RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 IGHV3-20A0A0C4DH32 117 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 CENPXA8MT69 81 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 OR2B3O76000 313 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 UTS2O95399 124 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 PRKAR1AP10644 381 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 RAB3BP20337 219 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 RPS5P46782 204 aaKnown RBP12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 GPR143P51810 404 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 NRG3P56975 720 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 RPL6Q02878 288 aaKnown RBP12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 HES5Q5TA89 166 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 GPALPP1Q8IXQ4 340 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 LSM14AQ8ND56 463 aaKnown RBP12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 DDOQ99489 341 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 NRIP3Q9NQ35 241 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 CUTCQ9NTM9 273 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 NOX1Q9Y5S8 564 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 MED12Q93074 2177 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 TMEM72A0PK05 275 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 OR6C70A6NIJ9 312 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 PIN1P1O15428 100 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 FZD7O75084 574 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 CPNE3O75131 537 aaKnown RBP12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 PLGP00747 810 aaPredicted RBP12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 SYPP08247 313 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 OR8G3PP0DMU2 310 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 PTHLHP12272 177 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 SIRPAP78324 504 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 DGCR2P98153 550 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 SKP2Q13309 424 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 CEP78Q5JTW2 689 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 MARCH3Q86UD3 253 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 SERPINA12Q8IW75 414 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 YIPF7Q8N8F6 280 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 TRIM63Q969Q1 353 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 RNF170Q96K19 258 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 BRD7Q9NPI1 651 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 HAO2Q9NYQ3 351 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 PCDHGB7Q9Y5F8 929 aa12.84□□□□□ -0.35
PCDHGA3-202ENST00000612467 ZNF749O43361 778 aa12.83□□□□□ -0.35
PCDHGA3-202ENST00000612467 UBL4AP11441 157 aa12.83□□□□□ -0.35
PCDHGA3-202ENST00000612467 EVI2BP34910 448 aa12.83□□□□□ -0.35
PCDHGA3-202ENST00000612467 DIO1P49895 249 aa12.83□□□□□ -0.35
PCDHGA3-202ENST00000612467 HSD17B7P56937 341 aa12.83□□□□□ -0.35
PCDHGA3-202ENST00000612467 CTXN1P60606 82 aa12.83□□□□□ -0.35
PCDHGA3-202ENST00000612467 LINC01590Q5TEZ4 76 aa12.83□□□□□ -0.35
PCDHGA3-202ENST00000612467 ZNF433Q8N7K0 673 aaPredicted RBP12.83□□□□□ -0.35
PCDHGA3-202ENST00000612467 ZNF563Q8TA94 476 aa12.83□□□□□ -0.35
PCDHGA3-202ENST00000612467 RGP1Q92546 391 aaPredicted RBP12.83□□□□□ -0.35
PCDHGA3-202ENST00000612467 SMIM19Q96E16 107 aa12.83□□□□□ -0.35
PCDHGA3-202ENST00000612467 GFI1Q99684 422 aa12.83□□□□□ -0.35
PCDHGA3-202ENST00000612467 NUDT9Q9BW91 350 aa12.83□□□□□ -0.35
PCDHGA3-202ENST00000612467 NOX4Q9NPH5 578 aa12.83□□□□□ -0.35
PCDHGA3-202ENST00000612467 INPP5EQ9NRR6 644 aa12.83□□□□□ -0.35
PCDHGA3-202ENST00000612467 MCUBQ9NWR8 336 aa12.83□□□□□ -0.35
PCDHGA3-202ENST00000612467 C2orf72A6NCS6 295 aa12.83□□□□□ -0.36
PCDHGA3-202ENST00000612467 EFCAB7A8K855 629 aa12.83□□□□□ -0.36
PCDHGA3-202ENST00000612467 C11orf98E9PRG8 122 aa12.83□□□□□ -0.36
PCDHGA3-202ENST00000612467 SLC19A2O60779 497 aa12.83□□□□□ -0.36
PCDHGA3-202ENST00000612467 FOLR1P15328 257 aa12.83□□□□□ -0.36
PCDHGA3-202ENST00000612467 BCKDHBP21953 392 aa12.83□□□□□ -0.36
PCDHGA3-202ENST00000612467 TACR3P29371 465 aa12.83□□□□□ -0.36
PCDHGA3-202ENST00000612467 FNDC7Q5VTL7 733 aa12.83□□□□□ -0.36
PCDHGA3-202ENST00000612467 THOC7Q6I9Y2 204 aaKnown RBP12.83□□□□□ -0.36
PCDHGA3-202ENST00000612467 OR5M10Q6IEU7 315 aa12.83□□□□□ -0.36
PCDHGA3-202ENST00000612467 ATG4DQ86TL0 474 aaPredicted RBP12.83□□□□□ -0.36
PCDHGA3-202ENST00000612467 LRRC28Q86X40 367 aaPredicted RBP12.83□□□□□ -0.36
PCDHGA3-202ENST00000612467 GKN2Q86XP6 184 aa12.83□□□□□ -0.36
PCDHGA3-202ENST00000612467 OR1L3Q8NH93 324 aa12.83□□□□□ -0.36
PCDHGA3-202ENST00000612467 SLC2A12Q8TD20 617 aa12.83□□□□□ -0.36
PCDHGA3-202ENST00000612467 TMEM246Q9BRR3 403 aa12.83□□□□□ -0.36
PCDHGA3-202ENST00000612467 ALG12Q9BV10 488 aa12.83□□□□□ -0.36
PCDHGA3-202ENST00000612467 ABCG5Q9H222 651 aa12.83□□□□□ -0.36
PCDHGA3-202ENST00000612467 AUNIPQ9H7T9 357 aa12.83□□□□□ -0.36
PCDHGA3-202ENST00000612467 BEX1Q9HBH7 125 aa12.83□□□□□ -0.36
PCDHGA3-202ENST00000612467 NANSQ9NR45 359 aa12.83□□□□□ -0.36
PCDHGA3-202ENST00000612467 BAIAP2Q9UQB8 552 aa12.83□□□□□ -0.36
PCDHGA3-202ENST00000612467 ZNF337Q9Y3M9 751 aa12.83□□□□□ -0.36
PCDHGA3-202ENST00000612467 RHPN2P1A8MT19 583 aa12.82□□□□□ -0.36
PCDHGA3-202ENST00000612467 METTL12A8MUP2 240 aa12.82□□□□□ -0.36
PCDHGA3-202ENST00000612467 MBTPS2O43462 519 aa12.82□□□□□ -0.36
PCDHGA3-202ENST00000612467 CD27P26842 260 aa12.82□□□□□ -0.36
PCDHGA3-202ENST00000612467 BTCP35070 178 aa12.82□□□□□ -0.36
PCDHGA3-202ENST00000612467 SOX2P48431 317 aa12.82□□□□□ -0.36
PCDHGA3-202ENST00000612467 PITPNBP48739 271 aa12.82□□□□□ -0.36
PCDHGA3-202ENST00000612467 NR0B1P51843 470 aaKnown RBP12.82□□□□□ -0.36
PCDHGA3-202ENST00000612467 SNRPD2P62316 118 aaKnown RBP12.82□□□□□ -0.36
PCDHGA3-202ENST00000612467 ACTC1P68032 377 aa12.82□□□□□ -0.36
PCDHGA3-202ENST00000612467 ACTA1P68133 377 aa12.82□□□□□ -0.36
PCDHGA3-202ENST00000612467 GRM7Q14831 915 aa12.82□□□□□ -0.36
PCDHGA3-202ENST00000612467 ZNF74Q16587 644 aa12.82□□□□□ -0.36
PCDHGA3-202ENST00000612467 DPY19L2P2Q6ZN68 376 aa12.82□□□□□ -0.36
PCDHGA3-202ENST00000612467 LANCL3Q6ZV70 420 aa12.82□□□□□ -0.36
PCDHGA3-202ENST00000612467 OR14A16Q8NHC5 309 aa12.82□□□□□ -0.36
PCDHGA3-202ENST00000612467 PMM1Q92871 262 aa12.82□□□□□ -0.36
PCDHGA3-202ENST00000612467 RNF166Q96A37 237 aaPredicted RBP12.82□□□□□ -0.36
PCDHGA3-202ENST00000612467 ZNF285Q96NJ3 590 aa12.82□□□□□ -0.36
PCDHGA3-202ENST00000612467 LPAR4Q99677 370 aa12.82□□□□□ -0.36
PCDHGA3-202ENST00000612467 ANKRD10Q9NXR5 420 aa12.82□□□□□ -0.36
PCDHGA3-202ENST00000612467 TLCD2A6NGC4 264 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms