RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 CPNE4Q96A23 557 aaPredicted RBP11.35□□□□□ -0.59
MATR3-227ENST00000618441 TMEM19Q96HH6 336 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 S100A13Q99584 98 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 NPTNQ9Y639 398 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 KIAA1217Q5T5P2 1943 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 OR5H14A6NHG9 310 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 IFNA17P01571 189 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 ATP1B1P05026 303 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 IRS1P35568 1242 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 PTGER3P43115 390 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 TPGS2Q68CL5 300 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 C12orf73Q69YU5 71 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 TMEM99Q8N816 258 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 TMEM40Q8WWA1 233 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 TRIM2Q9C040 744 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 SMG9Q9H0W8 520 aaKnown RBP11.35□□□□□ -0.59
MATR3-227ENST00000618441 RHOFQ9HBH0 211 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 SIRT7Q9NRC8 400 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 DNAJC25-GNG10A0A024R161 153 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 ZNF726A6NNF4 738 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 HMSDA8MTL9 139 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 GLP1RP43220 463 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 DUSP28Q4G0W2 176 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 C14orf28Q4W4Y0 310 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 TP53I3Q53FA7 332 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 ZC3H14Q6PJT7 736 aaKnown RBP11.35□□□□□ -0.59
MATR3-227ENST00000618441 BAIAP2L2Q6UXY1 529 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 NRROSQ86YC3 692 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 ZNF511Q8NB15 262 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 CYB561A3Q8NBI2 242 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 RGMAQ96B86 450 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 RRNAD1Q96FB5 475 aaKnown RBP11.35□□□□□ -0.59
MATR3-227ENST00000618441 GPA33Q99795 319 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 CAMK2AQ9UQM7 478 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 RNF215Q9Y6U7 377 aa11.35□□□□□ -0.59
MATR3-227ENST00000618441 A0A0U1RQK1 487 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 ZNF320A2RRD8 509 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 HCKP08631 526 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 TUBG1P23258 451 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 REEP3Q6NUK4 255 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 SPICQ8N5J4 248 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 SMIM4Q8WVI0 70 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 GHSRQ92847 366 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 KLK6Q92876 244 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 IP6K3Q96PC2 410 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 NKX3-1Q99801 234 aaPredicted RBP11.34□□□□□ -0.59
MATR3-227ENST00000618441 C16orf70Q9BSU1 422 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 TUBG2Q9NRH3 451 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 OR2M5A3KFT3 312 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 MPGP29372 298 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 CDNFQ49AH0 187 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 TMEM31Q5JXX7 168 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 C17orf47Q8NEP4 570 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 SYNPRQ8TBG9 265 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 S100A16Q96FQ6 103 aaKnown RBP11.34□□□□□ -0.59
MATR3-227ENST00000618441 C4orf36Q96KX1 117 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 NDC1Q9BTX1 674 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 SELENOIQ9C0D9 397 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 EIF5A2Q9GZV4 153 aaKnown RBP11.34□□□□□ -0.59
MATR3-227ENST00000618441 LRFN1Q9P244 771 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 METTL1Q9UBP6 276 aaKnown RBP11.34□□□□□ -0.59
MATR3-227ENST00000618441 TESQ9UGI8 421 aaKnown RBP11.34□□□□□ -0.59
MATR3-227ENST00000618441 ATG4BQ9Y4P1 393 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 A0A0D9SG52 128 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 A0A1W2PQH9 124 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 TMEM229AB2RXF0 380 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 RBBP9O75884 186 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 H2AFB1P0C5Y9 115 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 OR4Q2P0C623 313 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 ALPPL2P10696 532 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 AGTR1P30556 359 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 FAUP35544 74 aaKnown RBP11.34□□□□□ -0.59
MATR3-227ENST00000618441 OMPP47874 163 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 ZNF84P51523 738 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 OR12D2P58182 307 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 ZNF385BQ569K4 471 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 ZNF385CQ66K41 422 aaPredicted RBP11.34□□□□□ -0.59
MATR3-227ENST00000618441 FBXO42Q6P3S6 717 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 MOB3CQ70IA8 216 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 C2orf73Q8N5S3 287 aaPredicted RBP11.34□□□□□ -0.59
MATR3-227ENST00000618441 FAM71CQ8NEG0 241 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 NPRL2Q8WTW4 380 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 IGSF8Q969P0 613 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 SPG21Q9NZD8 308 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 ZDHHC8Q9ULC8 765 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 KCNIP3Q9Y2W7 256 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 KNL1Q8NG31 2342 aa11.34□□□□□ -0.59
MATR3-227ENST00000618441 GREB1LQ9C091 1923 aaPredicted RBP11.34□□□□□ -0.59
MATR3-227ENST00000618441 COL11A1P12107 1806 aaPredicted RBP11.34□□□□□ -0.59
MATR3-227ENST00000618441 DCTN6O00399 190 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 STAG3L3P0CL85 134 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 PSMB10P40306 273 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 RNF151Q2KHN1 245 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 MMP21Q8N119 569 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 ARIH2OSQ8N7S6 290 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 OR4D6Q8NGJ1 314 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 CCDC107Q8WV48 283 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 SECTM1Q8WVN6 248 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 NECAB3Q96P71 396 aaPredicted RBP11.33□□□□□ -0.6
MATR3-227ENST00000618441 WRAP53Q9BUR4 548 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms