RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 OR51S1Q8NGJ8 323 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 OR4A4PQ8NGN8 299 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 HAVCR2Q8TDQ0 301 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 ASB13Q8WXK3 278 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 TCTN2Q96GX1 697 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 TEX101Q9BY14 249 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 NLE1Q9NVX2 485 aaPredicted RBP7.31□□□□□ -1.24
VPS11-209ENST00000622309 KLK11Q9UBX7 282 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 ZDHHC8Q9ULC8 765 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 FNDC1Q4ZHG4 1894 aaPredicted RBP7.31□□□□□ -1.24
VPS11-209ENST00000622309 RNASEK-C17orf49H0YIS7 233 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 BLOC1S5-TXNDC5H3BN57 136 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 GABARAPH6UMI1 98 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 SOX15O60248 233 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 MOSPD3O75425 235 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 ERAL1O75616 437 aaKnown RBP7.31□□□□□ -1.24
VPS11-209ENST00000622309 THBS1P07996 1170 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 FAUP35544 74 aaKnown RBP7.31□□□□□ -1.24
VPS11-209ENST00000622309 AHRP35869 848 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 PRKXP51817 358 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 ACSM1Q08AH1 577 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 AIMP2Q13155 320 aaKnown RBP7.31□□□□□ -1.24
VPS11-209ENST00000622309 ZNF385CQ66K41 422 aaPredicted RBP7.31□□□□□ -1.24
VPS11-209ENST00000622309 FAM169BQ8N8A8 192 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 INO80EQ8NBZ0 244 aaPredicted RBP7.31□□□□□ -1.24
VPS11-209ENST00000622309 ZNF485Q8NCK3 441 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 NUBPLQ8TB37 319 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 DNAJB3Q8WWF6 145 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 LINC01599Q8WXQ3 324 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 NECAB3Q96P71 396 aaPredicted RBP7.31□□□□□ -1.24
VPS11-209ENST00000622309 TAAR9Q96RI9 348 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 CCNL2Q96S94 520 aaPredicted RBP7.31□□□□□ -1.24
VPS11-209ENST00000622309 PTPN18Q99952 460 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 CHST8Q9H2A9 424 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 UBQLN3Q9H347 655 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 TMEM27Q9HBJ8 222 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 MYOZ1Q9NP98 299 aaPredicted RBP7.31□□□□□ -1.24
VPS11-209ENST00000622309 ASCL3Q9NQ33 180 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 LANCL2Q9NS86 450 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 DNAJB11Q9UBS4 358 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 ZNF282Q9UDV7 671 aaPredicted RBP7.31□□□□□ -1.24
VPS11-209ENST00000622309 IL19Q9UHD0 177 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 FBXW2Q9UKT8 454 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 ANGPT4Q9Y264 503 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 NPFFR2Q9Y5X5 522 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 A0A1W2PPE2 198 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 ZNF726A6NNF4 738 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 IQCF5A8MTL0 148 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 SEC14L6B5MCN3 397 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 ALG1L2C9J202 215 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 PHOX2AO14813 284 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 FGF10O15520 208 aaPredicted RBP7.31□□□□□ -1.24
VPS11-209ENST00000622309 TAPBPO15533 448 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 FGF1P05230 155 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 USP17L7P0C7H9 530 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 ZNF888P0CJ79 500 aaPredicted RBP7.31□□□□□ -1.24
VPS11-209ENST00000622309 OR8G3PP0DMU2 310 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 ELAVL4P26378 380 aaKnown RBP7.31□□□□□ -1.24
VPS11-209ENST00000622309 ID4P47928 161 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 SLC10A7Q0GE19 358 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 IL10RAQ13651 578 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 ZNF345Q14585 488 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 ZNHIT3Q15649 155 aaPredicted RBP7.31□□□□□ -1.24
VPS11-209ENST00000622309 MAPK14Q16539 360 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 CCL14Q16627 93 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 COX20Q5RI15 118 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 FDX2Q6P4F2 183 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 ZNF322Q6U7Q0 402 aaPredicted RBP7.31□□□□□ -1.24
VPS11-209ENST00000622309 ACOT7LQ6ZUV0 252 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 LRRC18Q8N456 261 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 OR4K2Q8NGD2 314 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 OR8J2Q8NGG1 315 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 PPTC7Q8NI37 304 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 ST7LQ8TDW4 575 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 MS4A4AQ96JQ5 239 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 SULT4A1Q9BR01 284 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 ORAI3Q9BRQ5 295 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 NDUFAF3Q9BU61 184 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 MIEF1Q9NQG6 463 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 SOHLH2Q9NX45 425 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 ELOVL2Q9NXB9 296 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 TRAV14DV4A0A0A6YYC5 116 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 PGPEP1LA6NFU8 196 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 OR5H14A6NHG9 310 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 FGF16O43320 207 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 AK1P00568 194 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 CRYABP02511 175 aaKnown RBP7.3□□□□□ -1.24
VPS11-209ENST00000622309 MMP3P08254 477 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 RPS10P46783 165 aaKnown RBP7.3□□□□□ -1.24
VPS11-209ENST00000622309 TTPAP49638 278 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 SMIM11AP58511 58 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 CLN3Q13286 438 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 DNLZQ5SXM8 178 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 ATPAF1Q5TC12 328 aaPredicted RBP7.3□□□□□ -1.24
VPS11-209ENST00000622309 TRIM40Q6P9F5 258 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 GPRIN1Q7Z2K8 1008 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 RANBP3LQ86VV4 465 aaPredicted RBP7.3□□□□□ -1.24
VPS11-209ENST00000622309 ACBD4Q8NC06 268 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 SDR9C7Q8NEX9 313 aa7.3□□□□□ -1.24
VPS11-209ENST00000622309 OR7G2Q8NG99 324 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms