RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 ANKRD19PQ9H560 264 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 NRIP3Q9NQ35 241 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 SLC23A2Q9UGH3 650 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 ATG2BQ96BY7 2078 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 TMEM212A6NML5 194 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 FAM227AF5H4B4 570 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 ZNF738Q8NE65 137 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 PSMF1Q92530 271 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 TANKQ92844 425 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 ADGRB3O60242 1522 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 TAL1P17542 331 aaPredicted RBP14.06□□□□□ -0.16
COL5A1-208ENST00000618395 DPP4P27487 766 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 ADPRMQ3LIE5 342 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 OR10C1Q96KK4 312 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 ZNF385DQ9H6B1 395 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 TLR9Q9NR96 1032 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 CNIH4Q9P003 139 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 LAMP3Q9UQV4 416 aa14.06□□□□□ -0.16
COL5A1-208ENST00000618395 HMGCLP35914 325 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 MBD3L1Q8WWY6 194 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 FGFBP2Q9BYJ0 223 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 EGLN3Q9H6Z9 239 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 CA14Q9ULX7 337 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 CD163L1Q9NR16 1453 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 A0A087WUU8 490 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 TSPAN6O43657 245 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 NDUFB2O95178 105 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 RPS26P62854 115 aaKnown RBP14.05□□□□□ -0.16
COL5A1-208ENST00000618395 UNC50Q53HI1 259 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 TMEM107Q6UX40 140 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 RBMXL3Q8N7X1 1067 aaKnown RBP14.05□□□□□ -0.16
COL5A1-208ENST00000618395 TP53RKQ96S44 253 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 KCNK12Q9HB15 430 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 TDP1Q9NUW8 608 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 MSRAQ9UJ68 235 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 TRBV23OR9-2A0A075B6M9 112 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 SLC35A2P78381 396 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 HENMT1Q5T8I9 393 aaKnown RBP14.05□□□□□ -0.16
COL5A1-208ENST00000618395 LGI3Q8N145 548 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 TFAP2BQ92481 460 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 L3HYPDHQ96EM0 354 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 C7orf72A4D263 438 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 LGALS2P05162 132 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 SNRPBP14678 240 aaKnown RBP14.05□□□□□ -0.16
COL5A1-208ENST00000618395 CTSOP43234 321 aaPredicted RBP14.05□□□□□ -0.16
COL5A1-208ENST00000618395 MRPS6P82932 125 aaKnown RBP14.05□□□□□ -0.16
COL5A1-208ENST00000618395 IL1F10Q8WWZ1 152 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 LDB2O43679 373 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 GALTP07902 379 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 SRMP19623 302 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 CRABP1P29762 137 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 GZMKP49863 264 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 RNF144AP50876 292 aaPredicted RBP14.05□□□□□ -0.16
COL5A1-208ENST00000618395 ADGRA1Q86SQ6 560 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 OR9A4Q8NGU2 314 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 OR14C36Q8NHC7 312 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 ZNF300Q96RE9 604 aaPredicted RBP14.05□□□□□ -0.16
COL5A1-208ENST00000618395 ZNF354AO60765 605 aaPredicted RBP14.05□□□□□ -0.16
COL5A1-208ENST00000618395 APEHP13798 732 aaKnown RBP14.05□□□□□ -0.16
COL5A1-208ENST00000618395 RPL7L1Q6DKI1 246 aaKnown RBP14.05□□□□□ -0.16
COL5A1-208ENST00000618395 PLPPR4Q7Z2D5 763 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 CPA6Q8N4T0 437 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 UBL7Q96S82 380 aaPredicted RBP14.05□□□□□ -0.16
COL5A1-208ENST00000618395 OR1A1Q9P1Q5 309 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 SYT5O00445 386 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 ACAA1P09110 424 aaPredicted RBP14.05□□□□□ -0.16
COL5A1-208ENST00000618395 PMCHP20382 165 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 CLDN20P56880 219 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 ZNF322Q6U7Q0 402 aaPredicted RBP14.05□□□□□ -0.16
COL5A1-208ENST00000618395 ESPNLQ6ZVH7 1005 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 TMEM239Q8WW34 195 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 GHRLQ9UBU3 117 aa14.05□□□□□ -0.16
COL5A1-208ENST00000618395 ZNFX1Q9P2E3 1918 aaKnown RBP14.04□□□□□ -0.16
COL5A1-208ENST00000618395 LPLP06858 475 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 SLC35E2BP0CK96 405 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 CD1DP15813 335 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 GBX1Q14549 363 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 PLEKHS1Q5SXH7 462 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 MEPCEQ7L2J0 689 aaKnown RBP14.04□□□□□ -0.16
COL5A1-208ENST00000618395 LRRC25Q8N386 305 aaPredicted RBP14.04□□□□□ -0.16
COL5A1-208ENST00000618395 C4orf32Q8N8J7 132 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 ALOXE3Q9BYJ1 711 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 STEAP1Q9UHE8 339 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 NFAT5O94916 1531 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 EPHX1P07099 455 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 Q6ZRG5 221 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 NKX3-1Q99801 234 aaPredicted RBP14.04□□□□□ -0.16
COL5A1-208ENST00000618395 HHLA2Q9UM44 414 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 LINC00116Q8NCU8 138 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 RHOFQ9HBH0 211 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 FGF4P08620 206 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 DUSP1P28562 367 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 HBA1P69905 142 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 CNN3Q15417 329 aaKnown RBP14.04□□□□□ -0.16
COL5A1-208ENST00000618395 LRRTM4Q86VH4 590 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 WDR5BQ86VZ2 330 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 OR5AP2Q8NGF4 316 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 PCED1BQ96HM7 432 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 AKAP11Q9UKA4 1901 aa14.04□□□□□ -0.16
COL5A1-208ENST00000618395 DOCK10Q96BY6 2186 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms