RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	PLAUR	Q03405	335 aa		9.08	□□□□□ -0.96
UBE3A-223	ENST00000631247	EPS8	Q12929	822 aa		9.08	□□□□□ -0.96
UBE3A-223	ENST00000631247	LARS2	Q15031	903 aa	Known RBP	9.08	□□□□□ -0.96
UBE3A-223	ENST00000631247	GSTA3	Q16772	222 aa		9.08	□□□□□ -0.96
UBE3A-223	ENST00000631247	TMEM249	Q2WGJ8	235 aa		9.08	□□□□□ -0.96
UBE3A-223	ENST00000631247	C6orf52	Q5T4I8	152 aa		9.08	□□□□□ -0.96
UBE3A-223	ENST00000631247	AP1AR	Q63HQ0	302 aa		9.08	□□□□□ -0.96
UBE3A-223	ENST00000631247	TMEM225	Q6GV28	225 aa		9.08	□□□□□ -0.96
UBE3A-223	ENST00000631247	OR52P1P	Q8NH57	321 aa		9.08	□□□□□ -0.96
UBE3A-223	ENST00000631247	MGARP	Q8TDB4	240 aa		9.08	□□□□□ -0.96
UBE3A-223	ENST00000631247	TMEM45B	Q96B21	275 aa		9.08	□□□□□ -0.96
UBE3A-223	ENST00000631247	ZBTB9	Q96C00	473 aa		9.08	□□□□□ -0.96
UBE3A-223	ENST00000631247	ARMC7	Q9H6L4	198 aa		9.08	□□□□□ -0.96
UBE3A-223	ENST00000631247	WDR55	Q9H6Y2	383 aa	Predicted RBP	9.08	□□□□□ -0.96
UBE3A-223	ENST00000631247	RMND5A	Q9H871	391 aa		9.08	□□□□□ -0.96
UBE3A-223	ENST00000631247	MANSC1	Q9H8J5	431 aa		9.08	□□□□□ -0.96
UBE3A-223	ENST00000631247	RLIM	Q9NVW2	624 aa		9.08	□□□□□ -0.96
UBE3A-223	ENST00000631247	CDC42EP3	Q9UKI2	254 aa		9.08	□□□□□ -0.96
UBE3A-223	ENST00000631247	ANK2	Q01484	3957 aa		9.08	□□□□□ -0.96
UBE3A-223	ENST00000631247	HEATR1	Q9H583	2144 aa	Known RBP	9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	LIPT2	A6NK58	231 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	AQP7P3	A6NL99	342 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247		A8MVM7	634 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	ZNF587B	E7ETH6	402 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	ATP6V1G2-DDX39B	F2Z307	99 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	SLCO1B7	G3V0H7	640 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	PDLIM1	O00151	329 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	SLC22A3	O75751	556 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	AHSA1	O95433	338 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	GKN3P	P0CG01	181 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	ETFA	P13804	333 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	APOBEC3A	P31941	199 aa	Predicted RBP	9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	EFNA4	P52798	201 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	SLC25A3	Q00325	362 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	ZSWIM7	Q19AV6	140 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	HIKESHI	Q53FT3	197 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	C6orf10	Q5SRN2	563 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	C1QTNF12	Q5T7M4	302 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	RNF220	Q5VTB9	566 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	PRAMEF8	Q5VWM4	474 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	PRAMEF7	Q5VXH5	474 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	ATG16L1	Q676U5	607 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	WBP2NL	Q6ICG8	309 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	ZNF836	Q6ZNA1	936 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	VRK2	Q86Y07	508 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	TMEM99	Q8N816	258 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	WDR31	Q8NA23	367 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	FBXO17	Q96EF6	278 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	AURKB	Q96GD4	344 aa	Predicted RBP	9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	ITCH	Q96J02	903 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	TNFRSF13C	Q96RJ3	184 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	SF3B5	Q9BWJ5	86 aa	Known RBP	9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	AMBRA1	Q9C0C7	1298 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	OBP2B	Q9NPH6	170 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	THAP1	Q9NVV9	213 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	TMEM45A	Q9NWC5	275 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	MOK	Q9UQ07	419 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	ZNF443	Q9Y2A4	671 aa	Predicted RBP	9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	GPR45	Q9Y5Y3	372 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247	RTTN	Q86VV8	2226 aa		9.07	□□□□□ -0.96
UBE3A-223	ENST00000631247		A0A096LPI6	279 aa		9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	OR6C65	A6NJZ3	312 aa		9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	KLF11	O14901	512 aa		9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	GPRIN2	O60269	458 aa		9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	VAMP5	O95183	116 aa		9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	CRYAA	P02489	173 aa		9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	IL12A	P29459	219 aa		9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	LOXL1	Q08397	574 aa	Predicted RBP	9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	MPP2	Q14168	576 aa		9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	CARTPT	Q16568	116 aa		9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	PDCD4	Q53EL6	469 aa	Known RBP	9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	C1orf140	Q5VVS0	124 aa		9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	NIPAL3	Q6P499	406 aa		9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	SLC46A3	Q7Z3Q1	461 aa		9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	LSR	Q86X29	649 aa	Predicted RBP	9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	OR10H5	Q8NGA6	315 aa		9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	TMEM158	Q8WZ71	300 aa		9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	ZNF385A	Q96PM9	386 aa	Known RBP	9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	ALKBH3	Q96Q83	286 aa	Predicted RBP	9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	BEX2	Q9BXY8	128 aa		9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	PARD6B	Q9BYG5	372 aa		9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	THUMPD1	Q9NXG2	353 aa	Known RBP	9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	NKIRAS1	Q9NYS0	192 aa		9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	RPS6KB2	Q9UBS0	482 aa		9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	LPAR3	Q9UBY5	353 aa		9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	PRDM4	Q9UKN5	801 aa		9.06	□□□□□ -0.96
UBE3A-223	ENST00000631247	DSPP	Q9NZW4	1301 aa		9.05	□□□□□ -0.96
UBE3A-223	ENST00000631247		A0A0G2JPF8	293 aa		9.05	□□□□□ -0.96
UBE3A-223	ENST00000631247	LOC100996750	A0A140TA64	210 aa		9.05	□□□□□ -0.96
UBE3A-223	ENST00000631247	TMEM120B	A0PK00	339 aa		9.05	□□□□□ -0.96
UBE3A-223	ENST00000631247	ELOA3D	A6NLF2	546 aa	Predicted RBP	9.05	□□□□□ -0.96
UBE3A-223	ENST00000631247	HNRNPCL2	B2RXH8	293 aa		9.05	□□□□□ -0.96
UBE3A-223	ENST00000631247	HNRNPCL3	B7ZW38	293 aa		9.05	□□□□□ -0.96
UBE3A-223	ENST00000631247	C5orf58	C9J3I9	102 aa		9.05	□□□□□ -0.96
UBE3A-223	ENST00000631247	FRS3	O43559	492 aa		9.05	□□□□□ -0.96
UBE3A-223	ENST00000631247	HNRNPCL1	O60812	293 aa	Known RBP	9.05	□□□□□ -0.96
UBE3A-223	ENST00000631247	LGI1	O95970	557 aa		9.05	□□□□□ -0.96
UBE3A-223	ENST00000631247	IGHA1	P01876	353 aa		9.05	□□□□□ -0.96
UBE3A-223	ENST00000631247	TFPT	P0C1Z6	253 aa		9.05	□□□□□ -0.96
UBE3A-223	ENST00000631247	FAM157C	P0CG43	387 aa		9.05	□□□□□ -0.96

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