RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 NDUFS7O75251 213 aa11.44□□□□□ -0.58
LIG1-212ENST00000596549 LY6G6DO95868 133 aa11.44□□□□□ -0.58
LIG1-212ENST00000596549 CD8AP01732 235 aa11.44□□□□□ -0.58
LIG1-212ENST00000596549 HEXAP06865 529 aa11.44□□□□□ -0.58
LIG1-212ENST00000596549 PTNP21246 168 aa11.44□□□□□ -0.58
LIG1-212ENST00000596549 CD40P25942 277 aa11.44□□□□□ -0.58
LIG1-212ENST00000596549 PCBP3P57721 371 aaKnown RBP11.44□□□□□ -0.58
LIG1-212ENST00000596549 LTBQ06643 244 aa11.44□□□□□ -0.58
LIG1-212ENST00000596549 DMTNQ08495 405 aa11.44□□□□□ -0.58
LIG1-212ENST00000596549 KRTAP21-3Q3LHN1 58 aa11.44□□□□□ -0.58
LIG1-212ENST00000596549 CGB2Q6NT52 195 aa11.44□□□□□ -0.58
LIG1-212ENST00000596549 CLEC9AQ6UXN8 241 aa11.44□□□□□ -0.58
LIG1-212ENST00000596549 CREB3L2Q70SY1 520 aa11.44□□□□□ -0.58
LIG1-212ENST00000596549 SSX8Q7RTT4 187 aa11.44□□□□□ -0.58
LIG1-212ENST00000596549 AAED1Q7RTV5 226 aa11.44□□□□□ -0.58
LIG1-212ENST00000596549 PIAS4Q8N2W9 510 aaPredicted RBP11.44□□□□□ -0.58
LIG1-212ENST00000596549 KDM8Q8N371 416 aa11.44□□□□□ -0.58
LIG1-212ENST00000596549 DPP10Q8N608 796 aa11.44□□□□□ -0.58
LIG1-212ENST00000596549 HIPK4Q8NE63 616 aa11.44□□□□□ -0.58
LIG1-212ENST00000596549 MFSD8Q8NHS3 518 aa11.44□□□□□ -0.58
LIG1-212ENST00000596549 ANKRD27Q96NW4 1050 aa11.44□□□□□ -0.58
LIG1-212ENST00000596549 CGREF1Q99674 301 aa11.44□□□□□ -0.58
LIG1-212ENST00000596549 NELFAQ9H3P2 528 aa11.44□□□□□ -0.58
LIG1-212ENST00000596549 PARPBPQ9NWS1 579 aa11.44□□□□□ -0.58
LIG1-212ENST00000596549 CISD1Q9NZ45 108 aaKnown RBP11.44□□□□□ -0.58
LIG1-212ENST00000596549 UPB1Q9UBR1 384 aa11.44□□□□□ -0.58
LIG1-212ENST00000596549 CORO2BQ9UQ03 480 aa11.44□□□□□ -0.58
LIG1-212ENST00000596549 A0A0B4J2E0 115 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 A0A0G2JND7 137 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 A0A1B0GX12 115 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 ELOA3DA6NLF2 546 aaPredicted RBP11.43□□□□□ -0.58
LIG1-212ENST00000596549 E7EQL1 145 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 M0R1B8 84 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 SMAD7O15105 426 aaKnown RBP11.43□□□□□ -0.58
LIG1-212ENST00000596549 MFN2O95140 757 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 OPN1SWP03999 348 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 MPGP29372 298 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 RGS8P57771 180 aaPredicted RBP11.43□□□□□ -0.58
LIG1-212ENST00000596549 ELOA3BQ3SY89 546 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 HIKESHIQ53FT3 197 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 ALG10BQ5I7T1 473 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 TMEM225Q6GV28 225 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 OR7E24Q6IFN5 339 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 C11orf71Q6IPW1 123 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 TMEM108Q6UXF1 575 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 NET1Q7Z628 596 aaPredicted RBP11.43□□□□□ -0.58
LIG1-212ENST00000596549 KRT73Q86Y46 540 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 ELOA3Q8NG57 546 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 GPR32P1Q8NGA4 272 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 TAAR8Q969N4 342 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 SLC25A36Q96CQ1 311 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 SIKE1Q9BRV8 207 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 BDH2Q9BUT1 245 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 SPATA5L1Q9BVQ7 753 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 C1QTNF6Q9BXI9 259 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 TMEM120AQ9BXJ8 343 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 RABEP2Q9H5N1 569 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 PIF1Q9H611 641 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 KLHL14Q9P2G3 628 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 GDF2Q9UK05 429 aaPredicted RBP11.43□□□□□ -0.58
LIG1-212ENST00000596549 ANGPT4Q9Y264 503 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 RASD1Q9Y272 281 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 AMDHD2Q9Y303 409 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 NDUFAF1Q9Y375 327 aa11.43□□□□□ -0.58
LIG1-212ENST00000596549 HEATR1Q9H583 2144 aaKnown RBP11.42□□□□□ -0.58
LIG1-212ENST00000596549 PLCE1Q9P212 2302 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 EVPLLA8MZ36 301 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 M0R082 166 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 M0R3H8 397 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 FBP2O00757 339 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 ANGPT2O15123 496 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 UPK3AO75631 287 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 ZNF432O94892 652 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 VAMP5O95183 116 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 LGI1O95970 557 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 IGHV4-39P01824 125 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 CBLP22681 906 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 SLC6A2P23975 617 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 PTAFRP25105 342 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 CRYBA2P53672 197 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 NCALDP61601 193 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 KRTAP1-1Q07627 177 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 NFYCQ13952 458 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 NPTX1Q15818 432 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 FAM69AQ5T7M9 428 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 FAM91A1Q658Y4 838 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 NIPAL3Q6P499 406 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 DNM1P46Q6ZS02 220 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 TSPYL5Q86VY4 417 aaPredicted RBP11.42□□□□□ -0.58
LIG1-212ENST00000596549 ARMC8Q8IUR7 673 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 POMGNT2Q8NAT1 580 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 SMYD1Q8NB12 490 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 OR4D11Q8NGI4 311 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 OR1K1Q8NGR3 316 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 ZNF417Q8TAU3 575 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 SLC38A4Q969I6 547 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 BOD1Q96IK1 185 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 ZNF587Q96SQ5 575 aaPredicted RBP11.42□□□□□ -0.58
LIG1-212ENST00000596549 ARHGDIGQ99819 225 aa11.42□□□□□ -0.58
LIG1-212ENST00000596549 KAT8Q9H7Z6 458 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms