RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 GLSO94925 669 aaPredicted RBP10.6□□□□□ -0.71
CLN6-223ENST00000637823 OR6A2O95222 327 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 PPP1R3DO95685 299 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 HPNP05981 417 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 CD14P08571 375 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 APEHP13798 732 aaKnown RBP10.6□□□□□ -0.71
CLN6-223ENST00000637823 GRPRP30550 384 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 AQP2P41181 271 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 MEOX1P50221 254 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 GABARAPL2P60520 117 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 FOXK2Q01167 660 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 PLGLB1Q02325 96 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 RPL18Q07020 188 aaKnown RBP10.6□□□□□ -0.71
CLN6-223ENST00000637823 ZP4Q12836 540 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 MYBPHQ13203 477 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 OR7A5Q15622 319 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 SMN1Q16637 294 aaKnown RBP10.6□□□□□ -0.71
CLN6-223ENST00000637823 TMEM176BQ3YBM2 270 aaPredicted RBP10.6□□□□□ -0.71
CLN6-223ENST00000637823 ALG10Q5BKT4 473 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 SLC6A19Q695T7 634 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 ARHGAP11AQ6P4F7 1023 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 TMEM154Q6P9G4 183 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 IGFL3Q6UXB1 125 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 LRRC69Q6ZNQ3 347 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 H1FNTQ75WM6 255 aaPredicted RBP10.6□□□□□ -0.71
CLN6-223ENST00000637823 YRDCQ86U90 279 aaKnown RBP10.6□□□□□ -0.71
CLN6-223ENST00000637823 ZADH2Q8N4Q0 377 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 LRRC75AQ8NAA5 344 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 ZFP62Q8NB50 900 aaPredicted RBP10.6□□□□□ -0.71
CLN6-223ENST00000637823 MOSPD2Q8NHP6 518 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 TM9SF4Q92544 642 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 ERMAPQ96PL5 475 aaPredicted RBP10.6□□□□□ -0.71
CLN6-223ENST00000637823 UBL7Q96S82 380 aaPredicted RBP10.6□□□□□ -0.71
CLN6-223ENST00000637823 TTTY12Q9BZ98 90 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 NRIP3Q9NQ35 241 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 CMC2Q9NRP2 79 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 TAS2R5Q9NYW4 299 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 KLHL21Q9UJP4 597 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 PCDHGA9Q9Y5G4 932 aaKnown RBP10.6□□□□□ -0.71
CLN6-223ENST00000637823 IER3IP1Q9Y5U9 82 aa10.6□□□□□ -0.71
CLN6-223ENST00000637823 FREM2Q5SZK8 3169 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 A0A087WXM4 84 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 TRAV17A0A0B4J275 112 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 SNTNA6NMZ2 147 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 RIIAD1A6NNX1 92 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 M0R082 166 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 M0R3G1 203 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 ENTPD6O75354 484 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 PMS2P2O95744 297 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 IFNGP01579 166 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 ADORA3P0DMS8 318 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 IMPDH2P12268 514 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 GTF2E2P29084 291 aaKnown RBP10.59□□□□□ -0.71
CLN6-223ENST00000637823 NOS3P29474 1203 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 UCNP55089 124 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 CTXN1P60606 82 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 PPIAP62937 165 aaKnown RBP10.59□□□□□ -0.71
CLN6-223ENST00000637823 SLC35A1P78382 337 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 BLMHQ13867 455 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 SLC35F1Q5T1Q4 408 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.59□□□□□ -0.71
CLN6-223ENST00000637823 ZNF417Q8TAU3 575 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 IPCEF1Q8WWN9 437 aaPredicted RBP10.59□□□□□ -0.71
CLN6-223ENST00000637823 OR5B2Q96R09 309 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 ZNF587Q96SQ5 575 aaPredicted RBP10.59□□□□□ -0.71
CLN6-223ENST00000637823 MRPS26Q9BYN8 205 aaKnown RBP10.59□□□□□ -0.71
CLN6-223ENST00000637823 FN3KQ9H479 309 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 DUSP21Q9H596 190 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 ZNF703Q9H7S9 590 aaPredicted RBP10.59□□□□□ -0.71
CLN6-223ENST00000637823 CHST11Q9NPF2 352 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 ALKBH4Q9NXW9 302 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 PSORS1C1Q9UIG5 152 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 PCDHGB7Q9Y5F8 929 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 DCHS1Q96JQ0 3298 aa10.59□□□□□ -0.71
CLN6-223ENST00000637823 TRIM64CA6NLI5 447 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 EIF4E1BA6NMX2 242 aaKnown RBP10.58□□□□□ -0.72
CLN6-223ENST00000637823 CLCA1A8K7I4 914 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 KDM4EB2RXH2 506 aaPredicted RBP10.58□□□□□ -0.72
CLN6-223ENST00000637823 PTGES3LE9PB15 166 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 MS4A18H0YCH9 400 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 K7ENP7 123 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 SULT2B1O00204 365 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 RNF13O43567 381 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 XPNPEP2O43895 674 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 MRPS14O60783 128 aaKnown RBP10.58□□□□□ -0.72
CLN6-223ENST00000637823 TXNDC12O95881 172 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 OPN1LWP04000 364 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 EEF1B2P24534 225 aaKnown RBP10.58□□□□□ -0.72
CLN6-223ENST00000637823 SHC1P29353 583 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 SFTPDP35247 375 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 MLLT10P55197 1068 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 OR2B6P58173 313 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 ERVK-25P63136 954 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 TUBA4AP68366 448 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 TLE3Q04726 772 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 ZNF239Q16600 458 aaKnown RBP10.58□□□□□ -0.72
CLN6-223ENST00000637823 MS4A18Q3C1V0 323 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 GXYLT1Q4G148 440 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 EMC4Q5J8M3 183 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 WIPI1Q5MNZ9 446 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms