RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 COL1A1P02452 1464 aaPredicted RBP6.71□□□□□ -1.34
COLCA1-205ENST00000620864 MYO18AQ92614 2054 aaKnown RBP6.71□□□□□ -1.34
COLCA1-205ENST00000620864 ANHXE9PGG2 379 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 ARAFP10398 606 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 POU3F3P20264 500 aaPredicted RBP6.7□□□□□ -1.34
COLCA1-205ENST00000620864 SFTPDP35247 375 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 CSKP41240 450 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 HTR4Q13639 388 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 GTDC1Q4AE62 458 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 SMUG1Q53HV7 270 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 DEFB126Q9BYW3 111 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 OR51I2Q9H344 312 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 NMNAT1Q9HAN9 279 aaPredicted RBP6.7□□□□□ -1.34
COLCA1-205ENST00000620864 MRPL22Q9NWU5 206 aaKnown RBP6.7□□□□□ -1.34
COLCA1-205ENST00000620864 PIAS3Q9Y6X2 628 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 TEX50A0A1B0GTY4 177 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 TCRBV3S1A0A5B6 114 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 CCL22O00626 93 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 FABP7O15540 132 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 GSRP00390 522 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 CTXN1P60606 82 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 TMEM97Q5BJF2 176 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 DCAF12L1Q5VU92 463 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 LCN10Q6JVE6 187 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 BTLAQ7Z6A9 289 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 CDS1Q92903 461 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 ESAMQ96AP7 390 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 OR1F2PQ96R84 312 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 ZNF300Q96RE9 604 aaPredicted RBP6.7□□□□□ -1.34
COLCA1-205ENST00000620864 PKMYT1Q99640 499 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 GOLT1BQ9Y3E0 138 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 DLG5Q8TDM6 1919 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 PRAMEF11O60813 436 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 NAGAP17050 411 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 ACKR3P25106 362 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 IL3RAP26951 378 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 PTGER4P35408 488 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 GPR4P46093 362 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 HIST1H3AP68431 136 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 RAB8BQ92930 207 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 ZNF689Q96CS4 500 aaPredicted RBP6.7□□□□□ -1.34
COLCA1-205ENST00000620864 BORCS6Q96GS4 357 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 NOL4LQ96MY1 436 aaPredicted RBP6.7□□□□□ -1.34
COLCA1-205ENST00000620864 METTL9Q9H1A3 318 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 RNF39Q9H2S5 420 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 NRIP3Q9NQ35 241 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 SIGLEC1Q9BZZ2 1709 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 ARNTLO00327 626 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 SOD2P04179 222 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 KCNE1P15382 129 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 TGM1P22735 817 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 DPP4P27487 766 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 ETV4P43268 484 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 RAC1P63000 192 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 EMX1Q04741 257 aaPredicted RBP6.7□□□□□ -1.34
COLCA1-205ENST00000620864 BAXQ07812 192 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 RNLSQ5VYX0 342 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 OR4C11Q6IEV9 310 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 SLC46A3Q7Z3Q1 461 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 FJX1Q86VR8 437 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 CATSPERDQ86XM0 798 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 UBALD2Q8IYN6 164 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 ZNF485Q8NCK3 441 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 ZFPM2Q8WW38 1151 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 TSLPQ969D9 159 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 SLC41A2Q96JW4 573 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 AKAP11Q9UKA4 1901 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 DUX1O43812 170 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 STATHP02808 62 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 CAPNS1P04632 268 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 H2AFB1P0C5Y9 115 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 ADRA2CP18825 462 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 CR2P20023 1033 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 CSN1S1P47710 185 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 SSBP1Q04837 148 aaKnown RBP6.7□□□□□ -1.34
COLCA1-205ENST00000620864 PCBP2Q15366 365 aaKnown RBP eCLIP6.7□□□□□ -1.34
COLCA1-205ENST00000620864 LYPD4Q6UWN0 246 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 CDRT4Q8N9R6 151 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 CDCA3Q99618 268 aaPredicted RBP6.7□□□□□ -1.34
COLCA1-205ENST00000620864 BCO1Q9HAY6 547 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 ZNF355PQ9NSJ1 428 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.7□□□□□ -1.34
COLCA1-205ENST00000620864 CDC123O75794 336 aaPredicted RBP6.7□□□□□ -1.34
COLCA1-205ENST00000620864 GALTP07902 379 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 OR5H8P0DN80 308 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 SOX3P41225 446 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 DIO3P55073 304 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 RPS18P62269 152 aaKnown RBP6.7□□□□□ -1.34
COLCA1-205ENST00000620864 AKR1C1Q04828 323 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 GRB7Q14451 532 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 EBPQ15125 230 aaKnown RBP6.7□□□□□ -1.34
COLCA1-205ENST00000620864 CATSPEREQ5SY80 951 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 ABHD17BQ5VST6 288 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 FAM180BQ6P0A1 224 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 ACOT7LQ6ZUV0 252 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 HHIPQ96QV1 700 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 CITED2Q99967 270 aaPredicted RBP6.7□□□□□ -1.34
COLCA1-205ENST00000620864 C20orf85Q9H1P6 137 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 TM7SF3Q9NS93 570 aa6.7□□□□□ -1.34
COLCA1-205ENST00000620864 RCE1Q9Y256 329 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms