RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 AQP2P41181 271 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 WIPI1Q5MNZ9 446 aaPredicted RBP12.66□□□□□ -0.38
SIX4-201ENST00000216513 CD300LGQ6UXG3 332 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 CCL21O00585 134 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 COX6B1P14854 86 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 GABRB3P28472 473 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 PRRC1Q96M27 445 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 B3GNT2Q9NY97 397 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 PRR33A8MZF0 331 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 PIP5K1CO60331 668 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 TACR1P25103 407 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 PTAFRP25105 342 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 SPATS1Q496A3 300 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 PIGGQ5H8A4 983 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 ACER2Q5QJU3 275 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 ANKRD16Q6P6B7 361 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 TRIM46Q7Z4K8 759 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 ACBD7Q8N6N7 88 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 DEFB108BQ8NET1 73 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 OR13C2Q8NGS9 318 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 SUN5Q8TC36 379 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 CD320Q9NPF0 282 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 LRRC42Q9Y546 428 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 WDR90Q96KV7 1748 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 PRAMEF27A3QJZ7 478 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 FURINP09958 794 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 GGT1P19440 569 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 PVALBP20472 110 aaPredicted RBP12.66□□□□□ -0.38
SIX4-201ENST00000216513 Q8N402 240 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 CCM2LQ9NUG4 571 aaPredicted RBP12.66□□□□□ -0.38
SIX4-201ENST00000216513 MKS1Q9NXB0 559 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 TAF1LQ8IZX4 1826 aa12.66□□□□□ -0.38
SIX4-201ENST00000216513 MYO18AQ92614 2054 aaKnown RBP12.65□□□□□ -0.38
SIX4-201ENST00000216513 DISC1C4P0D8 188 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 NXPH3O95157 252 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 FAM157BP0CG42 384 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 CD22P20273 847 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 TSFMP43897 325 aaKnown RBP12.65□□□□□ -0.38
SIX4-201ENST00000216513 PITPNBP48739 271 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 TBPL2Q6SJ96 375 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 FJX1Q86VR8 437 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 SLC16A11Q8NCK7 471 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 ELP4Q96EB1 424 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 EGLN3Q9H6Z9 239 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 FAIMQ9NVQ4 179 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 ISXQ2M1V0 245 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 GGTA1PQ4G0N0 100 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 SLC22A7Q9Y694 548 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 ADAP00813 363 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 RAB3AP20336 220 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 TRHRP34981 398 aaPredicted RBP12.65□□□□□ -0.38
SIX4-201ENST00000216513 MAGEA6P43360 314 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 P2RY14Q15391 338 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 OR7E24Q6IFN5 339 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 COMTD1Q86VU5 262 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 TXNDC15Q96J42 360 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 TREX2Q9BQ50 279 aaPredicted RBP12.65□□□□□ -0.38
SIX4-201ENST00000216513 OR51E2Q9H255 320 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 UFSP2Q9NUQ7 469 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 RLIMQ9NVW2 624 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 QSER1Q2KHR3 1735 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 A0A1W2PR48 441 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 CENPBD1B2RD01 187 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 SNNO75324 88 aaPredicted RBP12.65□□□□□ -0.38
SIX4-201ENST00000216513 PPP1CAP62136 330 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 ARSKQ6UWY0 536 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 SLC35D2Q76EJ3 337 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 EXTL1Q92935 676 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 ST6GALNAC5Q9BVH7 336 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 KNG1P01042 644 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 FAM53BQ14153 422 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 C1orf140Q5VVS0 124 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 SPINK14Q6IE38 97 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 OR2T11Q8NH01 316 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 FCAMRQ8WWV6 532 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 MGLLQ99685 303 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 EMC6Q9BV81 110 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 CXorf36Q9H7Y0 433 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 PCDHGA1Q9Y5H4 931 aa12.65□□□□□ -0.38
SIX4-201ENST00000216513 A0A1W2PPH5 198 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 ALDOCP09972 364 aaKnown RBP12.64□□□□□ -0.39
SIX4-201ENST00000216513 GAB1Q13480 694 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 ZNF684Q5T5D7 378 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 BEST3Q8N1M1 668 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 LRRC3BQ96PB8 259 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 SARGQ9BW04 601 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 IGHV5-10-1A0A0J9YXX1 117 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 TMEM269A0A1B0GVZ9 245 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 MPIG6BO95866 241 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 STOMP27105 288 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 RBM34P42696 430 aaKnown RBP12.64□□□□□ -0.39
SIX4-201ENST00000216513 ADARB1P78563 741 aaKnown RBP12.64□□□□□ -0.39
SIX4-201ENST00000216513 MFSD12Q6NUT3 480 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 ZNF704Q6ZNC4 412 aaPredicted RBP12.64□□□□□ -0.39
SIX4-201ENST00000216513 DPY19L4Q7Z388 723 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 ZNF584Q8IVC4 421 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 ZC3H10Q96K80 434 aaKnown RBP12.64□□□□□ -0.39
SIX4-201ENST00000216513 APMAPQ9HDC9 416 aa12.64□□□□□ -0.39
SIX4-201ENST00000216513 PAQR5Q9NXK6 330 aaPredicted RBP12.64□□□□□ -0.39
SIX4-201ENST00000216513 TMEM181Q9P2C4 612 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms