RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 A0A087WUU8 490 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 A1L4Q6 167 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 FAM90A27PA6NNH2 459 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 DVL2O14641 736 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 IGF2P01344 180 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 MT-ND1P03886 318 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 CD8BP10966 210 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 IGFBP2P18065 325 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 CBLP22681 906 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 RBM34P42696 430 aaKnown RBP12.21□□□□□ -0.45
VRK3-219ENST00000600137 RASSF2P50749 326 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 SIRPAP78324 504 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 ZNF74Q16587 644 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 OTUD3Q5T2D3 398 aaPredicted RBP12.21□□□□□ -0.45
VRK3-219ENST00000600137 EEF1A1P5Q5VTE0 462 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 PPP4R4Q6NUP7 873 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 TTC33Q6PID6 262 aaPredicted RBP12.21□□□□□ -0.45
VRK3-219ENST00000600137 TBPL2Q6SJ96 375 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 ADGRG5Q8IZF4 528 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 LRRC17Q8N6Y2 441 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 ZNF610Q8N9Z0 462 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 OR6K3Q8NGY3 331 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 PFN4Q8NHR9 129 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 SLC7A13Q8TCU3 470 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 TMEM239Q8WW34 195 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 LIPHQ8WWY8 451 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 SLC25A36Q96CQ1 311 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 HS6ST2Q96MM7 605 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 NAA11Q9BSU3 229 aaPredicted RBP12.21□□□□□ -0.45
VRK3-219ENST00000600137 KCNJ16Q9NPI9 418 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 KLHL9Q9P2J3 617 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 FLVCR1Q9Y5Y0 555 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 DCHS2Q6V1P9 2916 aa12.21□□□□□ -0.45
VRK3-219ENST00000600137 LOC102725191A0A1B0GVB3 256 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 A0A1W2PRQ8 180 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 TCRBV3S1A0A5B6 114 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 AQP12BA6NM10 295 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 M0R082 166 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 EBAG9O00559 213 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 MSTNO14793 375 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 PIP5K1CO60331 668 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 HPRP00739 348 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 TSPAN19P0C672 248 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 ASAH2BP0C7U1 165 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 COL8A1P27658 744 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 FHL1Q13642 323 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 DGCR6Q14129 220 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 TRAM2Q15035 370 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 H1FNTQ75WM6 255 aaPredicted RBP12.2□□□□□ -0.46
VRK3-219ENST00000600137 MAMDC2Q7Z304 686 aaPredicted RBP12.2□□□□□ -0.46
VRK3-219ENST00000600137 EPHX4Q8IUS5 362 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 AQP12AQ8IXF9 295 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 KDM8Q8N371 416 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 CNEP1R1Q8N9A8 125 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 ZNF417Q8TAU3 575 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 PIGXQ8TBF5 258 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 ZHX1-C8orf76Q96EF9 292 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 ZNF587Q96SQ5 575 aaPredicted RBP12.2□□□□□ -0.46
VRK3-219ENST00000600137 SEPHS2Q99611 448 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 EPYCQ99645 322 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 FNDC11Q9BVV2 318 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 TAPBPLQ9BX59 468 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 OPN3Q9H1Y3 402 aaPredicted RBP12.2□□□□□ -0.46
VRK3-219ENST00000600137 MMADHCQ9H3L0 296 aaPredicted RBP12.2□□□□□ -0.46
VRK3-219ENST00000600137 PIGMQ9H3S5 423 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 CHST11Q9NPF2 352 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 FANCFQ9NPI8 374 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 MRPL39Q9NYK5 338 aaKnown RBP12.2□□□□□ -0.46
VRK3-219ENST00000600137 PKDREJQ9NTG1 2253 aa12.2□□□□□ -0.46
VRK3-219ENST00000600137 ENO4A6NNW6 628 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 KPNA4O00629 521 aaPredicted RBP12.19□□□□□ -0.46
VRK3-219ENST00000600137 PLPP3O14495 311 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 CH25HO95992 272 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 LIMS1P48059 325 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 ASCL1P50553 236 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 HMGA2P52926 109 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 CTBP2P56545 445 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 FOXD4Q12950 439 aaPredicted RBP12.19□□□□□ -0.46
VRK3-219ENST00000600137 POU4F3Q15319 338 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 SEC23BQ15437 767 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 TFAP2EQ6VUC0 442 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 CCDC121Q6ZUS5 278 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 CREB3L2Q70SY1 520 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 ZDHHC21Q8IVQ6 265 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 WDFY1Q8IWB7 410 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 MCEMP1Q8IX19 187 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 SCAIQ8N9R8 606 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 ADPRHL1Q8NDY3 354 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 OR9K2Q8NGE7 335 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 CANT1Q8WVQ1 401 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 ACOT11Q8WXI4 607 aaPredicted RBP12.19□□□□□ -0.46
VRK3-219ENST00000600137 SLCO4A1Q96BD0 722 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 ZNF385AQ96PM9 386 aaKnown RBP12.19□□□□□ -0.46
VRK3-219ENST00000600137 PIP5K1AQ99755 562 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 SF3B5Q9BWJ5 86 aaKnown RBP12.19□□□□□ -0.46
VRK3-219ENST00000600137 ENKD1Q9H0I2 346 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 ANKRD19PQ9H560 264 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 MAGIXQ9H6Y5 334 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 TAS2R5Q9NYW4 299 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 PLEKHB1Q9UF11 243 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms