RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 ANKK1Q8NFD2 765 aa14.83□□□□□ -0.04
PNKP-210ENST00000597965 MAGEE2Q8TD90 523 aaPredicted RBP14.83□□□□□ -0.04
PNKP-210ENST00000597965 MSI2Q96DH6 328 aaKnown RBP14.83□□□□□ -0.04
PNKP-210ENST00000597965 AURKBQ96GD4 344 aaPredicted RBP14.83□□□□□ -0.04
PNKP-210ENST00000597965 SORCS2Q96PQ0 1159 aa14.83□□□□□ -0.04
PNKP-210ENST00000597965 ZBTB18Q99592 522 aa14.83□□□□□ -0.04
PNKP-210ENST00000597965 RASD1Q9Y272 281 aa14.83□□□□□ -0.04
PNKP-210ENST00000597965 PCDHB14Q9Y5E9 798 aa14.83□□□□□ -0.04
PNKP-210ENST00000597965 ARPC4-TTLL3A0A0A6YYG9 625 aa14.82□□□□□ -0.04
PNKP-210ENST00000597965 IGHV1-18A0A0C4DH31 117 aa14.82□□□□□ -0.04
PNKP-210ENST00000597965 ZC3H12DA2A288 527 aaKnown RBP14.82□□□□□ -0.04
PNKP-210ENST00000597965 KLF11O14901 512 aa14.82□□□□□ -0.04
PNKP-210ENST00000597965 LY6HO94772 140 aa14.82□□□□□ -0.04
PNKP-210ENST00000597965 TGFAP01135 160 aa14.82□□□□□ -0.04
PNKP-210ENST00000597965 ZNF23P17027 643 aa14.82□□□□□ -0.04
PNKP-210ENST00000597965 PLAURQ03405 335 aa14.82□□□□□ -0.04
PNKP-210ENST00000597965 TBRG1Q3YBR2 411 aa14.82□□□□□ -0.04
PNKP-210ENST00000597965 LIN52Q52LA3 116 aa14.82□□□□□ -0.04
PNKP-210ENST00000597965 OGFOD2Q6N063 350 aa14.82□□□□□ -0.04
PNKP-210ENST00000597965 ZNF621Q6ZSS3 439 aa14.82□□□□□ -0.04
PNKP-210ENST00000597965 SPATA19Q7Z5L4 167 aa14.82□□□□□ -0.04
PNKP-210ENST00000597965 HMGN2P46Q86SG4 172 aa14.82□□□□□ -0.04
PNKP-210ENST00000597965 ANKFN1Q8N957 763 aa14.82□□□□□ -0.04
PNKP-210ENST00000597965 ZIC4Q8N9L1 334 aa14.82□□□□□ -0.04
PNKP-210ENST00000597965 OR1K1Q8NGR3 316 aa14.82□□□□□ -0.04
PNKP-210ENST00000597965 C3orf49Q96BT1 292 aa14.82□□□□□ -0.04
PNKP-210ENST00000597965 ANKRD27Q96NW4 1050 aa14.82□□□□□ -0.04
PNKP-210ENST00000597965 FOXN4Q96NZ1 517 aa14.82□□□□□ -0.04
PNKP-210ENST00000597965 ZNF385AQ96PM9 386 aaKnown RBP14.82□□□□□ -0.04
PNKP-210ENST00000597965 PRR14Q9BWN1 585 aa14.82□□□□□ -0.04
PNKP-210ENST00000597965 ADPRHL2Q9NX46 363 aa14.82□□□□□ -0.04
PNKP-210ENST00000597965 THUMPD1Q9NXG2 353 aaKnown RBP14.82□□□□□ -0.04
PNKP-210ENST00000597965 CRNNQ9UBG3 495 aaPredicted RBP14.82□□□□□ -0.04
PNKP-210ENST00000597965 P2RX2Q9UBL9 471 aa14.82□□□□□ -0.04
PNKP-210ENST00000597965 ZNF232Q9UNY5 417 aa14.82□□□□□ -0.04
PNKP-210ENST00000597965 PRAMEF27A3QJZ7 478 aa14.81□□□□□ -0.04
PNKP-210ENST00000597965 CDHR4A6H8M9 788 aa14.81□□□□□ -0.04
PNKP-210ENST00000597965 TMEM247A6NEH6 219 aa14.81□□□□□ -0.04
PNKP-210ENST00000597965 TM9SF1O15321 606 aa14.81□□□□□ -0.04
PNKP-210ENST00000597965 ITM2AO43736 263 aa14.81□□□□□ -0.04
PNKP-210ENST00000597965 PGRP06401 933 aa14.81□□□□□ -0.04
PNKP-210ENST00000597965 CHRM4P08173 479 aa14.81□□□□□ -0.04
PNKP-210ENST00000597965 OR4A8P0C604 315 aa14.81□□□□□ -0.04
PNKP-210ENST00000597965 GTF2E2P29084 291 aaKnown RBP14.81□□□□□ -0.04
PNKP-210ENST00000597965 SLC1A6P48664 564 aa14.81□□□□□ -0.04
PNKP-210ENST00000597965 IDH3GP51553 393 aaPredicted RBP14.81□□□□□ -0.04
PNKP-210ENST00000597965 LARS2Q15031 903 aaKnown RBP14.81□□□□□ -0.04
PNKP-210ENST00000597965 PRAMEF8Q5VWM4 474 aa14.81□□□□□ -0.04
PNKP-210ENST00000597965 PRAMEF7Q5VXH5 474 aa14.81□□□□□ -0.04
PNKP-210ENST00000597965 ANKRD16Q6P6B7 361 aa14.81□□□□□ -0.04
PNKP-210ENST00000597965 ARIH2OSQ8N7S6 290 aa14.81□□□□□ -0.04
PNKP-210ENST00000597965 GLB1L3Q8NCI6 653 aaPredicted RBP14.81□□□□□ -0.04
PNKP-210ENST00000597965 NUP37Q8NFH4 326 aa14.81□□□□□ -0.04
PNKP-210ENST00000597965 NEU4Q8WWR8 484 aaPredicted RBP14.81□□□□□ -0.04
PNKP-210ENST00000597965 OR52E6Q96RD3 313 aa14.81□□□□□ -0.04
PNKP-210ENST00000597965 LINC00470Q9BZP3 86 aa14.81□□□□□ -0.04
PNKP-210ENST00000597965 PLK3Q9H4B4 646 aa14.81□□□□□ -0.04
PNKP-210ENST00000597965 MEAF6Q9HAF1 191 aa14.81□□□□□ -0.04
PNKP-210ENST00000597965 SSU72Q9NP77 194 aaKnown RBP14.81□□□□□ -0.04
PNKP-210ENST00000597965 NBEAL1Q6ZS30 2694 aa14.8□□□□□ -0.04
PNKP-210ENST00000597965 WDR91A4D1P6 747 aa14.8□□□□□ -0.04
PNKP-210ENST00000597965 TFPTP0C1Z6 253 aa14.8□□□□□ -0.04
PNKP-210ENST00000597965 NCF2P19878 526 aaPredicted RBP14.8□□□□□ -0.04
PNKP-210ENST00000597965 PCMT1P22061 227 aa14.8□□□□□ -0.04
PNKP-210ENST00000597965 CHN2P52757 468 aa14.8□□□□□ -0.04
PNKP-210ENST00000597965 CRISP3P54108 245 aa14.8□□□□□ -0.04
PNKP-210ENST00000597965 NAAAQ02083 359 aa14.8□□□□□ -0.04
PNKP-210ENST00000597965 ADIPOQQ15848 244 aa14.8□□□□□ -0.04
PNKP-210ENST00000597965 RNF220Q5VTB9 566 aa14.8□□□□□ -0.04
PNKP-210ENST00000597965 CREB3L2Q70SY1 520 aa14.8□□□□□ -0.04
PNKP-210ENST00000597965 CCDC36Q8IYA8 594 aa14.8□□□□□ -0.04
PNKP-210ENST00000597965 CADM2Q8N3J6 435 aa14.8□□□□□ -0.04
PNKP-210ENST00000597965 RFLNBQ8N5W9 214 aa14.8□□□□□ -0.04
PNKP-210ENST00000597965 IL17RDQ8NFM7 739 aa14.8□□□□□ -0.04
PNKP-210ENST00000597965 OR52P1PQ8NH57 321 aa14.8□□□□□ -0.04
PNKP-210ENST00000597965 HPS1Q92902 700 aa14.8□□□□□ -0.04
PNKP-210ENST00000597965 NUF2Q9BZD4 464 aa14.8□□□□□ -0.04
PNKP-210ENST00000597965 ZNF442Q9H7R0 627 aa14.8□□□□□ -0.04
PNKP-210ENST00000597965 HAO1Q9UJM8 370 aa14.8□□□□□ -0.04
PNKP-210ENST00000597965 IGHV4-61A0A0C4DH41 118 aa14.79□□□□□ -0.04
PNKP-210ENST00000597965 RFXANKO14593 260 aa14.79□□□□□ -0.04
PNKP-210ENST00000597965 SHOX2O60902 331 aaPredicted RBP14.79□□□□□ -0.04
PNKP-210ENST00000597965 LGI1O95970 557 aa14.79□□□□□ -0.04
PNKP-210ENST00000597965 IL6P05231 212 aa14.79□□□□□ -0.04
PNKP-210ENST00000597965 GIFP27352 417 aa14.79□□□□□ -0.04
PNKP-210ENST00000597965 C1orf140Q5VVS0 124 aa14.79□□□□□ -0.04
PNKP-210ENST00000597965 NIPAL3Q6P499 406 aa14.79□□□□□ -0.04
PNKP-210ENST00000597965 STK35Q8TDR2 534 aa14.79□□□□□ -0.04
PNKP-210ENST00000597965 BCL2L2Q92843 193 aaPredicted RBP14.79□□□□□ -0.04
PNKP-210ENST00000597965 ALKBH3Q96Q83 286 aaPredicted RBP14.79□□□□□ -0.04
PNKP-210ENST00000597965 BPESC1Q9GZL8 116 aa14.79□□□□□ -0.04
PNKP-210ENST00000597965 RLIMQ9NVW2 624 aa14.79□□□□□ -0.04
PNKP-210ENST00000597965 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.79□□□□□ -0.04
PNKP-210ENST00000597965 RCE1Q9Y256 329 aa14.79□□□□□ -0.04
PNKP-210ENST00000597965 IFT52Q9Y366 437 aa14.79□□□□□ -0.04
PNKP-210ENST00000597965 SVEP1Q4LDE5 3571 aa14.79□□□□□ -0.04
PNKP-210ENST00000597965 SLC35F4A4IF30 521 aa14.78□□□□□ -0.04
PNKP-210ENST00000597965 AHSA1O95433 338 aa14.78□□□□□ -0.04
PNKP-210ENST00000597965 IGKV3-15P01624 115 aa14.78□□□□□ -0.04
PNKP-210ENST00000597965 IGLV1-44P01699 117 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms