RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 ZNF547Q8IVP9 402 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 TMIEQ8NEW7 156 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 CDS1Q92903 461 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 BPIFA2Q96DR5 249 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 VRK1Q99986 396 aaPredicted RBP11.43□□□□□ -0.58
CDCA3-212ENST00000604599 PDCD10Q9BUL8 212 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 GPR174Q9BXC1 333 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 FAM117AQ9C073 453 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 TLNRD1Q9H1K6 362 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 TMEM231Q9H6L2 316 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 C2orf42Q9NWW7 574 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 TINAGQ9UJW2 476 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 MKL2Q9ULH7 1088 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 SIGLEC7Q9Y286 467 aa11.43□□□□□ -0.58
CDCA3-212ENST00000604599 H3BSH0 61 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 TO15178 435 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 IFNA4P05014 189 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 RAB40ALP0C0E4 278 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 GTF2F2P13984 249 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 SYN1P17600 705 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 SRSF3P84103 164 aaKnown RBP11.42□□□□□ -0.58
CDCA3-212ENST00000604599 HYAL4Q2M3T9 481 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 PRAMEF8Q5VWM4 474 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 PRAMEF7Q5VXH5 474 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 DHRS7BQ6IAN0 325 aaPredicted RBP11.42□□□□□ -0.58
CDCA3-212ENST00000604599 RPL22L1Q6P5R6 122 aaKnown RBP11.42□□□□□ -0.58
CDCA3-212ENST00000604599 TMEM71Q6P5X7 295 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 KRT77Q7Z794 578 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 ZNF461Q8TAF7 563 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 SFXN5Q8TD22 340 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 ADAMTS15Q8TE58 950 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 RAB40AQ8WXH6 277 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 SLC35A4Q96G79 324 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 ZNF559Q9BR84 538 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 MFRPQ9BY79 579 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 APMAPQ9HDC9 416 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 LRFN2Q9ULH4 789 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 NOSIPQ9Y314 301 aaKnown RBP11.42□□□□□ -0.58
CDCA3-212ENST00000604599 A0A0D9SG52 128 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 C4orf51C9J302 202 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 EMC8O43402 210 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 SSX5O60225 188 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 ACTL6AO96019 429 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 CSF2RBP32927 897 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 PTGFRP43088 359 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 SOX2P48431 317 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 ACTA2P62736 377 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 ACTG2P63267 376 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 PDZK1IP1Q13113 114 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 OR6N1Q8NGY5 312 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 OR4K13Q8NH42 304 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 MIB2Q96AX9 1013 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 TRMT2BQ96GJ1 504 aaKnown RBP11.42□□□□□ -0.58
CDCA3-212ENST00000604599 ZNF764Q96H86 408 aaPredicted RBP11.42□□□□□ -0.58
CDCA3-212ENST00000604599 NIT2Q9NQR4 276 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 C14orf105Q9NVL8 296 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 CALML5Q9NZT1 146 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 ZNF629Q9UEG4 869 aaPredicted RBP11.42□□□□□ -0.58
CDCA3-212ENST00000604599 WDR45Q9Y484 360 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 PCYT1BQ9Y5K3 369 aaPredicted RBP11.42□□□□□ -0.58
CDCA3-212ENST00000604599 XIRP2A4UGR9 3374 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 TRBV23-1A0A0A0MS06 115 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 MEX3AA1L020 520 aaKnown RBP11.42□□□□□ -0.58
CDCA3-212ENST00000604599 TRAPPC13A5PLN9 417 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 OR14I1A6ND48 311 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 CCSO14618 274 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 GRM6O15303 877 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 NDUFS6O75380 124 aaKnown RBP11.42□□□□□ -0.58
CDCA3-212ENST00000604599 AIFM1O95831 613 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 CTSLP07711 333 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 NFYBP25208 207 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 CD96P40200 585 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 REEP5Q00765 189 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 SLC9A5Q14940 896 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 MPPED2Q15777 294 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 UQCC3Q6UW78 93 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 TMPRSS12Q86WS5 348 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 ARMC10Q8N2F6 343 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 OR52E2Q8NGJ4 325 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 CYB5D2Q8WUJ1 264 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 BCL2L14Q9BZR8 327 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 POFUT1Q9H488 388 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 ZFP57Q9NU63 452 aa11.42□□□□□ -0.58
CDCA3-212ENST00000604599 DHCR7Q9UBM7 475 aaKnown RBP11.42□□□□□ -0.58
CDCA3-212ENST00000604599 NPIPA5A0A0B4J1W7 369 aa11.41□□□□□ -0.58
CDCA3-212ENST00000604599 OR5H14A6NHG9 310 aa11.41□□□□□ -0.58
CDCA3-212ENST00000604599 NPIPA7E9PJI5 369 aa11.41□□□□□ -0.58
CDCA3-212ENST00000604599 H7C417 338 aa11.41□□□□□ -0.58
CDCA3-212ENST00000604599 ERI3O43414 337 aaKnown RBP11.41□□□□□ -0.58
CDCA3-212ENST00000604599 BCL2L11O43521 198 aa11.41□□□□□ -0.58
CDCA3-212ENST00000604599 FADS1O60427 444 aa11.41□□□□□ -0.58
CDCA3-212ENST00000604599 GLSO94925 669 aaPredicted RBP11.41□□□□□ -0.58
CDCA3-212ENST00000604599 NPIPA8P0DM63 369 aa11.41□□□□□ -0.58
CDCA3-212ENST00000604599 NDUFS1P28331 727 aa11.41□□□□□ -0.58
CDCA3-212ENST00000604599 AGTR1P30556 359 aa11.41□□□□□ -0.58
CDCA3-212ENST00000604599 TAF13Q15543 124 aa11.41□□□□□ -0.58
CDCA3-212ENST00000604599 DEFB115Q30KQ5 88 aa11.41□□□□□ -0.58
CDCA3-212ENST00000604599 ZCCHC12Q6PEW1 402 aa11.41□□□□□ -0.58
CDCA3-212ENST00000604599 FAM111BQ6SJ93 734 aa11.41□□□□□ -0.58
CDCA3-212ENST00000604599 UNQ6126/PRO20091Q6UXV3 157 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms