RNA–Protein interactions for RNA: ENST00000599848.5

UPF1-207, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 1 (best) BASIC

Gene UPF1, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-207ENST00000599848 SHARPINQ9H0F6 387 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 C6orf106Q9H6K1 298 aaPredicted RBP18.98■□□□□ 0.63
UPF1-207ENST00000599848 PRSS21Q9Y6M0 314 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 MEN1O00255 615 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 GORASP2Q9H8Y8 452 aa18.98■□□□□ 0.63
UPF1-207ENST00000599848 SNNO75324 88 aaPredicted RBP18.97■□□□□ 0.63
UPF1-207ENST00000599848 SCCPDHQ8NBX0 429 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 ANKRD9Q96BM1 317 aaPredicted RBP18.97■□□□□ 0.63
UPF1-207ENST00000599848 ZNF281Q9Y2X9 895 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 CSNK1G3Q9Y6M4 447 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 CLN5O75503 358 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 BDKRB2P30411 391 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 BIDP55957 195 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 PLAG1Q6DJT9 500 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 ZNF582Q96NG8 517 aaPredicted RBP18.97■□□□□ 0.63
UPF1-207ENST00000599848 CLMPQ9H6B4 373 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 CACFD1Q9UGQ2 172 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 PRAMEF4O60810 478 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 CXCL10P02778 98 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 BMP2P12643 396 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 DEFA4P12838 97 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 PTGS2P35354 604 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 BCL6P41182 706 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 H1FNTQ75WM6 255 aaPredicted RBP18.97■□□□□ 0.63
UPF1-207ENST00000599848 SLC35D2Q76EJ3 337 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 SORBS1Q9BX66 1292 aaKnown RBP18.97■□□□□ 0.63
UPF1-207ENST00000599848 OLAHQ9NV23 265 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 RNF24Q9Y225 148 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 POU2F2P09086 479 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 ELAVL4P26378 380 aaKnown RBP18.97■□□□□ 0.63
UPF1-207ENST00000599848 P2RX1P51575 399 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 CXCR4P61073 352 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 SELENBP1Q13228 472 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 GPR19Q15760 415 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 TMEM174Q8WUU8 243 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 SMOXQ9NWM0 555 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 WBP1LQ9NX94 342 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 TMEM181Q9P2C4 612 aa18.97■□□□□ 0.63
UPF1-207ENST00000599848 NSA2O95478 260 aaKnown RBP18.96■□□□□ 0.63
UPF1-207ENST00000599848 BMXP51813 675 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 ZNF133P52736 654 aaPredicted RBP18.96■□□□□ 0.63
UPF1-207ENST00000599848 ACSM3Q53FZ2 586 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 FAM74A1Q5RGS3 127 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 PODNL1Q6PEZ8 512 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 SYT13Q7L8C5 426 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 BTLAQ7Z6A9 289 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 NUDT22Q9BRQ3 303 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 CCL26Q9Y258 94 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 I3L521 148 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 ETV5P41161 510 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 PIP5KL1Q5T9C9 394 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 DPY19L2P2Q6ZN68 376 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 GTPBP8Q8N3Z3 284 aaPredicted RBP18.96■□□□□ 0.63
UPF1-207ENST00000599848 ENDOVQ8N8Q3 282 aaKnown RBP18.96■□□□□ 0.63
UPF1-207ENST00000599848 MIB2Q96AX9 1013 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 CNIH1O95406 144 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 OPN1LWP04000 364 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 CLEC3BP05452 202 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 IMPA1P29218 277 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 EDDM3BP56851 147 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 IQCF1Q8N6M8 205 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 NPFFR2Q9Y5X5 522 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.96■□□□□ 0.63
UPF1-207ENST00000599848 FAM166BA8MTA8 275 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 CAMK2BQ13554 666 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 OR7E24Q6IFN5 339 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 SPRED1Q7Z699 444 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 ZC3HAV1LQ96H79 300 aaKnown RBP18.96■□□□□ 0.63
UPF1-207ENST00000599848 SSX3Q99909 188 aa18.96■□□□□ 0.63
UPF1-207ENST00000599848 IHHQ14623 411 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 CBLL1Q75N03 491 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 CAMKMTQ7Z624 323 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 CADM4Q8NFZ8 388 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 OR51A2Q8NGJ7 313 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 WDR76Q9H967 626 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 PCDHGA1Q9Y5H4 931 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 NUBP2Q9Y5Y2 271 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 G3V2L1 256 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 CRYZL1O95825 349 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 GNB2P62879 340 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 HBG1P69891 147 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 HBG2P69892 147 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 SLCO4C1Q6ZQN7 724 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 MAELQ96JY0 434 aaKnown RBP18.95■□□□□ 0.62
UPF1-207ENST00000599848 TSNAXQ99598 290 aaKnown RBP18.95■□□□□ 0.62
UPF1-207ENST00000599848 TMEM59Q9BXS4 323 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 SLC23A2Q9UGH3 650 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 H3BSA7 217 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 MPPED2Q15777 294 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 SLC48A1Q6P1K1 146 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 SLC22A25Q6T423 547 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 OR8J2Q8NGG1 315 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 BRIX1Q8TDN6 353 aaKnown RBP18.95■□□□□ 0.62
UPF1-207ENST00000599848 LIPHQ8WWY8 451 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 BTF3L4Q96K17 158 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 MBOAT4Q96T53 435 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 JAM3Q9BX67 310 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 SYNPO2LQ9H987 977 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 BABAM2Q9NXR7 383 aa18.95■□□□□ 0.62
UPF1-207ENST00000599848 SERPINA7P05543 415 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms