RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, human

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA4-208	ENST00000597023	SF3B5	Q9BWJ5	86 aa	Known RBP	13.66	□□□□□ -0.22
PPFIA4-208	ENST00000597023	SLCO5A1	Q9H2Y9	848 aa		13.66	□□□□□ -0.22
PPFIA4-208	ENST00000597023	NPHS2	Q9NP85	383 aa		13.66	□□□□□ -0.22
PPFIA4-208	ENST00000597023	SLC17A5	Q9NRA2	495 aa		13.66	□□□□□ -0.22
PPFIA4-208	ENST00000597023		A0A1B0GWA3	101 aa		13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	EVPLL	A8MZ36	301 aa		13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	FTCDNL1	E5RQL4	147 aa		13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	SASH3	O75995	380 aa		13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	KRT33A	O76009	404 aa		13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	PNMT	P11086	282 aa		13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	H2AFX	P16104	143 aa	Predicted RBP	13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	GPX2	P18283	190 aa		13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	MPG	P29372	298 aa		13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	PRKAR1B	P31321	381 aa		13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	ACVR1B	P36896	505 aa		13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	VEZF1	Q14119	521 aa		13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	ADRM1	Q16186	407 aa		13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	HIKESHI	Q53FT3	197 aa		13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	RUNDC3A	Q59EK9	446 aa		13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	NIPAL3	Q6P499	406 aa		13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	KLHL17	Q6TDP4	642 aa		13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	B3GLCT	Q6Y288	498 aa		13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	RETREG3	Q86VR2	466 aa		13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	EPHX4	Q8IUS5	362 aa		13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	HTRA1	Q92743	480 aa		13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	TAAR8	Q969N4	342 aa		13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	AMBRA1	Q9C0C7	1298 aa		13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	ALG2	Q9H553	416 aa		13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023	FLNA	P21333	2647 aa	Known RBP	13.65	□□□□□ -0.22
PPFIA4-208	ENST00000597023		A0A0G2JND7	137 aa		13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	RNF223	E7ERA6	249 aa		13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	TMCC2	O75069	709 aa		13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	UPK3A	O75631	287 aa		13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	LGI1	O95970	557 aa		13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	IGHV4-39	P01824	125 aa		13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	SLC6A2	P23975	617 aa		13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	PTAFR	P25105	342 aa		13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	PCSK6	P29122	969 aa		13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	DMTN	Q08495	405 aa		13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	METTL21C	Q5VZV1	264 aa		13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	DHRS4L2	Q6PKH6	230 aa		13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	LINGO2	Q7L985	606 aa		13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	KRT73	Q86Y46	540 aa		13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	SMYD1	Q8NB12	490 aa		13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	MFSD8	Q8NHS3	518 aa		13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	RADIL	Q96JH8	1075 aa		13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	ALKBH3	Q96Q83	286 aa	Predicted RBP	13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	SPATA5L1	Q9BVQ7	753 aa		13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	ZNF385D	Q9H6B1	395 aa		13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	EVA1A	Q9H8M9	152 aa		13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	LEF1	Q9UJU2	399 aa	Predicted RBP	13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	B3GALT5	Q9Y2C3	310 aa		13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	NDUFAF1	Q9Y375	327 aa		13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	NF1	P21359	2839 aa		13.64	□□□□□ -0.23
PPFIA4-208	ENST00000597023	IGKV1D-42	A0A075B6H8	117 aa		13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023	TPST2	O60704	377 aa		13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023	EDF1	O60869	148 aa	Known RBP	13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023	OPN1SW	P03999	348 aa		13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023	VIM	P08670	466 aa	Known RBP	13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023	GTF2E2	P29084	291 aa	Known RBP	13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023	CLDN17	P56750	224 aa		13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023	MTPN	P58546	118 aa		13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023	IL1RL1	Q01638	556 aa		13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023	TGFBR3	Q03167	851 aa		13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023	OR1Q1	Q15612	314 aa		13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023	ALG10B	Q5I7T1	473 aa		13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023	C1QTNF12	Q5T7M4	302 aa		13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023	DHDDS	Q86SQ9	333 aa		13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023	PTOV1	Q86YD1	416 aa		13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023	POMGNT2	Q8NAT1	580 aa		13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023	TSPEAR	Q8WU66	669 aa		13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023	ZNF607	Q96SK3	696 aa		13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023	TMEM38A	Q9H6F2	299 aa		13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023	MGAT4B	Q9UQ53	548 aa		13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023	RASD1	Q9Y272	281 aa		13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023	AMDHD2	Q9Y303	409 aa		13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023	GMEB1	Q9Y692	573 aa		13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023	ATP23	Q9Y6H3	246 aa		13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023	CAD	P27708	2225 aa		13.63	□□□□□ -0.23
PPFIA4-208	ENST00000597023		A0A096LPE4	126 aa		13.62	□□□□□ -0.23
PPFIA4-208	ENST00000597023		A0A1W2PPZ6	126 aa		13.62	□□□□□ -0.23
PPFIA4-208	ENST00000597023	FAM171A2	A8MVW0	826 aa		13.62	□□□□□ -0.23
PPFIA4-208	ENST00000597023		M0R082	166 aa		13.62	□□□□□ -0.23
PPFIA4-208	ENST00000597023	ANGPT2	O15123	496 aa		13.62	□□□□□ -0.23
PPFIA4-208	ENST00000597023	VAMP5	O95183	116 aa		13.62	□□□□□ -0.23
PPFIA4-208	ENST00000597023	ZNF43	P17038	809 aa		13.62	□□□□□ -0.23
PPFIA4-208	ENST00000597023	GRPR	P30550	384 aa		13.62	□□□□□ -0.23
PPFIA4-208	ENST00000597023	TTK	P33981	857 aa		13.62	□□□□□ -0.23
PPFIA4-208	ENST00000597023	FABP6	P51161	128 aa		13.62	□□□□□ -0.23
PPFIA4-208	ENST00000597023	RGS8	P57771	180 aa	Predicted RBP	13.62	□□□□□ -0.23
PPFIA4-208	ENST00000597023	PRPS1	P60891	318 aa		13.62	□□□□□ -0.23
PPFIA4-208	ENST00000597023	NCALD	P61601	193 aa		13.62	□□□□□ -0.23
PPFIA4-208	ENST00000597023	TUBA1B	P68363	451 aa		13.62	□□□□□ -0.23
PPFIA4-208	ENST00000597023	TUBA4A	P68366	448 aa		13.62	□□□□□ -0.23
PPFIA4-208	ENST00000597023	AGAP6	Q5VW22	663 aa		13.62	□□□□□ -0.23
PPFIA4-208	ENST00000597023	KLHL24	Q6TFL4	600 aa		13.62	□□□□□ -0.23
PPFIA4-208	ENST00000597023	C6orf89	Q6UWU4	347 aa		13.62	□□□□□ -0.23
PPFIA4-208	ENST00000597023	TUBA1A	Q71U36	451 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms