RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 ATG16L2Q8NAA4 619 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 AQP11Q8NBQ7 271 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 ATP6V1C2Q8NEY4 427 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 LILRB4Q8NHJ6 448 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 SLC25A43Q8WUT9 341 aaPredicted RBP8.44□□□□□ -1.06
PHGDH-228ENST00000641847 NRG4Q8WWG1 115 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 SMPDL3BQ92485 455 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 FAM46AQ96IP4 442 aaKnown RBP8.44□□□□□ -1.06
PHGDH-228ENST00000641847 PSD2Q9BQI7 771 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 TMEM43Q9BTV4 400 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 SLC19A3Q9BZV2 496 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 OR11A1Q9GZK7 315 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 TSPAN10Q9H1Z9 355 aaPredicted RBP8.44□□□□□ -1.06
PHGDH-228ENST00000641847 SLC6A15Q9H2J7 730 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 SERINC1Q9NRX5 453 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 QPCTLQ9NXS2 382 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 MED31Q9Y3C7 131 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 MRPS18CQ9Y3D5 142 aaKnown RBP8.44□□□□□ -1.06
PHGDH-228ENST00000641847 LIPGQ9Y5X9 500 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 TRAV36DV7A0A075B6V5 113 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 ZC3H12DA2A288 527 aaKnown RBP8.43□□□□□ -1.06
PHGDH-228ENST00000641847 FAM90A27PA6NNH2 459 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 A8MVM7 634 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 KIAA1324LA8MWY0 1029 aaPredicted RBP8.43□□□□□ -1.06
PHGDH-228ENST00000641847 ADAP00813 363 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 OPN1LWP04000 364 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 TFPIP10646 304 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 PRKACGP22612 351 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 CBLP22681 906 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 SHC1P29353 583 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 GCKP35557 465 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 OMPP47874 163 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 PTDSS1P48651 473 aaKnown RBP8.43□□□□□ -1.06
PHGDH-228ENST00000641847 CTBP2P56545 445 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 PPP2R2BQ00005 443 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 EGR4Q05215 589 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 PRKCDQ05655 676 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 DAG1Q14118 895 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 SYT14P1Q58G82 188 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 CMPK2Q5EBM0 449 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 C1orf140Q5VVS0 124 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 ANKRD34AQ69YU3 496 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 ZNF770Q6IQ21 691 aaPredicted RBP8.43□□□□□ -1.06
PHGDH-228ENST00000641847 FAHD1Q6P587 224 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 C3P1Q6ZMU1 363 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 ZBTB49Q6ZSB9 765 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 ZER1Q7Z7L7 766 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 PRIMA1Q86XR5 153 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 RNF113BQ8IZP6 322 aaKnown RBP8.43□□□□□ -1.06
PHGDH-228ENST00000641847 STK35Q8TDR2 534 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 RND1Q92730 232 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 GTPBP3Q969Y2 492 aaKnown RBP8.43□□□□□ -1.06
PHGDH-228ENST00000641847 DDIT4LQ96D03 193 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 BPIFA2Q96DR5 249 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 KTI12Q96EK9 354 aaPredicted RBP8.43□□□□□ -1.06
PHGDH-228ENST00000641847 SGTBQ96EQ0 304 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 DNAJA3Q96EY1 480 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 DMRTA2Q96SC8 542 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 FEVQ99581 238 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 NIPSNAP1Q9BPW8 284 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 RBM4BQ9BQ04 359 aaKnown RBP8.43□□□□□ -1.06
PHGDH-228ENST00000641847 RBM4Q9BWF3 364 aaKnown RBP8.43□□□□□ -1.06
PHGDH-228ENST00000641847 DGCR6LQ9BY27 220 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 KLHL4Q9C0H6 718 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 DEFB127Q9H1M4 99 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 CLEC4MQ9H2X3 399 aaPredicted RBP8.43□□□□□ -1.06
PHGDH-228ENST00000641847 VCX3BQ9H321 246 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 COQ10BQ9H8M1 238 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 ZDHHC11Q9H8X9 412 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 SMURF2Q9HAU4 748 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 MEPEQ9NQ76 525 aaPredicted RBP8.43□□□□□ -1.06
PHGDH-228ENST00000641847 C20orf141Q9NUB4 165 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 USE1Q9NZ43 259 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 MGAT4BQ9UQ53 548 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 TMEM5Q9Y2B1 443 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 SLC6A5Q9Y345 797 aa8.43□□□□□ -1.06
PHGDH-228ENST00000641847 TRGV5A0A0B4J1U4 118 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 GJE1A6NN92 205 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 EFCAB9A8MZ26 197 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 LRRN3E7EW58 273 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 LINC01387J3KSC0 135 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 EFNA2O43921 213 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 NPIPB7O75200 414 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 AHSA1O95433 338 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 HPRP00739 348 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 GASTP01350 101 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 MAKP20794 623 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 CHMP24386 653 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 IGFBP5P24593 272 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 FPR3P25089 353 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 SFTPDP35247 375 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 IDUAP35475 653 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 RPS5P46782 204 aaKnown RBP8.42□□□□□ -1.06
PHGDH-228ENST00000641847 DAPP51397 102 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 ALDH3A2P51648 485 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 MAP2K6P52564 334 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 GFRA1P56159 465 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 RAC1P63000 192 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 IL1RL1Q01638 556 aa8.42□□□□□ -1.06
PHGDH-228ENST00000641847 SLC10A1Q14973 349 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms