnown RBP9.1□□□□□ -0.95
USP11-201ENST00000218348 C17orf82Q86X59 251 aaPredicted RBP9.1□□□□□ -0.95
USP11-201ENST00000218348 ELOA3Q8NG57 546 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 OR4M1Q8NGD0 313 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 NEDD4LQ96PU5 975 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 ARHGAP9Q9BRR9 750 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 KATNB1Q9BVA0 655 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 NUDT9Q9BW91 350 aa9.1□□□□□ -0.95
USP11-201ENST00000218348 WNT5BQ9H1J7 359 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms