RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 TMEM225Q6GV28 225 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 B3GNT6Q6ZMB0 384 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 MOSPD2Q8NHP6 518 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 C9orf16Q9BUW7 83 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 CALHM2Q9HA72 323 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 EI24O14681 340 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 SERPINI2O75830 405 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 FCGR2AP12318 317 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 GNLYP22749 145 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 PEX2P28328 305 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 RPS4XP62701 263 aaKnown RBP24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 RPL18Q07020 188 aaKnown RBP24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 PUDPQ08623 228 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 FHL1Q13642 323 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 ZBED5Q49AG3 693 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 ABLIM2Q6H8Q1 611 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 ADPRHL1Q8NDY3 354 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 FANK1Q8TC84 345 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 UCK2Q9BZX2 261 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 MCCC2Q9HCC0 563 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 TAS2R5Q9NYW4 299 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 SIGLEC7Q9Y286 467 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 HIF3AQ9Y2N7 669 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 CD8B2A6NJW9 211 aa24.31■■□□□ 1.48
CHMP4B-201ENST00000217402 SOCS2O14508 198 aa24.31■■□□□ 1.48
CHMP4B-201ENST00000217402 CYTIPO60759 359 aa24.31■■□□□ 1.48
CHMP4B-201ENST00000217402 HPRP00739 348 aa24.31■■□□□ 1.48
CHMP4B-201ENST00000217402 UQCRC1P31930 480 aa24.31■■□□□ 1.48
CHMP4B-201ENST00000217402 KLHL17Q6TDP4 642 aa24.31■■□□□ 1.48
CHMP4B-201ENST00000217402 ATCAYQ86WG3 371 aa24.31■■□□□ 1.48
CHMP4B-201ENST00000217402 C9orf106Q8NAJ2 232 aa24.31■■□□□ 1.48
CHMP4B-201ENST00000217402 WNT2BQ93097 391 aa24.31■■□□□ 1.48
CHMP4B-201ENST00000217402 IL20RAQ9UHF4 553 aa24.31■■□□□ 1.48
CHMP4B-201ENST00000217402 CLEC4AQ9UMR7 237 aa24.31■■□□□ 1.48
CHMP4B-201ENST00000217402 MS4A18H0YCH9 400 aa24.3■■□□□ 1.48
CHMP4B-201ENST00000217402 RNF13O43567 381 aa24.3■■□□□ 1.48
CHMP4B-201ENST00000217402 SOX14O95416 240 aa24.3■■□□□ 1.48
CHMP4B-201ENST00000217402 HOXD4P09016 255 aaPredicted RBP24.3■■□□□ 1.48
CHMP4B-201ENST00000217402 GSTM3P21266 225 aa24.3■■□□□ 1.48
CHMP4B-201ENST00000217402 CA7P43166 264 aa24.3■■□□□ 1.48
CHMP4B-201ENST00000217402 RASGEF1BQ0VAM2 473 aa24.3■■□□□ 1.48
CHMP4B-201ENST00000217402 MS4A18Q3C1V0 323 aa24.3■■□□□ 1.48
CHMP4B-201ENST00000217402 ZBTB49Q6ZSB9 765 aa24.3■■□□□ 1.48
CHMP4B-201ENST00000217402 SEM1Q6ZVN7 128 aa24.3■■□□□ 1.48
CHMP4B-201ENST00000217402 GALNT5Q7Z7M9 940 aa24.3■■□□□ 1.48
CHMP4B-201ENST00000217402 IGFN1Q86VF2 1251 aa24.3■■□□□ 1.48
CHMP4B-201ENST00000217402 EGLN3Q9H6Z9 239 aa24.3■■□□□ 1.48
CHMP4B-201ENST00000217402 RASD1Q9Y272 281 aa24.3■■□□□ 1.48
CHMP4B-201ENST00000217402 ZNF26P17031 533 aaPredicted RBP24.29■■□□□ 1.48
CHMP4B-201ENST00000217402 PPP2R2BQ00005 443 aa24.29■■□□□ 1.48
CHMP4B-201ENST00000217402 EIF2S3LQ2VIR3 472 aaKnown RBP24.29■■□□□ 1.48
CHMP4B-201ENST00000217402 ZNF620Q6ZNG0 422 aa24.29■■□□□ 1.48
CHMP4B-201ENST00000217402 KIF18BQ86Y91 864 aa24.29■■□□□ 1.48
CHMP4B-201ENST00000217402 MCEMP1Q8IX19 187 aa24.29■■□□□ 1.48
CHMP4B-201ENST00000217402 SLC43A2Q8N370 569 aa24.29■■□□□ 1.48
CHMP4B-201ENST00000217402 MAGEE2Q8TD90 523 aaPredicted RBP24.29■■□□□ 1.48
CHMP4B-201ENST00000217402 SLC29A1Q99808 456 aa24.29■■□□□ 1.48
CHMP4B-201ENST00000217402 RBM4BQ9BQ04 359 aaKnown RBP24.29■■□□□ 1.48
CHMP4B-201ENST00000217402 RBM4Q9BWF3 364 aaKnown RBP24.29■■□□□ 1.48
CHMP4B-201ENST00000217402 OSBPL10Q9BXB5 764 aa24.29■■□□□ 1.48
CHMP4B-201ENST00000217402 RNF122Q9H9V4 155 aa24.29■■□□□ 1.48
CHMP4B-201ENST00000217402 PAPOLBQ9NRJ5 636 aaKnown RBP24.29■■□□□ 1.48
CHMP4B-201ENST00000217402 KRT84Q9NSB2 600 aa24.29■■□□□ 1.48
CHMP4B-201ENST00000217402 B3GAT1Q9P2W7 334 aa24.29■■□□□ 1.48
CHMP4B-201ENST00000217402 MITFO75030 526 aaPredicted RBP24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 PTP4A3O75365 173 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 PLGP00747 810 aaPredicted RBP24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 F13BP05160 661 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 IGFBP1P08833 259 aaPredicted RBP24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 HLA-DOBP13765 273 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 IGFBP5P24593 272 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 FXYD6P3P58550 94 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 DAG1Q14118 895 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 ALG10Q5BKT4 473 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 NCCRP1Q6ZVX7 275 aaPredicted RBP24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 GCNT2Q8N0V5 402 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 PRR7Q8TB68 274 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 ZNF775Q96BV0 537 aaPredicted RBP24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 TTYH2Q9BSA4 534 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 OR52D1Q9H346 318 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 KLHL9Q9P2J3 617 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 A0A1W2PNV4 684 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 MBD3L4A6NDZ8 208 aaPredicted RBP24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 MBD3L3A6NE82 208 aaPredicted RBP24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 MBD3L5A6NJ08 208 aaPredicted RBP24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 ZNF716A6NP11 495 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 STSP08842 583 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 TSPAN19P0C672 248 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 POU3F1Q03052 451 aaPredicted RBP24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 SLC17A1Q14916 467 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 RNPS1Q15287 305 aaKnown RBP24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 FBXW10Q5XX13 1052 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 KDM4DQ6B0I6 523 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 SMARCD3Q6STE5 483 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 CD300LDQ6UXZ3 194 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 RASSF6Q6ZTQ3 369 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 OR9K2Q8NGE7 335 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 MBD3L2Q8NHZ7 208 aaPredicted RBP24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 TM9SF2Q99805 663 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 ENKD1Q9H0I2 346 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms