RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 TAS2R41P59536 307 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 HTRA4P83105 476 aaPredicted RBP11.47□□□□□ -0.57
LITAF-221ENST00000622633 PRR5P85299 388 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 MLF2Q15773 248 aaPredicted RBP11.47□□□□□ -0.57
LITAF-221ENST00000622633 PLK5Q496M5 336 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 SPRED2Q7Z698 418 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 SPPL3Q8TCT6 385 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 SLC25A28Q96A46 364 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 ZNF764Q96H86 408 aaPredicted RBP11.47□□□□□ -0.57
LITAF-221ENST00000622633 TRMT61BQ9BVS5 477 aaKnown RBP11.47□□□□□ -0.57
LITAF-221ENST00000622633 FAIM2Q9BWQ8 316 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 TMPRSS13Q9BYE2 586 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 BCL2L10Q9HD36 194 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 ASCL3Q9NQ33 180 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 MBNL1Q9NR56 388 aaKnown RBP11.47□□□□□ -0.57
LITAF-221ENST00000622633 C5orf42Q9H799 3197 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 PRODHO43272 600 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 PCDH8O95206 1070 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 CH25HO95992 272 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 TFP02787 698 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 TRA2BP62995 288 aaKnown RBP11.47□□□□□ -0.57
LITAF-221ENST00000622633 GLO1Q04760 184 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 PRDX1Q06830 199 aaKnown RBP11.47□□□□□ -0.57
LITAF-221ENST00000622633 FOXO1Q12778 655 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 SLC9A5Q14940 896 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 PEA15Q15121 130 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 MINDY4Q4G0A6 757 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 C10orf91Q5T1B1 145 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 C1orf53Q5VUE5 145 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 FAM111BQ6SJ93 734 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 BAIAP2L2Q6UXY1 529 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 VRK2Q86Y07 508 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 OR52P1PQ8NH57 321 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 SUN3Q8TAQ9 357 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 SUSD6Q92537 303 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 S100PBPQ96BU1 408 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 CNRIP1Q96F85 164 aaPredicted RBP11.47□□□□□ -0.57
LITAF-221ENST00000622633 FGF20Q9NP95 211 aaPredicted RBP11.47□□□□□ -0.57
LITAF-221ENST00000622633 SF3B6Q9Y3B4 125 aaKnown RBP11.47□□□□□ -0.57
LITAF-221ENST00000622633 CHD7Q9P2D1 2997 aa11.47□□□□□ -0.57
LITAF-221ENST00000622633 TBC1D3BA6NDS4 549 aa11.46□□□□□ -0.57
LITAF-221ENST00000622633 CPSF4LA6NMK7 179 aaKnown RBP11.46□□□□□ -0.57
LITAF-221ENST00000622633 KDM4EB2RXH2 506 aaPredicted RBP11.46□□□□□ -0.57
LITAF-221ENST00000622633 ERI3O43414 337 aaKnown RBP11.46□□□□□ -0.57
LITAF-221ENST00000622633 CRHP06850 196 aa11.46□□□□□ -0.57
LITAF-221ENST00000622633 HIST1H1BP16401 226 aaKnown RBP11.46□□□□□ -0.57
LITAF-221ENST00000622633 GSTM3P21266 225 aa11.46□□□□□ -0.57
LITAF-221ENST00000622633 SOX18P35713 384 aa11.46□□□□□ -0.57
LITAF-221ENST00000622633 MTNR1AP48039 350 aa11.46□□□□□ -0.57
LITAF-221ENST00000622633 ANXA11P50995 505 aaKnown RBP11.46□□□□□ -0.57
LITAF-221ENST00000622633 ADPRHP54922 357 aa11.46□□□□□ -0.57
LITAF-221ENST00000622633 SIM1P81133 766 aaPredicted RBP11.46□□□□□ -0.57
LITAF-221ENST00000622633 FABP5Q01469 135 aa11.46□□□□□ -0.57
LITAF-221ENST00000622633 SLC35D3Q5M8T2 416 aa11.46□□□□□ -0.57
LITAF-221ENST00000622633 C18orf63Q68DL7 685 aa11.46□□□□□ -0.57
LITAF-221ENST00000622633 KIAA1161Q6NSJ0 714 aa11.46□□□□□ -0.57
LITAF-221ENST00000622633 SLC36A4Q6YBV0 504 aa11.46□□□□□ -0.57
LITAF-221ENST00000622633 LINC00471Q8N535 108 aa11.46□□□□□ -0.57
LITAF-221ENST00000622633 ZNF561Q8N587 486 aa11.46□□□□□ -0.57
LITAF-221ENST00000622633 C12orf76Q8N812 135 aaPredicted RBP11.46□□□□□ -0.57
LITAF-221ENST00000622633 OR2A1Q8NGT9 310 aa11.46□□□□□ -0.57
LITAF-221ENST00000622633 GNPDA2Q8TDQ7 276 aa11.46□□□□□ -0.57
LITAF-221ENST00000622633 WDR89Q96FK6 387 aaPredicted RBP11.46□□□□□ -0.57
LITAF-221ENST00000622633 FAM46AQ96IP4 442 aaKnown RBP11.46□□□□□ -0.57
LITAF-221ENST00000622633 ASB16Q96NS5 453 aa11.46□□□□□ -0.57
LITAF-221ENST00000622633 CAMK1GQ96NX5 476 aa11.46□□□□□ -0.57
LITAF-221ENST00000622633 ATG101Q9BSB4 218 aa11.46□□□□□ -0.57
LITAF-221ENST00000622633 CHRDQ9H2X0 955 aa11.46□□□□□ -0.57
LITAF-221ENST00000622633 SEMA4GQ9NTN9 838 aa11.46□□□□□ -0.57
LITAF-221ENST00000622633 DZANK1Q9NVP4 752 aa11.46□□□□□ -0.57
LITAF-221ENST00000622633 CXXC1Q9P0U4 656 aaPredicted RBP11.46□□□□□ -0.57
LITAF-221ENST00000622633 NTNG1Q9Y2I2 539 aa11.46□□□□□ -0.57
LITAF-221ENST00000622633 NUMA1Q14980 2115 aa11.46□□□□□ -0.57
LITAF-221ENST00000622633 A0A1B0GW55 424 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 STK25O00506 426 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 OR10H2O60403 315 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 GATBO75879 557 aaKnown RBP11.46□□□□□ -0.58
LITAF-221ENST00000622633 IFNA2P01563 188 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 DUX4L2P0CJ85 424 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 DUX4L3P0CJ86 424 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 DUX4L4P0CJ87 422 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 DUX4L5P0CJ88 424 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 DUX4L6P0CJ89 424 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 DUX4L7P0CJ90 424 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 LIMS3P0CW19 117 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 LIMS4P0CW20 117 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 OR8G3PP0DMU2 310 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 UGT2B7P16662 529 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 CEACAM6P40199 344 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 NHLH2Q02577 135 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 RAB40BQ12829 278 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 TPBGQ13641 420 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 ZNF311Q5JNZ3 666 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 PIP5KL1Q5T9C9 394 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 KIAA1211LQ6NV74 962 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 VITQ6UXI7 678 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 SPNS3Q6ZMD2 512 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 RABEPKQ7Z6M1 372 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 ACOT4Q8N9L9 421 aa11.46□□□□□ -0.58
LITAF-221ENST00000622633 TMEM185AQ8NFB2 350 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms