RNA–Protein interactions for RNA: ENST00000614056.4

PDCD2-215, Transcript of programmed cell death 2, humanhuman

TSL 2 BASIC

Gene PDCD2, Length 1,287 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-215ENST00000614056 NIPAL3Q6P499 406 aa23.96■■□□□ 1.43
PDCD2-215ENST00000614056 CREB3L2Q70SY1 520 aa23.96■■□□□ 1.43
PDCD2-215ENST00000614056 TUBA1AQ71U36 451 aa23.96■■□□□ 1.43
PDCD2-215ENST00000614056 ARIH2OSQ8N7S6 290 aa23.96■■□□□ 1.43
PDCD2-215ENST00000614056 GLB1L3Q8NCI6 653 aaPredicted RBP23.96■■□□□ 1.43
PDCD2-215ENST00000614056 SLC38A2Q96QD8 506 aa23.96■■□□□ 1.43
PDCD2-215ENST00000614056 PARD6BQ9BYG5 372 aa23.96■■□□□ 1.43
PDCD2-215ENST00000614056 CALML5Q9NZT1 146 aa23.96■■□□□ 1.43
PDCD2-215ENST00000614056 FKBP7Q9Y680 259 aa23.96■■□□□ 1.43
PDCD2-215ENST00000614056 NR5A2O00482 541 aa23.95■■□□□ 1.42
PDCD2-215ENST00000614056 UBE2NP61088 152 aaKnown RBP23.95■■□□□ 1.42
PDCD2-215ENST00000614056 SNRPD2P62316 118 aaKnown RBP23.95■■□□□ 1.42
PDCD2-215ENST00000614056 LARS2Q15031 903 aaKnown RBP23.95■■□□□ 1.42
PDCD2-215ENST00000614056 TNFAIP8L3Q5GJ75 292 aa23.95■■□□□ 1.42
PDCD2-215ENST00000614056 C1QTNF12Q5T7M4 302 aa23.95■■□□□ 1.42
PDCD2-215ENST00000614056 VHLLQ6RSH7 139 aa23.95■■□□□ 1.42
PDCD2-215ENST00000614056 LINGO2Q7L985 606 aa23.95■■□□□ 1.42
PDCD2-215ENST00000614056 SERPINA11Q86U17 422 aa23.95■■□□□ 1.42
PDCD2-215ENST00000614056 ANKS4BQ8N8V4 417 aa23.95■■□□□ 1.42
PDCD2-215ENST00000614056 MGARPQ8TDB4 240 aa23.95■■□□□ 1.42
PDCD2-215ENST00000614056 SLC38A5Q8WUX1 472 aa23.95■■□□□ 1.42
PDCD2-215ENST00000614056 C3orf49Q96BT1 292 aa23.95■■□□□ 1.42
PDCD2-215ENST00000614056 VRK1Q99986 396 aaPredicted RBP23.95■■□□□ 1.42
PDCD2-215ENST00000614056 SHARPINQ9H0F6 387 aa23.95■■□□□ 1.42
PDCD2-215ENST00000614056 PIF1Q9H611 641 aa23.95■■□□□ 1.42
PDCD2-215ENST00000614056 A0A096LPE4 126 aa23.94■■□□□ 1.42
PDCD2-215ENST00000614056 A0A1W2PPZ6 126 aa23.94■■□□□ 1.42
PDCD2-215ENST00000614056 SLC22A3O75751 556 aa23.94■■□□□ 1.42
PDCD2-215ENST00000614056 IL6P05231 212 aa23.94■■□□□ 1.42
PDCD2-215ENST00000614056 TFPTP0C1Z6 253 aa23.94■■□□□ 1.42
PDCD2-215ENST00000614056 PDCD4Q53EL6 469 aaKnown RBP23.94■■□□□ 1.42
PDCD2-215ENST00000614056 ATG16L1Q676U5 607 aa23.94■■□□□ 1.42
PDCD2-215ENST00000614056 SLC46A3Q7Z3Q1 461 aa23.94■■□□□ 1.42
PDCD2-215ENST00000614056 SLC25A36Q96CQ1 311 aa23.94■■□□□ 1.42
PDCD2-215ENST00000614056 TMEM19Q96HH6 336 aa23.94■■□□□ 1.42
PDCD2-215ENST00000614056 PIMREGQ9BSJ6 248 aa23.94■■□□□ 1.42
PDCD2-215ENST00000614056 CHODLQ9H9P2 273 aa23.94■■□□□ 1.42
PDCD2-215ENST00000614056 TPT1P8Q9HAU6 139 aa23.94■■□□□ 1.42
PDCD2-215ENST00000614056 CACYBPQ9HB71 228 aaKnown RBP23.94■■□□□ 1.42
PDCD2-215ENST00000614056 OBP2BQ9NPH6 170 aa23.94■■□□□ 1.42
PDCD2-215ENST00000614056 TMEM160Q9NX00 188 aa23.94■■□□□ 1.42
PDCD2-215ENST00000614056 MALRD1Q5VYJ5 2156 aa23.93■■□□□ 1.42
PDCD2-215ENST00000614056 LMX1BO60663 402 aa23.93■■□□□ 1.42
PDCD2-215ENST00000614056 UPK3AO75631 287 aa23.93■■□□□ 1.42
PDCD2-215ENST00000614056 IDO1P14902 403 aa23.93■■□□□ 1.42
PDCD2-215ENST00000614056 WDR4P57081 412 aaKnown RBP23.93■■□□□ 1.42
PDCD2-215ENST00000614056 RNF220Q5VTB9 566 aa23.93■■□□□ 1.42
PDCD2-215ENST00000614056 IL17RELQ6ZVW7 336 aa23.93■■□□□ 1.42
PDCD2-215ENST00000614056 EPHX4Q8IUS5 362 aa23.93■■□□□ 1.42
PDCD2-215ENST00000614056 KDM8Q8N371 416 aa23.93■■□□□ 1.42
PDCD2-215ENST00000614056 BCL2L2Q92843 193 aaPredicted RBP23.93■■□□□ 1.42
PDCD2-215ENST00000614056 CA10Q9NS85 328 aa23.93■■□□□ 1.42
PDCD2-215ENST00000614056 THAP1Q9NVV9 213 aa23.93■■□□□ 1.42
PDCD2-215ENST00000614056 LPAR3Q9UBY5 353 aa23.93■■□□□ 1.42
PDCD2-215ENST00000614056 ZNF232Q9UNY5 417 aa23.93■■□□□ 1.42
PDCD2-215ENST00000614056 CHST2Q9Y4C5 530 aa23.93■■□□□ 1.42
PDCD2-215ENST00000614056 VAMP5O95183 116 aa23.92■■□□□ 1.42
PDCD2-215ENST00000614056 AHSA1O95433 338 aa23.92■■□□□ 1.42
PDCD2-215ENST00000614056 CRYAAP02489 173 aa23.92■■□□□ 1.42
PDCD2-215ENST00000614056 SERPINF1P36955 418 aa23.92■■□□□ 1.42
PDCD2-215ENST00000614056 GZMKP49863 264 aa23.92■■□□□ 1.42
PDCD2-215ENST00000614056 HOXC5Q00444 222 aa23.92■■□□□ 1.42
PDCD2-215ENST00000614056 SLC9B1Q4ZJI4 515 aa23.92■■□□□ 1.42
PDCD2-215ENST00000614056 BOD1Q96IK1 185 aa23.92■■□□□ 1.42
PDCD2-215ENST00000614056 SPATA9Q9BWV2 254 aa23.92■■□□□ 1.42
PDCD2-215ENST00000614056 SEC61A2Q9H9S3 476 aa23.92■■□□□ 1.42
PDCD2-215ENST00000614056 RASD1Q9Y272 281 aa23.92■■□□□ 1.42
PDCD2-215ENST00000614056 VWC2LB2RUY7 222 aa23.91■■□□□ 1.42
PDCD2-215ENST00000614056 TMEM229AB2RXF0 380 aa23.91■■□□□ 1.42
PDCD2-215ENST00000614056 SNNO75324 88 aaPredicted RBP23.91■■□□□ 1.42
PDCD2-215ENST00000614056 NR4A2P43354 598 aa23.91■■□□□ 1.42
PDCD2-215ENST00000614056 RPS5P46782 204 aaKnown RBP23.91■■□□□ 1.42
PDCD2-215ENST00000614056 C6orf10Q5SRN2 563 aa23.91■■□□□ 1.42
PDCD2-215ENST00000614056 VPS33AQ96AX1 596 aa23.91■■□□□ 1.42
PDCD2-215ENST00000614056 ITCHQ96J02 903 aa23.91■■□□□ 1.42
PDCD2-215ENST00000614056 KATNB1Q9BVA0 655 aa23.91■■□□□ 1.42
PDCD2-215ENST00000614056 ARMC7Q9H6L4 198 aa23.91■■□□□ 1.42
PDCD2-215ENST00000614056 RMND5AQ9H871 391 aa23.91■■□□□ 1.42
PDCD2-215ENST00000614056 A0A096LPI6 279 aa23.9■■□□□ 1.42
PDCD2-215ENST00000614056 A0A0G2JPF8 293 aa23.9■■□□□ 1.42
PDCD2-215ENST00000614056 TMEM247A6NEH6 219 aa23.9■■□□□ 1.42
PDCD2-215ENST00000614056 HNRNPCL2B2RXH8 293 aa23.9■■□□□ 1.42
PDCD2-215ENST00000614056 HNRNPCL3B7ZW38 293 aa23.9■■□□□ 1.42
PDCD2-215ENST00000614056 HNRNPCL1O60812 293 aaKnown RBP23.9■■□□□ 1.42
PDCD2-215ENST00000614056 NPIPB7O75200 414 aa23.9■■□□□ 1.42
PDCD2-215ENST00000614056 CECR9P0C854 216 aa23.9■■□□□ 1.42
PDCD2-215ENST00000614056 ZCCHC18P0CG32 403 aa23.9■■□□□ 1.42
PDCD2-215ENST00000614056 HNRNPCL4P0DMR1 293 aa23.9■■□□□ 1.42
PDCD2-215ENST00000614056 PNMTP11086 282 aa23.9■■□□□ 1.42
PDCD2-215ENST00000614056 IGFBP5P24593 272 aa23.9■■□□□ 1.42
PDCD2-215ENST00000614056 GTF2E2P29084 291 aaKnown RBP23.9■■□□□ 1.42
PDCD2-215ENST00000614056 CLDN17P56750 224 aa23.9■■□□□ 1.42
PDCD2-215ENST00000614056 ROR2Q01974 943 aaKnown RBP23.9■■□□□ 1.42
PDCD2-215ENST00000614056 NAAAQ02083 359 aa23.9■■□□□ 1.42
PDCD2-215ENST00000614056 ZNF311Q5JNZ3 666 aa23.9■■□□□ 1.42
PDCD2-215ENST00000614056 FAM166AQ6J272 317 aa23.9■■□□□ 1.42
PDCD2-215ENST00000614056 ANKRD16Q6P6B7 361 aa23.9■■□□□ 1.42
PDCD2-215ENST00000614056 OR9I1Q8NGQ6 314 aa23.9■■□□□ 1.42
PDCD2-215ENST00000614056 STK35Q8TDR2 534 aa23.9■■□□□ 1.42
PDCD2-215ENST00000614056 FOXN4Q96NZ1 517 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms