RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 NCDNQ9UBB6 729 aa12.96□□□□□ -0.34
LDB3-209ENST00000623056 LAMA3Q16787 3333 aa12.96□□□□□ -0.34
LDB3-209ENST00000623056 TBC1D3KA0A087X1G2 549 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 TBC1D3BA6NDS4 549 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 TBC1D3FA6NER0 549 aaPredicted RBP12.95□□□□□ -0.34
LDB3-209ENST00000623056 IDSB3KWA1 339 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 AGR2O95994 175 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 LRG1P02750 347 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 UBBP0CG47 229 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 UBCP0CG48 685 aaKnown RBP12.95□□□□□ -0.34
LDB3-209ENST00000623056 CALCBP10092 127 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 LAMP2P13473 410 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 FNTBP49356 437 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 MNX1P50219 401 aaPredicted RBP12.95□□□□□ -0.34
LDB3-209ENST00000623056 RPS27AP62979 156 aaKnown RBP12.95□□□□□ -0.34
LDB3-209ENST00000623056 UBA52P62987 128 aaKnown RBP12.95□□□□□ -0.34
LDB3-209ENST00000623056 DPTQ07507 201 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 MPPED2Q15777 294 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 NDUFAF6Q330K2 333 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 PCGF3Q3KNV8 242 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 METRNLQ641Q3 311 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 TBC1D3GQ6DHY5 549 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 ELP2Q6IA86 826 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 ARHGAP11AQ6P4F7 1023 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 DNM1P46Q6ZS02 220 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 TMEM17Q86X19 198 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 GLB1L2Q8IW92 636 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 PM20D2Q8IYS1 436 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 POMGNT2Q8NAT1 580 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 STK35Q8TDR2 534 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 RGP1Q92546 391 aaPredicted RBP12.95□□□□□ -0.34
LDB3-209ENST00000623056 COL26A1Q96A83 441 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 ZNF707Q96C28 371 aaPredicted RBP12.95□□□□□ -0.34
LDB3-209ENST00000623056 C12orf57Q99622 126 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 TMEM138Q9NPI0 162 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 PRSS16Q9NQE7 514 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 MOKQ9UQ07 419 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 KCNK7Q9Y2U2 307 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 NPIPA5A0A0B4J1W7 369 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 OR6C74A6NCV1 312 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 NPIPA7E9PJI5 369 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 H7C2Y5 167 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 CTNSO60931 367 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 H2AFB1P0C5Y9 115 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 NPIPA8P0DM63 369 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 ACHEP22303 614 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 FAUP35544 74 aaKnown RBP12.95□□□□□ -0.34
LDB3-209ENST00000623056 CCR2P41597 374 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 FGL2Q14314 439 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 GAS6Q14393 721 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 C11orf88Q6PI97 169 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 SLC39A5Q6ZMH5 540 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 SLC39A11Q8N1S5 342 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 OR4D10Q8NGI6 311 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 OR4K13Q8NH42 304 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 ARRDC3Q96B67 414 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 ACTR10Q9NZ32 417 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 ZMAT5Q9UDW3 170 aaKnown RBP12.95□□□□□ -0.34
LDB3-209ENST00000623056 NDRG3Q9UGV2 375 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 ZNF281Q9Y2X9 895 aa12.95□□□□□ -0.34
LDB3-209ENST00000623056 EIF4E2O60573 245 aaKnown RBP12.94□□□□□ -0.34
LDB3-209ENST00000623056 KCNJ13O60928 360 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 ZNF254O75437 659 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 GLSO94925 669 aaPredicted RBP12.94□□□□□ -0.34
LDB3-209ENST00000623056 SLC35G4P0C7Q5 338 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 HOXB1P14653 301 aaPredicted RBP12.94□□□□□ -0.34
LDB3-209ENST00000623056 MGMTP16455 207 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 ITPKBP27987 946 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 SLC6A6P31641 620 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 GGTLC2Q14390 218 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 OR2L13Q8N349 312 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 GRHL3Q8TE85 626 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 C15orf40Q8WUR7 153 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 TCEAL4Q96EI5 215 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 NARS2Q96I59 477 aaKnown RBP12.94□□□□□ -0.34
LDB3-209ENST00000623056 FERD3LQ96RJ6 166 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 MRI1Q9BV20 369 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 SYNPO2LQ9H987 977 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 KCNE5Q9UJ90 142 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 A0A087WV48 116 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 TRAV14DV4A0A0A6YYC5 116 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 RFPL4AA6NLU0 287 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 OR5K4A6NMS3 321 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 RFPL4AL1F8VTS6 287 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 PEX12O00623 359 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 TGM5O43548 720 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 TMEM127O75204 238 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 RBBP9O75884 186 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 HIST1H1CP16403 213 aaKnown RBP12.94□□□□□ -0.34
LDB3-209ENST00000623056 NANOS3P60323 173 aaKnown RBP12.94□□□□□ -0.34
LDB3-209ENST00000623056 NTHL1P78549 312 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 PLA2G7Q13093 441 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 FHL1Q13642 323 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 MOB3CQ70IA8 216 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 NRROSQ86YC3 692 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 ZNF619Q8N2I2 560 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 OR6N1Q8NGY5 312 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 OR14A16Q8NHC5 309 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 ZNRF4Q8WWF5 429 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 OTUB2Q96DC9 234 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms