RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 PPP1R14BQ96C90 147 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 RAB39BQ96DA2 213 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 ASB9Q96DX5 294 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 CERS2Q96G23 380 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 HPDLQ96IR7 371 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 ZNF514Q96K75 400 aaPredicted RBP3□□□□□ -1.93
BRCA1-229ENST00000621897 TGM7Q96PF1 710 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 ST6GALNAC5Q9BVH7 336 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 NLNQ9BYT8 704 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 PRRG3Q9BZD7 231 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 TSGA10Q9BZW7 698 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 CENPHQ9H3R5 247 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 GOLPH3Q9H4A6 298 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 NARFLQ9H6Q4 476 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 METTL8Q9H825 291 aaKnown RBP3□□□□□ -1.93
BRCA1-229ENST00000621897 ABCC13Q9NSE7 274 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 PSORS1C1Q9UIG5 152 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 MOKQ9UQ07 419 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 RNF115Q9Y4L5 304 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 CSDC2Q9Y534 153 aaKnown RBP3□□□□□ -1.93
BRCA1-229ENST00000621897 ATP10AO60312 1499 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 MROH7-TTC4A0A0A0MT08 1334 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 TTC21AQ8NDW8 1320 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 PPIAL4CA0A0B4J2A2 164 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 MGAT4DA6NG13 374 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 RNF212BA8MTL3 300 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 A8MXQ7 604 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 CENPBD1B2RD01 187 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 GOLGA8MH3BSY2 632 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 BTN3A3O00478 584 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 TNFSF11O14788 317 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 EIF3HO15372 352 aaKnown RBP eCLIP2.99□□□□□ -1.93
BRCA1-229ENST00000621897 RS1O15537 224 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 GPAA1O43292 621 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 NOL4O94818 638 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 ERLIN2O94905 339 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 RPP14O95059 124 aaKnown RBP2.99□□□□□ -1.93
BRCA1-229ENST00000621897 SERPIND1P05546 499 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 ALOX5P09917 674 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 HIST1H2AGP0C0S8 130 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-229ENST00000621897 UBTFL1P0CB47 393 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-229ENST00000621897 PPIAL4GP0DN37 164 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 HOXB8P17481 243 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-229ENST00000621897 ELK1P19419 428 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 MSNP26038 577 aaKnown RBP2.99□□□□□ -1.93
BRCA1-229ENST00000621897 IL12BP29460 328 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 GNA11P29992 359 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 PRKAR2BP31323 418 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 P2RY2P41231 377 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 CRYBB2P43320 205 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 SLC7A2P52569 658 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 SLC25A1P53007 311 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 EMP2P54851 167 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 RWDD2BP57060 319 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 ART3Q13508 389 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 EIF4EBP2Q13542 120 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-229ENST00000621897 SPHARQ15513 63 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 CAMK4Q16566 473 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 PPP1R3AQ16821 1122 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 CNPY1Q3B7I2 92 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 ZNF528Q3MIS6 628 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 SBK1Q52WX2 424 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 UNC50Q53HI1 259 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 TTMPQ5BVD1 217 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 LIPNQ5VXI9 398 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 MFSD14CQ5VZR4 134 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 OR2A2Q6IF42 318 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 CYP4V2Q6ZWL3 525 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-229ENST00000621897 ARCQ7LC44 396 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-229ENST00000621897 SELENOHQ8IZQ5 122 aaKnown RBP2.99□□□□□ -1.93
BRCA1-229ENST00000621897 ZNF444Q8N0Y2 327 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-229ENST00000621897 GVQW1Q8N7I0 195 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 OR51L1Q8NGJ5 315 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 OR4A15Q8NGL6 344 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 OR1L4Q8NGR5 311 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 CAPSLQ8WWF8 208 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 ING5Q8WYH8 240 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 HIST1H2ACQ93077 130 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 LHX4Q969G2 390 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 TMEM45BQ96B21 275 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 CCDC124Q96CT7 223 aaKnown RBP2.99□□□□□ -1.93
BRCA1-229ENST00000621897 ECHDC3Q96DC8 303 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 TECTBQ96PL2 329 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 SELENOSQ9BQE4 189 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 NDUFAF3Q9BU61 184 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 TEKT3Q9BXF9 490 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 PARD6BQ9BYG5 372 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 LRRC2Q9BYS8 371 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 DERL2Q9GZP9 239 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 OPN3Q9H1Y3 402 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-229ENST00000621897 NTN4Q9HB63 628 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 CCNB1IP1Q9NPC3 277 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 MYOZ2Q9NPC6 264 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 MS4A12Q9NXJ0 267 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 TAS2R16Q9NYV7 291 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 ADA2Q9NZK5 511 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 PITPNC1Q9UKF7 332 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 ABCG2Q9UNQ0 655 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 RBMX2Q9Y388 322 aaKnown RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms