RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 TBC1D20Q96BZ9 403 aa17.53■□□□□ 0.4
SPAST-203ENST00000615843 SLC25A21Q9BQT8 299 aaPredicted RBP17.53■□□□□ 0.4
SPAST-203ENST00000615843 KATNB1Q9BVA0 655 aa17.53■□□□□ 0.4
SPAST-203ENST00000615843 SYT5O00445 386 aa17.52■□□□□ 0.4
SPAST-203ENST00000615843 F13BP05160 661 aa17.52■□□□□ 0.4
SPAST-203ENST00000615843 C1SP09871 688 aa17.52■□□□□ 0.4
SPAST-203ENST00000615843 MAKP20794 623 aa17.52■□□□□ 0.4
SPAST-203ENST00000615843 KCNIP4Q6PIL6 250 aa17.52■□□□□ 0.4
SPAST-203ENST00000615843 PRICKLE2Q7Z3G6 844 aa17.52■□□□□ 0.4
SPAST-203ENST00000615843 TMEM151BQ8IW70 566 aa17.52■□□□□ 0.4
SPAST-203ENST00000615843 C1orf123Q9NWV4 160 aa17.52■□□□□ 0.4
SPAST-203ENST00000615843 WBP2NLQ6ICG8 309 aa17.52■□□□□ 0.4
SPAST-203ENST00000615843 OR52E1Q8NGJ3 308 aa17.52■□□□□ 0.4
SPAST-203ENST00000615843 OR2A12Q8NGT7 310 aa17.52■□□□□ 0.4
SPAST-203ENST00000615843 HHATLQ9HCP6 504 aa17.52■□□□□ 0.4
SPAST-203ENST00000615843 GPR137BO60478 399 aa17.52■□□□□ 0.39
SPAST-203ENST00000615843 TGM1P22735 817 aa17.52■□□□□ 0.39
SPAST-203ENST00000615843 ACSM1Q08AH1 577 aa17.52■□□□□ 0.39
SPAST-203ENST00000615843 PAQR6Q6TCH4 344 aa17.52■□□□□ 0.39
SPAST-203ENST00000615843 PRR22Q8IZ63 422 aa17.52■□□□□ 0.39
SPAST-203ENST00000615843 RBM24Q9BX46 236 aaKnown RBP17.52■□□□□ 0.39
SPAST-203ENST00000615843 OR52A5Q9H2C5 316 aa17.52■□□□□ 0.39
SPAST-203ENST00000615843 DNAJC5Q9H3Z4 198 aa17.52■□□□□ 0.39
SPAST-203ENST00000615843 SLC25A37Q9NYZ2 338 aa17.52■□□□□ 0.39
SPAST-203ENST00000615843 ZNF629Q9UEG4 869 aaPredicted RBP17.52■□□□□ 0.39
SPAST-203ENST00000615843 PURGQ9UJV8 347 aaKnown RBP17.52■□□□□ 0.39
SPAST-203ENST00000615843 H3BML4 177 aa17.52■□□□□ 0.39
SPAST-203ENST00000615843 FXYD1O00168 92 aa17.52■□□□□ 0.39
SPAST-203ENST00000615843 ADAM10O14672 748 aa17.52■□□□□ 0.39
SPAST-203ENST00000615843 MT-CO2P00403 227 aa17.52■□□□□ 0.39
SPAST-203ENST00000615843 RAB33AQ14088 237 aa17.52■□□□□ 0.39
SPAST-203ENST00000615843 TMEM255BQ8WV15 326 aa17.52■□□□□ 0.39
SPAST-203ENST00000615843 YIPF5Q969M3 257 aa17.52■□□□□ 0.39
SPAST-203ENST00000615843 A6NLC8 198 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 B4GALT3O60512 393 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 ZDHHC11BP0C7U3 371 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 F3P13726 295 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 SERPINA2P20848 420 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 C5AR1P21730 350 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 CLLU1OSQ5K130 101 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 FAM69BQ5VUD6 431 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 SIGIRRQ6IA17 410 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 BTLAQ7Z6A9 289 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 SLC6A20Q9NP91 592 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 STEAP1Q9UHE8 339 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 MOKQ9UQ07 419 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 FBXO7Q9Y3I1 522 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 SGK494L7N484 410 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 TIMP2P16035 220 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 SRMP19623 302 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 OLIG1Q8TAK6 271 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 SLC41A2Q96JW4 573 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 SLCO5A1Q9H2Y9 848 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 TNFRSF12AQ9NP84 129 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 C17orf105B2RV13 164 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 GABARAPH6UMI1 98 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 MFGE8Q08431 387 aaPredicted RBP17.51■□□□□ 0.39
SPAST-203ENST00000615843 ADAM5Q6NVV9 412 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 TMEM179BQ7Z7N9 219 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 CCDC71Q8IV32 467 aaPredicted RBP17.51■□□□□ 0.39
SPAST-203ENST00000615843 ANGPTL6Q8NI99 470 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 UBQLN3Q9H347 655 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 ZBTB42B2RXF5 422 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 NUDT21O43809 227 aaKnown RBP17.51■□□□□ 0.39
SPAST-203ENST00000615843 DGCR2P98153 550 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 EXOSC6Q5RKV6 272 aaKnown RBP17.51■□□□□ 0.39
SPAST-203ENST00000615843 LIX1LQ8IVB5 337 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 TCTE3Q8IZS6 198 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 FAM26EQ8N5C1 309 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 SYT17Q9BSW7 474 aa17.51■□□□□ 0.39
SPAST-203ENST00000615843 CCDC163A0A0D9SF12 145 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 MYADML2A6NDP7 307 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 ZNF865P0CJ78 1059 aaPredicted RBP17.5■□□□□ 0.39
SPAST-203ENST00000615843 SPI1P17947 270 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 AANATQ16613 207 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 ZNF542PQ5EBM4 170 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 GDF7Q7Z4P5 450 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 IL17RCQ8NAC3 791 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 OR51D1Q8NGF3 324 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 OPALINQ96PE5 141 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 NXF5Q9H1B4 397 aaKnown RBP17.5■□□□□ 0.39
SPAST-203ENST00000615843 ANKRD19PQ9H560 264 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 MN1Q10571 1320 aaPredicted RBP17.5■□□□□ 0.39
SPAST-203ENST00000615843 RGPD1P0DJD0 1748 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 KDM4EB2RXH2 506 aaPredicted RBP17.5■□□□□ 0.39
SPAST-203ENST00000615843 HOXC13P31276 330 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 AKR1C1Q04828 323 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 KIAA0141Q14154 515 aaPredicted RBP17.5■□□□□ 0.39
SPAST-203ENST00000615843 LPCAT3Q6P1A2 487 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 DIO2Q92813 273 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 SRRQ9GZT4 340 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 RBM38Q9H0Z9 239 aaKnown RBP17.5■□□□□ 0.39
SPAST-203ENST00000615843 LDAHQ9H6V9 325 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 WIF1Q9Y5W5 379 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 COL14A1Q05707 1796 aaKnown RBP17.5■□□□□ 0.39
SPAST-203ENST00000615843 OR7A5Q15622 319 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 FBXW12Q6X9E4 464 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 DEFB119Q8N690 84 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 PLPP5Q8NEB5 264 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 OR51S1Q8NGJ8 323 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms