RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	CD247	P20963	164 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	FAP	Q12884	760 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	ACKR1	Q16570	336 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	TIMM23B	Q5SRD1	257 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	FAM69A	Q5T7M9	428 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	ERICH5	Q6P6B1	374 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	SSX8	Q7RTT4	187 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	P2RY8	Q86VZ1	359 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	POU5F2	Q8N7G0	328 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	ZIC4	Q8N9L1	334 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	RP9	Q8TA86	221 aa	Known RBP	13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	RNF217	Q8TC41	542 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	SLC26A7	Q8TE54	656 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	RASSF5	Q8WWW0	418 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	TAAR8	Q969N4	342 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	TAMM41	Q96BW9	452 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	RCN3	Q96D15	328 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	MCHR1	Q99705	422 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	TAS2R16	Q9NYV7	291 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	UPB1	Q9UBR1	384 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	IGKV1D-42	A0A075B6H8	117 aa		13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	TRAV36DV7	A0A075B6V5	113 aa		13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	CIB4	A0PJX0	185 aa		13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	FZD7	O75084	574 aa		13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	RAD51D	O75771	328 aa		13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	CDH12	P55289	794 aa		13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	VEZF1	Q14119	521 aa		13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	PPA1	Q15181	289 aa		13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	NPTX1	Q15818	432 aa		13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	SWT1	Q5T5J6	900 aa	Known RBP	13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	TSPO2	Q5TGU0	170 aa		13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	ZNF613	Q6PF04	617 aa		13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	ZNF704	Q6ZNC4	412 aa	Predicted RBP	13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	C20orf204	Q6ZNR8	217 aa		13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	AAED1	Q7RTV5	226 aa		13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	SPATA21	Q7Z572	469 aa		13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	P3H2	Q8IVL5	708 aa		13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	OR6T1	Q8NGN1	323 aa		13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	MUCL1	Q96DR8	90 aa		13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	ZNF583	Q96ND8	569 aa		13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	ZNF385A	Q96PM9	386 aa	Known RBP	13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	EPYC	Q99645	322 aa		13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	TMEM204	Q9BSN7	226 aa		13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	ESRP2	Q9H6T0	727 aa	Known RBP	13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	SLC7A10	Q9NS82	523 aa		13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	BEX4	Q9NWD9	120 aa	Predicted RBP	13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	USF3	Q68DE3	2245 aa		13.25	□□□□□ -0.29
PHGDH-231	ENST00000641939	OR5H1	A6NKK0	313 aa		13.24	□□□□□ -0.29
PHGDH-231	ENST00000641939	PDLIM1	O00151	329 aa		13.24	□□□□□ -0.29
PHGDH-231	ENST00000641939	AIM2	O14862	343 aa		13.24	□□□□□ -0.29
PHGDH-231	ENST00000641939	PLAU	P00749	431 aa		13.24	□□□□□ -0.29
PHGDH-231	ENST00000641939	ITGA5	P08648	1049 aa		13.24	□□□□□ -0.29
PHGDH-231	ENST00000641939	COX4I1	P13073	169 aa		13.24	□□□□□ -0.29
PHGDH-231	ENST00000641939	CRYBA2	P53672	197 aa		13.24	□□□□□ -0.29
PHGDH-231	ENST00000641939	SEC24C	P53992	1094 aa		13.24	□□□□□ -0.29
PHGDH-231	ENST00000641939	MFSD13A	Q14CX5	517 aa		13.24	□□□□□ -0.29
PHGDH-231	ENST00000641939	ENTPD8	Q5MY95	495 aa		13.24	□□□□□ -0.29
PHGDH-231	ENST00000641939	NCMAP	Q5T1S8	102 aa		13.24	□□□□□ -0.29
PHGDH-231	ENST00000641939	SEZ6L2	Q6UXD5	910 aa		13.24	□□□□□ -0.29
PHGDH-231	ENST00000641939	CREB3L2	Q70SY1	520 aa		13.24	□□□□□ -0.29
PHGDH-231	ENST00000641939	POMGNT2	Q8NAT1	580 aa		13.24	□□□□□ -0.29
PHGDH-231	ENST00000641939	OR4D11	Q8NGI4	311 aa		13.24	□□□□□ -0.29
PHGDH-231	ENST00000641939	OR6S1	Q8NH40	331 aa		13.24	□□□□□ -0.29
PHGDH-231	ENST00000641939	VANGL1	Q8TAA9	524 aa	Predicted RBP	13.24	□□□□□ -0.29
PHGDH-231	ENST00000641939	PIGT	Q969N2	578 aa		13.24	□□□□□ -0.29
PHGDH-231	ENST00000641939	ELAC2	Q9BQ52	826 aa	Known RBP	13.24	□□□□□ -0.29
PHGDH-231	ENST00000641939	TMEM43	Q9BTV4	400 aa		13.24	□□□□□ -0.29
PHGDH-231	ENST00000641939	SLCO5A1	Q9H2Y9	848 aa		13.24	□□□□□ -0.29
PHGDH-231	ENST00000641939	USP22	Q9UPT9	525 aa		13.24	□□□□□ -0.29
PHGDH-231	ENST00000641939	B3GALT5	Q9Y2C3	310 aa		13.24	□□□□□ -0.29
PHGDH-231	ENST00000641939	CPSF4L	A6NMK7	179 aa	Known RBP	13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	FAM220BP	B1ANY3	271 aa		13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939		M0R082	166 aa		13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	CHP2	O43745	196 aa		13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	CD3E	P07766	207 aa		13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	GRPR	P30550	384 aa		13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	FOXG1	P55316	489 aa	Predicted RBP	13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	TGFBR3	Q03167	851 aa		13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	OR7E24	Q6IFN5	339 aa		13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	H1FNT	Q75WM6	255 aa	Predicted RBP	13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	ARPIN	Q7Z6K5	226 aa		13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	RBM45	Q8IUH3	476 aa	Known RBP	13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	EPHX4	Q8IUS5	362 aa		13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	KDM8	Q8N371	416 aa		13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	ZNF417	Q8TAU3	575 aa		13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	PROX1	Q92786	737 aa		13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	MUS81	Q96NY9	551 aa		13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	OXGR1	Q96P68	337 aa		13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	ZNF587	Q96SQ5	575 aa	Predicted RBP	13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	CCL19	Q99731	98 aa		13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	AMBRA1	Q9C0C7	1298 aa		13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	NSRP1	Q9H0G5	558 aa	Known RBP	13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	PCDHAC1	Q9H158	963 aa		13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	SEC14L4	Q9UDX3	406 aa		13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	BAG5	Q9UL15	447 aa		13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	AP3M1	Q9Y2T2	418 aa		13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	RNF115	Q9Y4L5	304 aa		13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	CORIN	Q9Y5Q5	1042 aa		13.23	□□□□□ -0.29
PHGDH-231	ENST00000641939	TRAPPC13	A5PLN9	417 aa		13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	OR6C65	A6NJZ3	312 aa		13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms