RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 MT-ATP6P00846 226 aa17.86■□□□□ 0.45
SHKBP1-222ENST00000600320 ASAH2BP0C7U1 165 aa17.86■□□□□ 0.45
SHKBP1-222ENST00000600320 FCGR1AP12314 374 aa17.86■□□□□ 0.45
SHKBP1-222ENST00000600320 GTF2E2P29084 291 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-222ENST00000600320 ELF3P78545 371 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-222ENST00000600320 ABLIM2Q6H8Q1 611 aa17.86■□□□□ 0.45
SHKBP1-222ENST00000600320 ZNF770Q6IQ21 691 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-222ENST00000600320 PGBD2Q6P3X8 592 aa17.86■□□□□ 0.45
SHKBP1-222ENST00000600320 RRM2BQ7LG56 351 aa17.86■□□□□ 0.45
SHKBP1-222ENST00000600320 MAMDC2Q7Z304 686 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-222ENST00000600320 FJX1Q86VR8 437 aa17.86■□□□□ 0.45
SHKBP1-222ENST00000600320 C10orf67Q8IYJ2 551 aa17.86■□□□□ 0.45
SHKBP1-222ENST00000600320 PIGXQ8TBF5 258 aa17.86■□□□□ 0.45
SHKBP1-222ENST00000600320 LIPHQ8WWY8 451 aa17.86■□□□□ 0.45
SHKBP1-222ENST00000600320 ZHX1-C8orf76Q96EF9 292 aa17.86■□□□□ 0.45
SHKBP1-222ENST00000600320 NAA11Q9BSU3 229 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-222ENST00000600320 RNF122Q9H9V4 155 aa17.86■□□□□ 0.45
SHKBP1-222ENST00000600320 CHST11Q9NPF2 352 aa17.86■□□□□ 0.45
SHKBP1-222ENST00000600320 KLHL13Q9P2N7 655 aa17.86■□□□□ 0.45
SHKBP1-222ENST00000600320 ING1Q9UK53 422 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-222ENST00000600320 CLEC4AQ9UMR7 237 aa17.86■□□□□ 0.45
SHKBP1-222ENST00000600320 CDC42EP2O14613 210 aa17.85■□□□□ 0.45
SHKBP1-222ENST00000600320 KLF4O43474 513 aa17.85■□□□□ 0.45
SHKBP1-222ENST00000600320 EIF1BO60739 113 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-222ENST00000600320 CYTIPO60759 359 aa17.85■□□□□ 0.45
SHKBP1-222ENST00000600320 DNAJA1P31689 397 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-222ENST00000600320 PMPCAQ10713 525 aa17.85■□□□□ 0.45
SHKBP1-222ENST00000600320 MFSD13AQ14CX5 517 aa17.85■□□□□ 0.45
SHKBP1-222ENST00000600320 MICAQ29983 383 aa17.85■□□□□ 0.45
SHKBP1-222ENST00000600320 TMPRSS11FQ6ZWK6 438 aa17.85■□□□□ 0.45
SHKBP1-222ENST00000600320 KDM8Q8N371 416 aa17.85■□□□□ 0.45
SHKBP1-222ENST00000600320 NAXEQ8NCW5 288 aa17.85■□□□□ 0.45
SHKBP1-222ENST00000600320 OR10G2Q8NGC3 310 aa17.85■□□□□ 0.45
SHKBP1-222ENST00000600320 OR13C2Q8NGS9 318 aa17.85■□□□□ 0.45
SHKBP1-222ENST00000600320 PHF3Q92576 2039 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-222ENST00000600320 ZNF462Q96JM2 2506 aa17.85■□□□□ 0.45
SHKBP1-222ENST00000600320 ASPNQ9BXN1 380 aa17.85■□□□□ 0.45
SHKBP1-222ENST00000600320 SEMA6AQ9H2E6 1030 aa17.85■□□□□ 0.45
SHKBP1-222ENST00000600320 NANSQ9NR45 359 aa17.85■□□□□ 0.45
SHKBP1-222ENST00000600320 MRPL39Q9NYK5 338 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-222ENST00000600320 ZNF229Q9UJW7 825 aa17.85■□□□□ 0.45
SHKBP1-222ENST00000600320 CORINQ9Y5Q5 1042 aa17.85■□□□□ 0.45
SHKBP1-222ENST00000600320 MAGED1Q9Y5V3 778 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-222ENST00000600320 DOCK7Q96N67 2140 aa17.84■□□□□ 0.45
SHKBP1-222ENST00000600320 EFCAB9A8MZ26 197 aa17.84■□□□□ 0.45
SHKBP1-222ENST00000600320 LRRTM2O43300 516 aa17.84■□□□□ 0.45
SHKBP1-222ENST00000600320 E2F6O75461 281 aa17.84■□□□□ 0.45
SHKBP1-222ENST00000600320 HPRP00739 348 aa17.84■□□□□ 0.45
SHKBP1-222ENST00000600320 CEACAM8P31997 349 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-222ENST00000600320 TIMP3P35625 211 aa17.84■□□□□ 0.45
SHKBP1-222ENST00000600320 FOXF2Q12947 444 aa17.84■□□□□ 0.45
SHKBP1-222ENST00000600320 GK3PQ14409 553 aa17.84■□□□□ 0.45
SHKBP1-222ENST00000600320 C4orf17Q53FE4 359 aa17.84■□□□□ 0.45
SHKBP1-222ENST00000600320 ANKRD34AQ69YU3 496 aa17.84■□□□□ 0.45
SHKBP1-222ENST00000600320 C1orf94Q6P1W5 598 aa17.84■□□□□ 0.45
SHKBP1-222ENST00000600320 H1FNTQ75WM6 255 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-222ENST00000600320 GCNT2Q8N0V5 402 aa17.84■□□□□ 0.45
SHKBP1-222ENST00000600320 SCAIQ8N9R8 606 aa17.84■□□□□ 0.45
SHKBP1-222ENST00000600320 OR5J2Q8NH18 312 aa17.84■□□□□ 0.45
SHKBP1-222ENST00000600320 GIPC3Q8TF64 312 aa17.84■□□□□ 0.45
SHKBP1-222ENST00000600320 STMN2Q93045 179 aa17.84■□□□□ 0.45
SHKBP1-222ENST00000600320 PSD2Q9BQI7 771 aa17.84■□□□□ 0.45
SHKBP1-222ENST00000600320 C6orf203Q9P0P8 240 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-222ENST00000600320 TMEM5Q9Y2B1 443 aa17.84■□□□□ 0.45
SHKBP1-222ENST00000600320 MED12LQ86YW9 2145 aa17.84■□□□□ 0.45
SHKBP1-222ENST00000600320 A0A1B0GUH1 482 aa17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 HTR3EA5X5Y0 456 aa17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 ZNF716A6NP11 495 aa17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 MS4A18H0YCH9 400 aa17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 PLPP3O14495 311 aa17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 RCBTB2O95199 551 aa17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 GASTP01350 101 aa17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 SAGP10523 405 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 FCGR2AP12318 317 aa17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 ADORA2A-AS1P86434 159 aa17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 PMS2P3Q13401 168 aa17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 FHL1Q13642 323 aa17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 MS4A18Q3C1V0 323 aa17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 RIPPLY2Q5TAB7 128 aa17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 TMEM211Q6ICI0 200 aa17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 SHQ1Q6PI26 577 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 AQP11Q8NBQ7 271 aa17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 ADPRHL1Q8NDY3 354 aa17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 GNPDA2Q8TDQ7 276 aa17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 INTS12Q96CB8 462 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 TM9SF2Q99805 663 aa17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 BDH2Q9BUT1 245 aa17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 TAS2R5Q9NYW4 299 aa17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 PDP1Q9P0J1 537 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 B3GAT1Q9P2W7 334 aa17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 B3GALT5Q9Y2C3 310 aa17.83■□□□□ 0.44
SHKBP1-222ENST00000600320 TRAV27A0A087WT01 109 aa17.82■□□□□ 0.44
SHKBP1-222ENST00000600320 A0A0G2JNJ9 132 aa17.82■□□□□ 0.44
SHKBP1-222ENST00000600320 PRKACGP22612 351 aa17.82■□□□□ 0.44
SHKBP1-222ENST00000600320 GSSP48637 474 aa17.82■□□□□ 0.44
SHKBP1-222ENST00000600320 RASGEF1BQ0VAM2 473 aa17.82■□□□□ 0.44
SHKBP1-222ENST00000600320 SLC17A1Q14916 467 aa17.82■□□□□ 0.44
SHKBP1-222ENST00000600320 GUSBP1Q15486 140 aa17.82■□□□□ 0.44
SHKBP1-222ENST00000600320 MYO7BQ6PIF6 2116 aa17.82■□□□□ 0.44
SHKBP1-222ENST00000600320 NANOGNBQ7Z5D8 188 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms