RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 ZNF823P16415 610 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 NT5EP21589 574 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 HTR2AP28223 471 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 SLAQ13239 276 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 INAQ16352 499 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 TP53I3Q53FA7 332 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 CTRB2Q6GPI1 263 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 FAM71F2Q6NXP2 309 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 BLOC1S2Q6QNY1 142 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 C6orf120Q7Z4R8 191 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 MOB3BQ86TA1 216 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 TMEM61Q8N0U2 210 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 RAET1EQ8TD07 263 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 ACER1Q8TDN7 264 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 CEP170P1Q96L14 293 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 ZNF416Q9BWM5 594 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 SCRT1Q9BWW7 348 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 TMEM117Q9H0C3 514 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 SUDS3Q9H7L9 328 aaPredicted RBP1.91□□□□□ -2.1
VBP1-204ENST00000625964 FOLH1BQ9HBA9 442 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 SLC17A5Q9NRA2 495 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 SIGLEC8Q9NYZ4 499 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 ACTR3BQ9P1U1 418 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 ZNF282Q9UDV7 671 aaPredicted RBP1.91□□□□□ -2.1
VBP1-204ENST00000625964 STAP1Q9ULZ2 295 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 TRAPPC4Q9Y296 219 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 DEPDC5O75140 1603 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 UGGT1Q9NYU2 1555 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 SCAF11Q99590 1463 aaKnown RBP1.91□□□□□ -2.1
VBP1-204ENST00000625964 NLRP1Q9C000 1473 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 RTEL1-TNFRSF6BF6WH68 1400 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 GPRASP1Q5JY77 1395 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 SF3B1O75533 1304 aaKnown RBP eCLIP1.91□□□□□ -2.1
VBP1-204ENST00000625964 A0A0G2JLM5 398 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 A0A0G2JN53 185 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 NPIPA7E9PJI5 369 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 CLDN3O15551 220 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 MBTPS2O43462 519 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 TPST2O60704 377 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 FOXH1O75593 365 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 UFL1O94874 794 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 STAMBPO95630 424 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 NPIPA8P0DM63 369 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 CALCRP30988 508 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 HOXA9P31269 272 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 FMO3P31513 532 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 PMELP40967 661 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 PTGDSP41222 190 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 DLX1P56177 255 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 KRTAP10-10P60014 251 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 CNTN2Q02246 1040 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 GGTA1PQ4G0N0 100 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 BCL7AQ4VC05 210 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 Q6ZN92 141 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 ZNF621Q6ZSS3 439 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 PRSS41Q7RTY9 318 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 TPRX1Q8N7U7 411 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 NPBQ8NG41 125 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 SLC22A8Q8TCC7 542 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 SPRYD4Q8WW59 207 aaPredicted RBP1.91□□□□□ -2.1
VBP1-204ENST00000625964 HTR3CQ8WXA8 447 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 STARD8Q92502 1023 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 FAM3CQ92520 227 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 TIMD4Q96H15 378 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 SEC22AQ96IW7 307 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 FCRL1Q96LA6 429 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 ZNF670Q9BS34 389 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 C20orf85Q9H1P6 137 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 CCL28Q9NRJ3 127 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 SLC25A37Q9NYZ2 338 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 GNPTGQ9UJJ9 305 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 NPIPA1Q9UND3 350 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 RASD1Q9Y272 281 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 RLFQ13129 1914 aa1.9□□□□□ -2.1
VBP1-204ENST00000625964 PHLPP1O60346 1717 aa1.9□□□□□ -2.1
VBP1-204ENST00000625964 SUPT6HQ7KZ85 1726 aaKnown RBP1.9□□□□□ -2.1
VBP1-204ENST00000625964 IQGAP1P46940 1657 aa1.9□□□□□ -2.1
VBP1-204ENST00000625964 ABCA6Q8N139 1617 aa1.9□□□□□ -2.1
VBP1-204ENST00000625964 ATP7AQ04656 1500 aa1.9□□□□□ -2.11
VBP1-204ENST00000625964 ATRNO75882 1429 aa1.9□□□□□ -2.11
VBP1-204ENST00000625964 SETD5Q9C0A6 1442 aa1.9□□□□□ -2.11
VBP1-204ENST00000625964 CEP350Q5VT06 3117 aa1.9□□□□□ -2.11
VBP1-204ENST00000625964 NINLQ9Y2I6 1382 aa1.9□□□□□ -2.11
VBP1-204ENST00000625964 PPIAL4DF5H284 164 aa1.9□□□□□ -2.11
VBP1-204ENST00000625964 MAPK13O15264 365 aa1.9□□□□□ -2.11
VBP1-204ENST00000625964 SPAG7O75391 227 aa1.9□□□□□ -2.11
VBP1-204ENST00000625964 RFC4P35249 363 aa1.9□□□□□ -2.11
VBP1-204ENST00000625964 GLP1RP43220 463 aa1.9□□□□□ -2.11
VBP1-204ENST00000625964 KIR2DS4P43632 304 aa1.9□□□□□ -2.11
VBP1-204ENST00000625964 TFPI2P48307 235 aa1.9□□□□□ -2.11
VBP1-204ENST00000625964 NMUP48645 174 aa1.9□□□□□ -2.11
VBP1-204ENST00000625964 PKNOX1P55347 436 aa1.9□□□□□ -2.11
VBP1-204ENST00000625964 ATP6AP1Q15904 470 aa1.9□□□□□ -2.11
VBP1-204ENST00000625964 SLC25A52Q3SY17 297 aa1.9□□□□□ -2.11
VBP1-204ENST00000625964 SAMD4BQ5PRF9 694 aaKnown RBP1.9□□□□□ -2.11
VBP1-204ENST00000625964 TPGS2Q68CL5 300 aa1.9□□□□□ -2.11
VBP1-204ENST00000625964 FAM71E1Q6IPT2 247 aa1.9□□□□□ -2.11
VBP1-204ENST00000625964 ABHD12BQ7Z5M8 362 aaPredicted RBP1.9□□□□□ -2.11
VBP1-204ENST00000625964 CAMK2N1Q7Z7J9 78 aa1.9□□□□□ -2.11
VBP1-204ENST00000625964 SLC26A11Q86WA9 606 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms