RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 ANKRD16Q6P6B7 361 aa18.4■□□□□ 0.54
PNKP-212ENST00000599454 ZNF621Q6ZSS3 439 aa18.4■□□□□ 0.54
PNKP-212ENST00000599454 CREB3L2Q70SY1 520 aa18.4■□□□□ 0.54
PNKP-212ENST00000599454 ANKS4BQ8N8V4 417 aa18.4■□□□□ 0.54
PNKP-212ENST00000599454 ALKBH3Q96Q83 286 aaPredicted RBP18.4■□□□□ 0.54
PNKP-212ENST00000599454 SORT1Q99523 831 aa18.4■□□□□ 0.54
PNKP-212ENST00000599454 TMEM109Q9BVC6 243 aa18.4■□□□□ 0.54
PNKP-212ENST00000599454 NUF2Q9BZD4 464 aa18.4■□□□□ 0.54
PNKP-212ENST00000599454 LINC00470Q9BZP3 86 aa18.4■□□□□ 0.54
PNKP-212ENST00000599454 BPESC1Q9GZL8 116 aa18.4■□□□□ 0.54
PNKP-212ENST00000599454 MEAF6Q9HAF1 191 aa18.4■□□□□ 0.54
PNKP-212ENST00000599454 CALML5Q9NZT1 146 aa18.4■□□□□ 0.54
PNKP-212ENST00000599454 VSTM5A8MXK1 200 aa18.39■□□□□ 0.53
PNKP-212ENST00000599454 FRS3O43559 492 aa18.39■□□□□ 0.53
PNKP-212ENST00000599454 IGLV1-44P01699 117 aa18.39■□□□□ 0.53
PNKP-212ENST00000599454 PGRP06401 933 aa18.39■□□□□ 0.53
PNKP-212ENST00000599454 ERCC1P07992 297 aaPredicted RBP18.39■□□□□ 0.53
PNKP-212ENST00000599454 CECR9P0C854 216 aa18.39■□□□□ 0.53
PNKP-212ENST00000599454 GIFP27352 417 aa18.39■□□□□ 0.53
PNKP-212ENST00000599454 ACAA2P42765 397 aaKnown RBP18.39■□□□□ 0.53
PNKP-212ENST00000599454 PRAMEF8Q5VWM4 474 aa18.39■□□□□ 0.53
PNKP-212ENST00000599454 PRAMEF7Q5VXH5 474 aa18.39■□□□□ 0.53
PNKP-212ENST00000599454 CADM2Q8N3J6 435 aa18.39■□□□□ 0.53
PNKP-212ENST00000599454 ANKK1Q8NFD2 765 aa18.39■□□□□ 0.53
PNKP-212ENST00000599454 NUP37Q8NFH4 326 aa18.39■□□□□ 0.53
PNKP-212ENST00000599454 OR52P1PQ8NH57 321 aa18.39■□□□□ 0.53
PNKP-212ENST00000599454 OR52E6Q96RD3 313 aa18.39■□□□□ 0.53
PNKP-212ENST00000599454 C20orf27Q9GZN8 174 aa18.39■□□□□ 0.53
PNKP-212ENST00000599454 ZNF442Q9H7R0 627 aa18.39■□□□□ 0.53
PNKP-212ENST00000599454 SSU72Q9NP77 194 aaKnown RBP18.39■□□□□ 0.53
PNKP-212ENST00000599454 RLIMQ9NVW2 624 aa18.39■□□□□ 0.53
PNKP-212ENST00000599454 P2RX2Q9UBL9 471 aa18.39■□□□□ 0.53
PNKP-212ENST00000599454 DSPPQ9NZW4 1301 aa18.39■□□□□ 0.53
PNKP-212ENST00000599454 TM9SF1O15321 606 aa18.38■□□□□ 0.53
PNKP-212ENST00000599454 STAMBPO95630 424 aa18.38■□□□□ 0.53
PNKP-212ENST00000599454 IGKV3-15P01624 115 aa18.38■□□□□ 0.53
PNKP-212ENST00000599454 TFPTP0C1Z6 253 aa18.38■□□□□ 0.53
PNKP-212ENST00000599454 GKN3PP0CG01 181 aa18.38■□□□□ 0.53
PNKP-212ENST00000599454 CDKN2CP42773 168 aa18.38■□□□□ 0.53
PNKP-212ENST00000599454 UFM1P61960 85 aa18.38■□□□□ 0.53
PNKP-212ENST00000599454 CR1LQ2VPA4 569 aa18.38■□□□□ 0.53
PNKP-212ENST00000599454 COX20Q5RI15 118 aa18.38■□□□□ 0.53
PNKP-212ENST00000599454 RNF220Q5VTB9 566 aa18.38■□□□□ 0.53
PNKP-212ENST00000599454 C1orf140Q5VVS0 124 aa18.38■□□□□ 0.53
PNKP-212ENST00000599454 NIPAL3Q6P499 406 aa18.38■□□□□ 0.53
PNKP-212ENST00000599454 ZNF836Q6ZNA1 936 aa18.38■□□□□ 0.53
PNKP-212ENST00000599454 STK35Q8TDR2 534 aa18.38■□□□□ 0.53
PNKP-212ENST00000599454 NEU4Q8WWR8 484 aaPredicted RBP18.38■□□□□ 0.53
PNKP-212ENST00000599454 HPS1Q92902 700 aa18.38■□□□□ 0.53
PNKP-212ENST00000599454 TEX37Q96LM6 180 aa18.38■□□□□ 0.53
PNKP-212ENST00000599454 ZBTB18Q99592 522 aa18.38■□□□□ 0.53
PNKP-212ENST00000599454 AIG1Q9NVV5 245 aa18.38■□□□□ 0.53
PNKP-212ENST00000599454 ANK2Q01484 3957 aa18.37■□□□□ 0.53
PNKP-212ENST00000599454 RPL36A-HNRNPH2H7BZ11 118 aa18.37■□□□□ 0.53
PNKP-212ENST00000599454 NPIPB7O75200 414 aa18.37■□□□□ 0.53
PNKP-212ENST00000599454 CHN2P52757 468 aa18.37■□□□□ 0.53
PNKP-212ENST00000599454 CRISP3P54108 245 aa18.37■□□□□ 0.53
PNKP-212ENST00000599454 BNIP2Q12982 314 aa18.37■□□□□ 0.53
PNKP-212ENST00000599454 LARS2Q15031 903 aaKnown RBP18.37■□□□□ 0.53
PNKP-212ENST00000599454 VHLLQ6RSH7 139 aa18.37■□□□□ 0.53
PNKP-212ENST00000599454 VRK2Q86Y07 508 aa18.37■□□□□ 0.53
PNKP-212ENST00000599454 EPHX4Q8IUS5 362 aa18.37■□□□□ 0.53
PNKP-212ENST00000599454 RFLNBQ8N5W9 214 aa18.37■□□□□ 0.53
PNKP-212ENST00000599454 GLB1L3Q8NCI6 653 aaPredicted RBP18.37■□□□□ 0.53
PNKP-212ENST00000599454 PNPT1Q8TCS8 783 aaKnown RBP18.37■□□□□ 0.53
PNKP-212ENST00000599454 NELFAQ9H3P2 528 aa18.37■□□□□ 0.53
PNKP-212ENST00000599454 ARMC7Q9H6L4 198 aa18.37■□□□□ 0.53
PNKP-212ENST00000599454 RCE1Q9Y256 329 aa18.37■□□□□ 0.53
PNKP-212ENST00000599454 PCDHB14Q9Y5E9 798 aa18.37■□□□□ 0.53
PNKP-212ENST00000599454 NR5A2O00482 541 aa18.36■□□□□ 0.53
PNKP-212ENST00000599454 UPK3AO75631 287 aa18.36■□□□□ 0.53
PNKP-212ENST00000599454 AHSA1O95433 338 aa18.36■□□□□ 0.53
PNKP-212ENST00000599454 GSNP06396 782 aa18.36■□□□□ 0.53
PNKP-212ENST00000599454 TACSTD2P09758 323 aa18.36■□□□□ 0.53
PNKP-212ENST00000599454 ALDOCP09972 364 aaKnown RBP18.36■□□□□ 0.53
PNKP-212ENST00000599454 NCF2P19878 526 aaPredicted RBP18.36■□□□□ 0.53
PNKP-212ENST00000599454 NPR2P20594 1047 aa18.36■□□□□ 0.53
PNKP-212ENST00000599454 NME5P56597 212 aa18.36■□□□□ 0.53
PNKP-212ENST00000599454 VSNL1P62760 191 aa18.36■□□□□ 0.53
PNKP-212ENST00000599454 SRSF2Q01130 221 aaKnown RBP18.36■□□□□ 0.53
PNKP-212ENST00000599454 LGALS3BPQ08380 585 aa18.36■□□□□ 0.53
PNKP-212ENST00000599454 MAPK11Q15759 364 aa18.36■□□□□ 0.53
PNKP-212ENST00000599454 UGT2A3Q6UWM9 527 aa18.36■□□□□ 0.53
PNKP-212ENST00000599454 LINGO2Q7L985 606 aa18.36■□□□□ 0.53
PNKP-212ENST00000599454 LSRQ86X29 649 aaPredicted RBP18.36■□□□□ 0.53
PNKP-212ENST00000599454 MFSD8Q8NHS3 518 aa18.36■□□□□ 0.53
PNKP-212ENST00000599454 AENQ8WTP8 325 aaKnown RBP18.36■□□□□ 0.53
PNKP-212ENST00000599454 ANKRD27Q96NW4 1050 aa18.36■□□□□ 0.53
PNKP-212ENST00000599454 CACYBPQ9HB71 228 aaKnown RBP18.36■□□□□ 0.53
PNKP-212ENST00000599454 ZNF232Q9UNY5 417 aa18.36■□□□□ 0.53
PNKP-212ENST00000599454 ZNF443Q9Y2A4 671 aaPredicted RBP18.36■□□□□ 0.53
PNKP-212ENST00000599454 A0A096LPE4 126 aa18.35■□□□□ 0.53
PNKP-212ENST00000599454 A0A1W2PPZ6 126 aa18.35■□□□□ 0.53
PNKP-212ENST00000599454 TMEM229AB2RXF0 380 aa18.35■□□□□ 0.53
PNKP-212ENST00000599454 hCG_2039718K7EN88 272 aa18.35■□□□□ 0.53
PNKP-212ENST00000599454 RFXANKO14593 260 aa18.35■□□□□ 0.53
PNKP-212ENST00000599454 DAOP14920 347 aa18.35■□□□□ 0.53
PNKP-212ENST00000599454 CBR1P16152 277 aa18.35■□□□□ 0.53
PNKP-212ENST00000599454 IL12AP29459 219 aa18.35■□□□□ 0.53
PNKP-212ENST00000599454 CALCRP30988 508 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms