RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 PPP1R32Q7Z5V6 425 aa11.1□□□□□ -0.63
CACNA1D-228ENST00000638120 ADCK1Q86TW2 530 aa11.1□□□□□ -0.63
CACNA1D-228ENST00000638120 HIST1H2ACQ93077 130 aa11.1□□□□□ -0.63
CACNA1D-228ENST00000638120 Q96M85 177 aa11.1□□□□□ -0.63
CACNA1D-228ENST00000638120 NMNAT2Q9BZQ4 307 aa11.1□□□□□ -0.63
CACNA1D-228ENST00000638120 SLIRPQ9GZT3 109 aaKnown RBP11.1□□□□□ -0.63
CACNA1D-228ENST00000638120 RNF167Q9H6Y7 350 aa11.1□□□□□ -0.63
CACNA1D-228ENST00000638120 ZNF160Q9HCG1 818 aa11.1□□□□□ -0.63
CACNA1D-228ENST00000638120 SDHAF3Q9NRP4 125 aa11.1□□□□□ -0.63
CACNA1D-228ENST00000638120 WDR70Q9NW82 654 aa11.1□□□□□ -0.63
CACNA1D-228ENST00000638120 MED11Q9P086 117 aa11.1□□□□□ -0.63
CACNA1D-228ENST00000638120 STUB1Q9UNE7 303 aa11.1□□□□□ -0.63
CACNA1D-228ENST00000638120 CAB39Q9Y376 341 aaPredicted RBP11.1□□□□□ -0.63
CACNA1D-228ENST00000638120 PMF1-BGLAPU3KQ54 211 aa11.1□□□□□ -0.63
CACNA1D-228ENST00000638120 TP53I11O14683 189 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 APOBEC1P41238 236 aaKnown RBP11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 CASP3P42574 277 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 CRYBB2P43320 205 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 ENTPD1P49961 510 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 RPS18P62269 152 aaKnown RBP11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 GGTLC2Q14390 218 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 CSRP2Q16527 193 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 SGCBQ16585 318 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 EMC4Q5J8M3 183 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 LCN1P1Q5VSP4 162 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 TMEM81Q6P7N7 255 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 OPN5Q6U736 354 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 ZNF322Q6U7Q0 402 aaPredicted RBP11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 ARSKQ6UWY0 536 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 DHRS13Q6UX07 377 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 LSM14AQ8ND56 463 aaKnown RBP11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 UFD1Q92890 307 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 DACH2Q96NX9 599 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 NMNAT3Q96T66 252 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 NPAS1Q99742 590 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 ALG8Q9BVK2 526 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 CPNE5Q9HCH3 593 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 CCDC59Q9P031 241 aaKnown RBP11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 YARS2Q9Y2Z4 477 aaKnown RBP11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 CHCHD2Q9Y6H1 151 aaPredicted RBP11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 CACNA1HO95180 2353 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 DAPL1A0PJW8 107 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 OR6C68A6NDL8 312 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 AKAP8O43823 692 aaKnown RBP11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 AHSA1O95433 338 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 LALBAP00709 142 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 F13BP05160 661 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 MRPL3P09001 348 aaKnown RBP11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 SPI1P17947 270 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 ACTC1P68032 377 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 ACTA1P68133 377 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 LGALS3BPQ08380 585 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 FOXF1Q12946 379 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 DCTN2Q13561 401 aaKnown RBP11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 IL10RAQ13651 578 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 GALEQ14376 348 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 SLC25A53Q5H9E4 307 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 SLC35D3Q5M8T2 416 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 HES3Q5TGS1 186 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 TMPRSS11AQ6ZMR5 421 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 JAZF1Q86VZ6 243 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 ARMC10Q8N2F6 343 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 POMGNT2Q8NAT1 580 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 OR10H4Q8NGA5 316 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 OR5J2Q8NH18 312 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 OR6S1Q8NH40 331 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 ZPLD1Q8TCW7 415 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 SPRYD4Q8WW59 207 aaPredicted RBP11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 ASPNQ9BXN1 380 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 OR11A1Q9GZK7 315 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 FOXJ2Q9P0K8 574 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 VDAC3Q9Y277 283 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 FARSAQ9Y285 508 aaKnown RBP11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 SF3B6Q9Y3B4 125 aaKnown RBP11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 SDK2Q58EX2 2172 aa11.09□□□□□ -0.63
CACNA1D-228ENST00000638120 PRR33A8MZF0 331 aa11.08□□□□□ -0.64
CACNA1D-228ENST00000638120 OR2T1O43869 369 aa11.08□□□□□ -0.64
CACNA1D-228ENST00000638120 OTX2P32243 289 aa11.08□□□□□ -0.64
CACNA1D-228ENST00000638120 CDKN2AP42771 156 aaKnown RBP11.08□□□□□ -0.64
CACNA1D-228ENST00000638120 ZNF41P51814 821 aaPredicted RBP11.08□□□□□ -0.64
CACNA1D-228ENST00000638120 SLC25A1P53007 311 aa11.08□□□□□ -0.64
CACNA1D-228ENST00000638120 BDH1Q02338 343 aa11.08□□□□□ -0.64
CACNA1D-228ENST00000638120 SNTA1Q13424 505 aa11.08□□□□□ -0.64
CACNA1D-228ENST00000638120 KRR1Q13601 381 aaKnown RBP11.08□□□□□ -0.64
CACNA1D-228ENST00000638120 SSPNQ14714 243 aa11.08□□□□□ -0.64
CACNA1D-228ENST00000638120 PLPPR5Q32ZL2 321 aa11.08□□□□□ -0.64
CACNA1D-228ENST00000638120 TMEM164Q5U3C3 297 aa11.08□□□□□ -0.64
CACNA1D-228ENST00000638120 GPR139Q6DWJ6 353 aa11.08□□□□□ -0.64
CACNA1D-228ENST00000638120 LEG1Q6P5S2 330 aa11.08□□□□□ -0.64
CACNA1D-228ENST00000638120 OR2M3Q8NG83 312 aa11.08□□□□□ -0.64
CACNA1D-228ENST00000638120 ASB15Q8WXK1 588 aa11.08□□□□□ -0.64
CACNA1D-228ENST00000638120 SMPDL3BQ92485 455 aa11.08□□□□□ -0.64
CACNA1D-228ENST00000638120 SLC25A36Q96CQ1 311 aa11.08□□□□□ -0.64
CACNA1D-228ENST00000638120 ZMYND19Q96E35 227 aaPredicted RBP11.08□□□□□ -0.64
CACNA1D-228ENST00000638120 DNAJA3Q96EY1 480 aa11.08□□□□□ -0.64
CACNA1D-228ENST00000638120 TRMT61AQ96FX7 289 aaKnown RBP11.08□□□□□ -0.64
CACNA1D-228ENST00000638120 MRGPRX4Q96LA9 322 aa11.08□□□□□ -0.64
CACNA1D-228ENST00000638120 TSPAN32Q96QS1 320 aa11.08□□□□□ -0.64
CACNA1D-228ENST00000638120 TBX5Q99593 518 aa11.08□□□□□ -0.64
CACNA1D-228ENST00000638120 TIMP4Q99727 224 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms