RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 PERPQ96FX8 193 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 C18orf12Q96KH6 178 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 ZNF385AQ96PM9 386 aaKnown RBP9.25□□□□□ -0.93
CCDC9-203ENST00000596938 PRR14Q9BWN1 585 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 TMEM120AQ9BXJ8 343 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 GRIP2Q9C0E4 1043 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 SLCO5A1Q9H2Y9 848 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 TMEM27Q9HBJ8 222 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 TESQ9UGI8 421 aaKnown RBP9.25□□□□□ -0.93
CCDC9-203ENST00000596938 SLC13A4Q9UKG4 626 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 MGAT4BQ9UQ53 548 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 ANGPT4Q9Y264 503 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 B3GALT5Q9Y2C3 310 aa9.25□□□□□ -0.93
CCDC9-203ENST00000596938 TRAV36DV7A0A075B6V5 113 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 A0A087WUJ7 227 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 SHISA9B4DS77 424 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 FBP2O00757 339 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 TPST2O60704 377 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 LGI1O95970 557 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 PAX7P23759 505 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 AQP1P29972 269 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 RPS5P46782 204 aaKnown RBP9.24□□□□□ -0.93
CCDC9-203ENST00000596938 PTH2RP49190 550 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 GZMMP51124 257 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 ARFIP2P53365 341 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 MTPNP58546 118 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 NFYCQ13952 458 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 CYLC2Q14093 348 aaPredicted RBP9.24□□□□□ -0.93
CCDC9-203ENST00000596938 MFSD13AQ14CX5 517 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 OR1Q1Q15612 314 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 DUSP7Q16829 419 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 CYP51A1Q16850 503 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 COQ5Q5HYK3 327 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 SWT1Q5T5J6 900 aaKnown RBP9.24□□□□□ -0.93
CCDC9-203ENST00000596938 FAM69AQ5T7M9 428 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 KLHL17Q6TDP4 642 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 TMEM108Q6UXF1 575 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 H1FNTQ75WM6 255 aaPredicted RBP9.24□□□□□ -0.93
CCDC9-203ENST00000596938 ABHD12BQ7Z5M8 362 aaPredicted RBP9.24□□□□□ -0.93
CCDC9-203ENST00000596938 YTHDF3Q7Z739 585 aaKnown RBP9.24□□□□□ -0.93
CCDC9-203ENST00000596938 PATL1Q86TB9 770 aaKnown RBP9.24□□□□□ -0.93
CCDC9-203ENST00000596938 BIVMQ86UB2 503 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 LSRQ86X29 649 aaPredicted RBP9.24□□□□□ -0.93
CCDC9-203ENST00000596938 ANKK1Q8NFD2 765 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 OR52N5Q8NH56 324 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 TAAR8Q969N4 342 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 SLC25A36Q96CQ1 311 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 OXGR1Q96P68 337 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 SH3GL1Q99961 368 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 BDH2Q9BUT1 245 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 CCDC134Q9H6E4 229 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 SLC17A5Q9NRA2 495 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 CISD1Q9NZ45 108 aaKnown RBP9.24□□□□□ -0.93
CCDC9-203ENST00000596938 NPAP1Q9NZP6 1156 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 SELENONQ9NZV5 590 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 LAMP3Q9UQV4 416 aa9.24□□□□□ -0.93
CCDC9-203ENST00000596938 MED13LQ71F56 2210 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 IGKV1D-42A0A075B6H8 117 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 A0A0B4J2E0 115 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 A0A1B0GX12 115 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 ABCD4O14678 606 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 AIM2O14862 343 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 SOD3P08294 240 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 VIMP08670 466 aaKnown RBP9.23□□□□□ -0.93
CCDC9-203ENST00000596938 INHBBP09529 407 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 ZNF43P17038 809 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 CD40P25942 277 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 RGS8P57771 180 aaPredicted RBP9.23□□□□□ -0.93
CCDC9-203ENST00000596938 PRPS1P60891 318 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 NCALDP61601 193 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 RPS4XP62701 263 aaKnown RBP9.23□□□□□ -0.93
CCDC9-203ENST00000596938 SELPLGQ14242 412 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 PGGHGQ32M88 737 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 INTS11Q5TA45 600 aaKnown RBP9.23□□□□□ -0.93
CCDC9-203ENST00000596938 NANOGP8Q6NSW7 305 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 ZNF613Q6PF04 617 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 LINC00114Q6XXX2 140 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 CCDC80Q76M96 950 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 RANBP3LQ86VV4 465 aaPredicted RBP9.23□□□□□ -0.93
CCDC9-203ENST00000596938 KDM8Q8N371 416 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 ADPRHL1Q8NDY3 354 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 KBTBD8Q8NFY9 601 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 GPR32P1Q8NGA4 272 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 NEUROG1Q92886 237 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 TRMT61AQ96FX7 289 aaKnown RBP9.23□□□□□ -0.93
CCDC9-203ENST00000596938 SLC41A3Q96GZ6 507 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 ZNF317Q96PQ6 595 aaPredicted RBP9.23□□□□□ -0.93
CCDC9-203ENST00000596938 EPYCQ99645 322 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 ARHGDIGQ99819 225 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 WFDC6Q9BQY6 131 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 TMEM43Q9BTV4 400 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 LINC00470Q9BZP3 86 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 NANOGQ9H9S0 305 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 OBP2BQ9NPH6 170 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 SAR1AQ9NR31 198 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 FGFR1OP2Q9NVK5 253 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 KLHL14Q9P2G3 628 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 RCE1Q9Y256 329 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 AMDHD2Q9Y303 409 aa9.23□□□□□ -0.93
CCDC9-203ENST00000596938 CORINQ9Y5Q5 1042 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms