RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 YLPM1P49750 1951 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-223ENST00000600552 IGHV1-18A0A0C4DH31 117 aa15.35■□□□□ 0.05
SHKBP1-223ENST00000600552 H7C417 338 aa15.35■□□□□ 0.05
SHKBP1-223ENST00000600552 UPK3AO75631 287 aa15.35■□□□□ 0.05
SHKBP1-223ENST00000600552 AHSA1O95433 338 aa15.35■□□□□ 0.05
SHKBP1-223ENST00000600552 TFPTP0C1Z6 253 aa15.35■□□□□ 0.05
SHKBP1-223ENST00000600552 SLC25A16P16260 332 aa15.35■□□□□ 0.05
SHKBP1-223ENST00000600552 ZNF16P17020 682 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-223ENST00000600552 RPS5P46782 204 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-223ENST00000600552 POLR2JP52435 117 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-223ENST00000600552 GGTLC2Q14390 218 aa15.35■□□□□ 0.05
SHKBP1-223ENST00000600552 TBRG1Q3YBR2 411 aa15.35■□□□□ 0.05
SHKBP1-223ENST00000600552 TNFAIP8L3Q5GJ75 292 aa15.35■□□□□ 0.05
SHKBP1-223ENST00000600552 ZNF311Q5JNZ3 666 aa15.35■□□□□ 0.05
SHKBP1-223ENST00000600552 CYB5R2Q6BCY4 276 aa15.35■□□□□ 0.05
SHKBP1-223ENST00000600552 CREB3L2Q70SY1 520 aa15.35■□□□□ 0.05
SHKBP1-223ENST00000600552 SLC46A3Q7Z3Q1 461 aa15.35■□□□□ 0.05
SHKBP1-223ENST00000600552 ANKS4BQ8N8V4 417 aa15.35■□□□□ 0.05
SHKBP1-223ENST00000600552 OR1K1Q8NGR3 316 aa15.35■□□□□ 0.05
SHKBP1-223ENST00000600552 RNF217Q8TC41 542 aa15.35■□□□□ 0.05
SHKBP1-223ENST00000600552 C10orf105Q8TEF2 133 aa15.35■□□□□ 0.05
SHKBP1-223ENST00000600552 OR52B2Q96RD2 323 aa15.35■□□□□ 0.05
SHKBP1-223ENST00000600552 ARMC7Q9H6L4 198 aa15.35■□□□□ 0.05
SHKBP1-223ENST00000600552 NKIRAS1Q9NYS0 192 aa15.35■□□□□ 0.05
SHKBP1-223ENST00000600552 RPS6KB2Q9UBS0 482 aa15.35■□□□□ 0.05
SHKBP1-223ENST00000600552 ARFGEF3Q5TH69 2177 aa15.34■□□□□ 0.05
SHKBP1-223ENST00000600552 A0A096LNT2 108 aa15.34■□□□□ 0.05
SHKBP1-223ENST00000600552 ELOA3DA6NLF2 546 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-223ENST00000600552 C5orf58C9J3I9 102 aa15.34■□□□□ 0.05
SHKBP1-223ENST00000600552 UBDO15205 165 aa15.34■□□□□ 0.05
SHKBP1-223ENST00000600552 SNNO75324 88 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-223ENST00000600552 NUDT7P0C024 238 aa15.34■□□□□ 0.05
SHKBP1-223ENST00000600552 USF1P22415 310 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-223ENST00000600552 CBLP22681 906 aa15.34■□□□□ 0.05
SHKBP1-223ENST00000600552 GTF2E2P29084 291 aaKnown RBP15.34■□□□□ 0.05
SHKBP1-223ENST00000600552 MVDP53602 400 aa15.34■□□□□ 0.05
SHKBP1-223ENST00000600552 CLDN17P56750 224 aa15.34■□□□□ 0.05
SHKBP1-223ENST00000600552 SNRPD2P62316 118 aaKnown RBP15.34■□□□□ 0.05
SHKBP1-223ENST00000600552 LOXL1Q08397 574 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-223ENST00000600552 ELOA3BQ3SY89 546 aa15.34■□□□□ 0.05
SHKBP1-223ENST00000600552 CROCCP2Q86T23 111 aa15.34■□□□□ 0.05
SHKBP1-223ENST00000600552 EPHX4Q8IUS5 362 aa15.34■□□□□ 0.05
SHKBP1-223ENST00000600552 ELOA3Q8NG57 546 aa15.34■□□□□ 0.05
SHKBP1-223ENST00000600552 MAL2Q969L2 176 aa15.34■□□□□ 0.05
SHKBP1-223ENST00000600552 SLC38A2Q96QD8 506 aa15.34■□□□□ 0.05
SHKBP1-223ENST00000600552 SPATA9Q9BWV2 254 aa15.34■□□□□ 0.05
SHKBP1-223ENST00000600552 A0A0G2JPF8 293 aa15.33■□□□□ 0.04
SHKBP1-223ENST00000600552 HNRNPCL2B2RXH8 293 aa15.33■□□□□ 0.04
SHKBP1-223ENST00000600552 HNRNPCL3B7ZW38 293 aa15.33■□□□□ 0.04
SHKBP1-223ENST00000600552 SLCO1B7G3V0H7 640 aa15.33■□□□□ 0.04
SHKBP1-223ENST00000600552 HNRNPCL1O60812 293 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-223ENST00000600552 F12P00748 615 aaPredicted RBP15.33■□□□□ 0.04
SHKBP1-223ENST00000600552 HNRNPCL4P0DMR1 293 aa15.33■□□□□ 0.04
SHKBP1-223ENST00000600552 PDLIM4P50479 330 aa15.33■□□□□ 0.04
SHKBP1-223ENST00000600552 MAGOHP61326 146 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-223ENST00000600552 LSM11P83369 360 aaKnown RBP eCLIP15.33■□□□□ 0.04
SHKBP1-223ENST00000600552 SLC2A7Q6PXP3 512 aa15.33■□□□□ 0.04
SHKBP1-223ENST00000600552 LINGO2Q7L985 606 aa15.33■□□□□ 0.04
SHKBP1-223ENST00000600552 PHC2Q8IXK0 858 aa15.33■□□□□ 0.04
SHKBP1-223ENST00000600552 MIER2Q8N344 545 aa15.33■□□□□ 0.04
SHKBP1-223ENST00000600552 ARIH2OSQ8N7S6 290 aa15.33■□□□□ 0.04
SHKBP1-223ENST00000600552 BCL2L2Q92843 193 aaPredicted RBP15.33■□□□□ 0.04
SHKBP1-223ENST00000600552 CHODLQ9H9P2 273 aa15.33■□□□□ 0.04
SHKBP1-223ENST00000600552 ZIM2Q9NZV7 527 aa15.33■□□□□ 0.04
SHKBP1-223ENST00000600552 SEC14L4Q9UDX3 406 aa15.33■□□□□ 0.04
SHKBP1-223ENST00000600552 RASD1Q9Y272 281 aa15.33■□□□□ 0.04
SHKBP1-223ENST00000600552 CHST2Q9Y4C5 530 aa15.33■□□□□ 0.04
SHKBP1-223ENST00000600552 FKBP7Q9Y680 259 aa15.33■□□□□ 0.04
SHKBP1-223ENST00000600552 VAMP5O95183 116 aa15.32■□□□□ 0.04
SHKBP1-223ENST00000600552 CRYAAP02489 173 aa15.32■□□□□ 0.04
SHKBP1-223ENST00000600552 IGHV4-31P0DP07 118 aa15.32■□□□□ 0.04
SHKBP1-223ENST00000600552 SERPINF1P36955 418 aa15.32■□□□□ 0.04
SHKBP1-223ENST00000600552 CAPZA2P47755 286 aa15.32■□□□□ 0.04
SHKBP1-223ENST00000600552 P2RY4P51582 365 aa15.32■□□□□ 0.04
SHKBP1-223ENST00000600552 ARF1P84077 181 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-223ENST00000600552 VLDLRP98155 873 aa15.32■□□□□ 0.04
SHKBP1-223ENST00000600552 ROR2Q01974 943 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-223ENST00000600552 C1DQ13901 141 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-223ENST00000600552 MST1LQ2TV78 715 aa15.32■□□□□ 0.04
SHKBP1-223ENST00000600552 IQCCQ4KMZ1 466 aa15.32■□□□□ 0.04
SHKBP1-223ENST00000600552 RNF220Q5VTB9 566 aa15.32■□□□□ 0.04
SHKBP1-223ENST00000600552 IL17RELQ6ZVW7 336 aa15.32■□□□□ 0.04
SHKBP1-223ENST00000600552 MAVSQ7Z434 540 aa15.32■□□□□ 0.04
SHKBP1-223ENST00000600552 KTI12Q96EK9 354 aaPredicted RBP15.32■□□□□ 0.04
SHKBP1-223ENST00000600552 SORCS2Q96PQ0 1159 aa15.32■□□□□ 0.04
SHKBP1-223ENST00000600552 SHARPINQ9H0F6 387 aa15.32■□□□□ 0.04
SHKBP1-223ENST00000600552 SEC61A2Q9H9S3 476 aa15.32■□□□□ 0.04
SHKBP1-223ENST00000600552 CDC42EP3Q9UKI2 254 aa15.32■□□□□ 0.04
SHKBP1-223ENST00000600552 RAB21Q9UL25 225 aa15.32■□□□□ 0.04
SHKBP1-223ENST00000600552 IFT52Q9Y366 437 aa15.32■□□□□ 0.04
SHKBP1-223ENST00000600552 DSPPQ9NZW4 1301 aa15.32■□□□□ 0.04
SHKBP1-223ENST00000600552 CLIC1O00299 241 aa15.31■□□□□ 0.04
SHKBP1-223ENST00000600552 PHF1O43189 567 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-223ENST00000600552 CSF3P09919 207 aa15.31■□□□□ 0.04
SHKBP1-223ENST00000600552 OR4A8P0C604 315 aa15.31■□□□□ 0.04
SHKBP1-223ENST00000600552 ZCCHC18P0CG32 403 aa15.31■□□□□ 0.04
SHKBP1-223ENST00000600552 PNMTP11086 282 aa15.31■□□□□ 0.04
SHKBP1-223ENST00000600552 ZNF43P17038 809 aa15.31■□□□□ 0.04
SHKBP1-223ENST00000600552 SWI5Q1ZZU3 235 aa15.31■□□□□ 0.04
SHKBP1-223ENST00000600552 CARD17Q5XLA6 110 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms