RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 FAM153BP0C7A2 387 aa17.38■□□□□ 0.37
TARDBP-228ENST00000629725 G6PDP11413 515 aa17.38■□□□□ 0.37
TARDBP-228ENST00000629725 CREB1P16220 341 aa17.38■□□□□ 0.37
TARDBP-228ENST00000629725 KRT4P19013 534 aa17.38■□□□□ 0.37
TARDBP-228ENST00000629725 NIPAL3Q6P499 406 aa17.38■□□□□ 0.37
TARDBP-228ENST00000629725 THSD4Q6ZMP0 1018 aa17.38■□□□□ 0.37
TARDBP-228ENST00000629725 CREB3L2Q70SY1 520 aa17.38■□□□□ 0.37
TARDBP-228ENST00000629725 CMIPQ8IY22 773 aa17.38■□□□□ 0.37
TARDBP-228ENST00000629725 CLDND2Q8NHS1 167 aa17.38■□□□□ 0.37
TARDBP-228ENST00000629725 LRRC37BQ96QE4 947 aa17.38■□□□□ 0.37
TARDBP-228ENST00000629725 NARFLQ9H6Q4 476 aa17.38■□□□□ 0.37
TARDBP-228ENST00000629725 USP22Q9UPT9 525 aa17.38■□□□□ 0.37
TARDBP-228ENST00000629725 IGHV2OR16-5A0A0B4J2B6 119 aa17.37■□□□□ 0.37
TARDBP-228ENST00000629725 FAAHO00519 579 aa17.37■□□□□ 0.37
TARDBP-228ENST00000629725 UPK3AO75631 287 aa17.37■□□□□ 0.37
TARDBP-228ENST00000629725 VAMP5O95183 116 aa17.37■□□□□ 0.37
TARDBP-228ENST00000629725 UQCRBP14927 111 aa17.37■□□□□ 0.37
TARDBP-228ENST00000629725 CBR1P16152 277 aa17.37■□□□□ 0.37
TARDBP-228ENST00000629725 CXCR1P25024 350 aa17.37■□□□□ 0.37
TARDBP-228ENST00000629725 SH3BGRP55822 239 aaPredicted RBP17.37■□□□□ 0.37
TARDBP-228ENST00000629725 CLDN8P56748 225 aa17.37■□□□□ 0.37
TARDBP-228ENST00000629725 POU3F1Q03052 451 aaPredicted RBP17.37■□□□□ 0.37
TARDBP-228ENST00000629725 JMJD8Q96S16 334 aa17.37■□□□□ 0.37
TARDBP-228ENST00000629725 TAPBPLQ9BX59 468 aa17.37■□□□□ 0.37
TARDBP-228ENST00000629725 ADPRHL2Q9NX46 363 aa17.37■□□□□ 0.37
TARDBP-228ENST00000629725 CFAP73A6NFT4 308 aa17.36■□□□□ 0.37
TARDBP-228ENST00000629725 SAGP10523 405 aaPredicted RBP17.36■□□□□ 0.37
TARDBP-228ENST00000629725 UQCRC2P22695 453 aa17.36■□□□□ 0.37
TARDBP-228ENST00000629725 GPR6P46095 362 aaPredicted RBP17.36■□□□□ 0.37
TARDBP-228ENST00000629725 LIMS1P48059 325 aa17.36■□□□□ 0.37
TARDBP-228ENST00000629725 P2RY4P51582 365 aa17.36■□□□□ 0.37
TARDBP-228ENST00000629725 ROR2Q01974 943 aaKnown RBP17.36■□□□□ 0.37
TARDBP-228ENST00000629725 NPRL3Q12980 569 aa17.36■□□□□ 0.37
TARDBP-228ENST00000629725 SNTB2Q13425 540 aaKnown RBP17.36■□□□□ 0.37
TARDBP-228ENST00000629725 DAG1Q14118 895 aa17.36■□□□□ 0.37
TARDBP-228ENST00000629725 ELFN2Q5R3F8 820 aa17.36■□□□□ 0.37
TARDBP-228ENST00000629725 KRT80Q6KB66 452 aa17.36■□□□□ 0.37
TARDBP-228ENST00000629725 FAHD2BQ6P2I3 314 aaPredicted RBP17.36■□□□□ 0.37
TARDBP-228ENST00000629725 ZCCHC23Q6ZST2 131 aa17.36■□□□□ 0.37
TARDBP-228ENST00000629725 C4orf33Q8N1A6 199 aa17.36■□□□□ 0.37
TARDBP-228ENST00000629725 OR51F2Q8NH61 342 aa17.36■□□□□ 0.37
TARDBP-228ENST00000629725 TUBGCP3Q96CW5 907 aa17.36■□□□□ 0.37
TARDBP-228ENST00000629725 FAHD2AQ96GK7 314 aa17.36■□□□□ 0.37
TARDBP-228ENST00000629725 RHOXF2Q9BQY4 288 aa17.36■□□□□ 0.37
TARDBP-228ENST00000629725 TXLNGYQ9BZA5 131 aa17.36■□□□□ 0.37
TARDBP-228ENST00000629725 LINC00470Q9BZP3 86 aa17.36■□□□□ 0.37
TARDBP-228ENST00000629725 CMAHPQ9Y471 501 aa17.36■□□□□ 0.37
TARDBP-228ENST00000629725 PRAMEF27A3QJZ7 478 aa17.35■□□□□ 0.37
TARDBP-228ENST00000629725 TFP02787 698 aa17.35■□□□□ 0.37
TARDBP-228ENST00000629725 EPHA1P21709 976 aa17.35■□□□□ 0.37
TARDBP-228ENST00000629725 ALDH3A1P30838 453 aa17.35■□□□□ 0.37
TARDBP-228ENST00000629725 ARR3P36575 388 aa17.35■□□□□ 0.37
TARDBP-228ENST00000629725 ARFIP2P53365 341 aa17.35■□□□□ 0.37
TARDBP-228ENST00000629725 EPS8Q12929 822 aa17.35■□□□□ 0.37
TARDBP-228ENST00000629725 MAD2L1Q13257 205 aaPredicted RBP17.35■□□□□ 0.37
TARDBP-228ENST00000629725 GSTA3Q16772 222 aa17.35■□□□□ 0.37
TARDBP-228ENST00000629725 SLC9B1Q4ZJI4 515 aa17.35■□□□□ 0.37
TARDBP-228ENST00000629725 PRR31Q5SQ13 230 aa17.35■□□□□ 0.37
TARDBP-228ENST00000629725 PRAMEF8Q5VWM4 474 aa17.35■□□□□ 0.37
TARDBP-228ENST00000629725 PRAMEF7Q5VXH5 474 aa17.35■□□□□ 0.37
TARDBP-228ENST00000629725 SAXO2Q658L1 398 aa17.35■□□□□ 0.37
TARDBP-228ENST00000629725 ANKRD46Q86W74 232 aa17.35■□□□□ 0.37
TARDBP-228ENST00000629725 CARM1Q86X55 608 aa17.35■□□□□ 0.37
TARDBP-228ENST00000629725 EPHX4Q8IUS5 362 aa17.35■□□□□ 0.37
TARDBP-228ENST00000629725 IL17RDQ8NFM7 739 aa17.35■□□□□ 0.37
TARDBP-228ENST00000629725 OR8J2Q8NGG1 315 aa17.35■□□□□ 0.37
TARDBP-228ENST00000629725 KIF18AQ8NI77 898 aa17.35■□□□□ 0.37
TARDBP-228ENST00000629725 NOX3Q9HBY0 568 aa17.35■□□□□ 0.37
TARDBP-228ENST00000629725 CRLF2Q9HC73 371 aa17.35■□□□□ 0.37
TARDBP-228ENST00000629725 AGAP5A6NIR3 686 aa17.34■□□□□ 0.37
TARDBP-228ENST00000629725 TMEM229AB2RXF0 380 aa17.34■□□□□ 0.37
TARDBP-228ENST00000629725 SYNGR3O43761 229 aa17.34■□□□□ 0.37
TARDBP-228ENST00000629725 CPSF4O95639 269 aaKnown RBP17.34■□□□□ 0.37
TARDBP-228ENST00000629725 PNPP00491 289 aa17.34■□□□□ 0.37
TARDBP-228ENST00000629725 GAAP10253 952 aa17.34■□□□□ 0.37
TARDBP-228ENST00000629725 IL7RP16871 459 aa17.34■□□□□ 0.37
TARDBP-228ENST00000629725 COL8A2P25067 703 aa17.34■□□□□ 0.37
TARDBP-228ENST00000629725 EVX1P49640 407 aa17.34■□□□□ 0.37
TARDBP-228ENST00000629725 GNA13Q14344 377 aa17.34■□□□□ 0.37
TARDBP-228ENST00000629725 AWAT1Q58HT5 328 aa17.34■□□□□ 0.37
TARDBP-228ENST00000629725 TEX29Q8N6K0 151 aa17.34■□□□□ 0.37
TARDBP-228ENST00000629725 ANKK1Q8NFD2 765 aa17.34■□□□□ 0.37
TARDBP-228ENST00000629725 NEURL3Q96EH8 262 aa17.34■□□□□ 0.37
TARDBP-228ENST00000629725 MECRQ9BV79 373 aa17.34■□□□□ 0.37
TARDBP-228ENST00000629725 RACGAP1Q9H0H5 632 aa17.34■□□□□ 0.37
TARDBP-228ENST00000629725 MS4A5Q9H3V2 200 aa17.34■□□□□ 0.37
TARDBP-228ENST00000629725 TREM2Q9NZC2 230 aa17.34■□□□□ 0.37
TARDBP-228ENST00000629725 NOP53Q9NZM5 478 aaKnown RBP17.34■□□□□ 0.37
TARDBP-228ENST00000629725 REV1Q9UBZ9 1251 aa17.34■□□□□ 0.37
TARDBP-228ENST00000629725 MARCOQ9UEW3 520 aaPredicted RBP17.34■□□□□ 0.37
TARDBP-228ENST00000629725 RASD1Q9Y272 281 aa17.34■□□□□ 0.37
TARDBP-228ENST00000629725 PRSS51A0A1B0GVH4 220 aa17.33■□□□□ 0.36
TARDBP-228ENST00000629725 SMIM23A6NLE4 172 aa17.33■□□□□ 0.36
TARDBP-228ENST00000629725 RPL36A-HNRNPH2H7BZ11 118 aa17.33■□□□□ 0.36
TARDBP-228ENST00000629725 M0R233 179 aa17.33■□□□□ 0.36
TARDBP-228ENST00000629725 HMGN4O00479 90 aa17.33■□□□□ 0.36
TARDBP-228ENST00000629725 SHBGP04278 402 aa17.33■□□□□ 0.36
TARDBP-228ENST00000629725 CHRM4P08173 479 aa17.33■□□□□ 0.36
TARDBP-228ENST00000629725 ACHEP22303 614 aa17.33■□□□□ 0.36
TARDBP-228ENST00000629725 CHI3L1P36222 383 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms