RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 SHC2P98077 582 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 AMZ1Q400G9 498 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 TCTE1Q5JU00 501 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 LIPHQ8WWY8 451 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 KISS1RQ969F8 398 aaPredicted RBP9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 TCTN2Q96GX1 697 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 CD180Q99467 661 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 PELOQ9BRX2 385 aaKnown RBP9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 MARVELD1Q9BSK0 173 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 GPR174Q9BXC1 333 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 TRIM2Q9C040 744 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 CLDND1Q9NY35 253 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 OR10H1Q9Y4A9 318 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 PCDHGA9Q9Y5G4 932 aaKnown RBP9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 CLDN16Q9Y5I7 305 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 URB1O60287 2271 aaKnown RBP9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 LOC100509620A0A075B734 347 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 SLC9B1P1A6NJY1 282 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 SHOXO15266 292 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 TMEM127O75204 238 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 KHDRBS3O75525 346 aaKnown RBP9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 RD3LP0DJH9 198 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 PYCR1P32322 319 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 ACAA2P42765 397 aaKnown RBP9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 FUT7Q11130 342 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 POU4F2Q12837 409 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 GGTLC2Q14390 218 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 VASNQ6EMK4 673 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 ZNF322Q6U7Q0 402 aaPredicted RBP9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 WDR88Q6ZMY6 472 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 NR2C2APQ86WQ0 139 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 OR8K3Q8NH51 312 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 VSTM2LQ96N03 204 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 SLC25A18Q9H1K4 315 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 PPA2Q9H2U2 334 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 RANBP3Q9H6Z4 567 aaPredicted RBP9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 TNFRSF10DQ9UBN6 386 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 ICAM5Q9UMF0 924 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 RCE1Q9Y256 329 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 HRH3Q9Y5N1 445 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 SCN3AQ9NY46 2000 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 E9PI62 339 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 NSA2O95478 260 aaKnown RBP9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 IFNA16P05015 189 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 LIPCP11150 499 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 NPR2P20594 1047 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 EMDP50402 254 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 PSG6Q00889 435 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 PUDPQ08623 228 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 OPCMLQ14982 345 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 CLVS2Q5SYC1 327 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 HES5Q5TA89 166 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 Q6ZTK2 550 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 RTTNQ86VV8 2226 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 COX18Q8N8Q8 333 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 C19orf47Q8N9M1 422 aaKnown RBP9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 ACOT12Q8WYK0 555 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 ADAT1Q9BUB4 502 aaKnown RBP9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 GSX2Q9BZM3 304 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 SLC19A3Q9BZV2 496 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 OR52D1Q9H346 318 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 FOLH1BQ9HBA9 442 aa9.96□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 SLC22A31A6NKX4 558 aa9.96□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 EFCAB7A8K855 629 aa9.96□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 ZNF749O43361 778 aa9.96□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 GLAP06280 429 aa9.96□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 CT62P0C5K7 136 aa9.96□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 CTRB1P17538 263 aa9.96□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 ANXA7P20073 488 aaKnown RBP9.96□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 CTRB2Q6GPI1 263 aa9.96□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 OR5M10Q6IEU7 315 aa9.96□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 CXXC5Q7LFL8 322 aaKnown RBP9.96□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 PARGQ86W56 976 aa9.96□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 FAM71CQ8NEG0 241 aa9.96□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 OR2T4Q8NH00 348 aa9.96□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 ZC3HAV1LQ96H79 300 aaKnown RBP9.96□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 ERMAPQ96PL5 475 aaPredicted RBP9.96□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.96□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 SIRT4Q9Y6E7 314 aaPredicted RBP9.96□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 DAPL1A0PJW8 107 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 TRIM77I1YAP6 450 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 GPR171O14626 319 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 PDCD5O14737 125 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 ZNF217O75362 1048 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 SC5DO75845 299 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 PRG2P13727 222 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 CBR1P16152 277 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 MAKP20794 623 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 MTNR1BP49286 362 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 OTPQ5XKR4 325 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 ZNF550Q7Z398 422 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 ZCCHC10Q8TBK6 192 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 G6PC3Q9BUM1 346 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 HINT3Q9NQE9 182 aaKnown RBP9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 DIABLOQ9NR28 239 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 DNAJB12Q9NXW2 375 aaKnown RBP9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 EPHA6Q9UF33 1036 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 CYB5R1Q9UHQ9 305 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 ELF5Q9UKW6 265 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms