RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 A0A1W2PR64 198 aa9.57□□□□□ -0.88
TNFAIP3-208ENST00000615468 A0A1W2PRV1 198 aa9.57□□□□□ -0.88
TNFAIP3-208ENST00000615468 A6NLC8 198 aa9.57□□□□□ -0.88
TNFAIP3-208ENST00000615468 UBE2CO00762 179 aa9.57□□□□□ -0.88
TNFAIP3-208ENST00000615468 FGBP02675 491 aa9.57□□□□□ -0.88
TNFAIP3-208ENST00000615468 ASGR2P07307 311 aa9.57□□□□□ -0.88
TNFAIP3-208ENST00000615468 CLUP10909 449 aa9.57□□□□□ -0.88
TNFAIP3-208ENST00000615468 DAOP14920 347 aa9.57□□□□□ -0.88
TNFAIP3-208ENST00000615468 BTF3P20290 206 aaKnown RBP9.57□□□□□ -0.88
TNFAIP3-208ENST00000615468 PNLIPRP2P54317 469 aa9.57□□□□□ -0.88
TNFAIP3-208ENST00000615468 DEFB103AP81534 67 aa9.57□□□□□ -0.88
TNFAIP3-208ENST00000615468 FNDC3BQ53EP0 1204 aaKnown RBP9.57□□□□□ -0.88
TNFAIP3-208ENST00000615468 KCTD9Q7L273 389 aa9.57□□□□□ -0.88
TNFAIP3-208ENST00000615468 CASTOR1Q8WTX7 329 aa9.57□□□□□ -0.88
TNFAIP3-208ENST00000615468 CCDC107Q8WV48 283 aa9.57□□□□□ -0.88
TNFAIP3-208ENST00000615468 RAB3CQ96E17 227 aa9.57□□□□□ -0.88
TNFAIP3-208ENST00000615468 PRO1933Q9H354 126 aa9.57□□□□□ -0.88
TNFAIP3-208ENST00000615468 MARCH5Q9NX47 278 aa9.57□□□□□ -0.88
TNFAIP3-208ENST00000615468 DMRT1Q9Y5R6 373 aa9.57□□□□□ -0.88
TNFAIP3-208ENST00000615468 DOCK4Q8N1I0 1966 aa9.57□□□□□ -0.88
TNFAIP3-208ENST00000615468 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 GLOD5A6NK44 160 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 IMPA2O14732 288 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 ATP1B2P14415 290 aaPredicted RBP9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 EPCAMP16422 314 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 F2RL1P55085 397 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 OR10K2Q6IF99 312 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 GLB1L2Q8IW92 636 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 LILRA3Q8N6C8 439 aaPredicted RBP9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 MAFIPQ8WZ33 124 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 OR5P2Q8WZ92 322 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 CAMK1GQ96NX5 476 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 TCF7L1Q9HCS4 588 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 MYNNQ9NPC7 610 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 TREM2Q9NZC2 230 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 FBXO4Q9UKT5 387 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 FARSAQ9Y285 508 aaKnown RBP9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 C5orf51A6NDU8 294 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 CTDSPLO15194 276 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 OR2F2O95006 317 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 RPLP2P05387 115 aaKnown RBP9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 CKMP06732 381 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 TDGQ13569 410 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 OR2F1Q13607 317 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 COL9A2Q14055 689 aaPredicted RBP9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 JMJD6Q6NYC1 403 aaPredicted RBP9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 FAM83HQ6ZRV2 1179 aaPredicted RBP9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 GTF3AQ92664 365 aaKnown RBP9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 MCHR1Q99705 422 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 ZNF649Q9BS31 505 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 CPEB1Q9BZB8 566 aaKnown RBP9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 POFUT1Q9H488 388 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 SPG21Q9NZD8 308 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 NPIPB15A6NHN6 443 aaPredicted RBP9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 SLC38A8A6NNN8 435 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 COLCA2A8K830 154 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 H7C1Q1 480 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 TERTO14746 1132 aaKnown RBP9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 TBL1XO60907 577 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 YIF1AO95070 293 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 ADH6P28332 368 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 LAP3P28838 519 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 CD34P28906 385 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 CORO1AP31146 461 aaKnown RBP9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 CD80P33681 288 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 TAS2R20P59543 309 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 B4GALNT1Q00973 533 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 SLC9A5Q14940 896 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 NIPAL3Q6P499 406 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 ENPP7Q6UWV6 458 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 FRRS1Q6ZNA5 592 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 TMPRSS12Q86WS5 348 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 KCNRGQ8N5I3 272 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 OR51A7Q8NH64 312 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 TMEM255BQ8WV15 326 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 PPP1R1CQ8WVI7 109 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 SCAMP4Q969E2 229 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 ZMYND19Q96E35 227 aaPredicted RBP9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 ZNF350Q9GZX5 532 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 CCDC86Q9H6F5 360 aaKnown RBP9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 DMRT3Q9NQL9 472 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 AHSPQ9NZD4 102 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 SCN10AQ9Y5Y9 1956 aa9.56□□□□□ -0.88
TNFAIP3-208ENST00000615468 TMEM272A0A1B0GTI8 110 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 CXorf65A6NEN9 183 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 RIIAD1A6NNX1 92 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 RPP14O95059 124 aaKnown RBP9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 SRMP19623 302 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 ACTR1AP61163 376 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 PDZD11Q5EBL8 140 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 ACOT7LQ6ZUV0 252 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 VRK2Q86Y07 508 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 ETFBKMTQ8IXQ9 262 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 ARL14Q8N4G2 192 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 OR5T3Q8NGG3 340 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 RNF141Q8WVD5 230 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 MICU1Q9BPX6 476 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 SUCNR1Q9BXA5 334 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 SEC11CQ9BY50 192 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 OR52D1Q9H346 318 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms