RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 OLIG3Q7RTU3 272 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 GTF2IRD2Q86UP8 949 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 PM20D2Q8IYS1 436 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 ZNF619Q8N2I2 560 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 AQP11Q8NBQ7 271 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 OR13F1Q8NGS4 319 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 OR52P1PQ8NH57 321 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 IPCEF1Q8WWN9 437 aaPredicted RBP11.53□□□□□ -0.56
SCAF1-202ENST00000595242 DIO2Q92813 273 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 JSRP1Q96MG2 331 aaPredicted RBP11.53□□□□□ -0.56
SCAF1-202ENST00000595242 PELOQ9BRX2 385 aaKnown RBP11.53□□□□□ -0.56
SCAF1-202ENST00000595242 C19orf24Q9BVV8 132 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 PRDM14Q9GZV8 571 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 CXorf21Q9HAI6 301 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 ADAP2Q9NPF8 381 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 PAK1IP1Q9NWT1 392 aaPredicted RBP11.53□□□□□ -0.56
SCAF1-202ENST00000595242 REV1Q9UBZ9 1251 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 CAMK2AQ9UQM7 478 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 ZNF443Q9Y2A4 671 aaPredicted RBP11.53□□□□□ -0.56
SCAF1-202ENST00000595242 WDR45Q9Y484 360 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 CLCA3PQ9Y6N3 262 aa11.53□□□□□ -0.56
SCAF1-202ENST00000595242 AGAP5A6NIR3 686 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 LRRC3CA6NJW4 275 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 TTC36A6NLP5 189 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 TGFBR3LH3BV60 316 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 CD5LO43866 347 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 GASTP01350 101 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 FAM157CP0CG43 387 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 OSMP13725 252 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 PCMT1P22061 227 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 PAX7P23759 505 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 DCKP27707 260 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 CRISP1P54107 249 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 UGT2B15P54855 530 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 ATP5J2P56134 94 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 EEF1A1P68104 462 aaKnown RBP11.52□□□□□ -0.57
SCAF1-202ENST00000595242 COX10Q12887 443 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 PMS2P3Q13401 168 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 ELAVL1Q15717 326 aaKnown RBP11.52□□□□□ -0.57
SCAF1-202ENST00000595242 FGD3Q5JSP0 725 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 WIPI1Q5MNZ9 446 aaPredicted RBP11.52□□□□□ -0.57
SCAF1-202ENST00000595242 DCST2Q5T1A1 773 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 PRAMEF20Q5VT98 475 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 PGBD2Q6P3X8 592 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 PLEKHM3Q6ZWE6 761 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 VRK2Q86Y07 508 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 GALNT12Q8IXK2 581 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 PEX5LQ8IYB4 626 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 C9orf106Q8NAJ2 232 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 MORN4Q8NDC4 146 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 C7orf57Q8NEG2 295 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 TOR1AIP2Q8NFQ8 470 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 RHOXF1Q8NHV9 184 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 SLC7A13Q8TCU3 470 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 SLC9A6Q92581 669 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 MUL1Q969V5 352 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 NTNG2Q96CW9 530 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 WFIKKN1Q96NZ8 548 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 NODALQ96S42 347 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 CALHM2Q9HA72 323 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 SH2D2AQ9NP31 389 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 PRTFDC1Q9NRG1 225 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 FKBP14Q9NWM8 211 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 KLHL28Q9NXS3 571 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 SCN3BQ9NY72 215 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 ZNF226Q9NYT6 803 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 RHCGQ9UBD6 479 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 EXPH5Q8NEV8 1989 aa11.52□□□□□ -0.57
SCAF1-202ENST00000595242 MPZL2O60487 215 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 FCMRO60667 390 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 STX11O75558 287 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 DBIP07108 87 aaKnown RBP11.51□□□□□ -0.57
SCAF1-202ENST00000595242 EEF1B2P24534 225 aaKnown RBP11.51□□□□□ -0.57
SCAF1-202ENST00000595242 GDF1P27539 372 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 KRT20P35900 424 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 STT3AP46977 705 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 POU6F2P78424 691 aaPredicted RBP11.51□□□□□ -0.57
SCAF1-202ENST00000595242 MVKQ03426 396 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 PIN1Q13526 163 aaPredicted RBP11.51□□□□□ -0.57
SCAF1-202ENST00000595242 LARS2Q15031 903 aaKnown RBP11.51□□□□□ -0.57
SCAF1-202ENST00000595242 TRAM2Q15035 370 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 SLX4IPQ5VYV7 408 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 C1orf94Q6P1W5 598 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 ZNF836Q6ZNA1 936 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 DGAT2L6Q6ZPD8 337 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 ZNF321PQ8N8H1 164 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 COX18Q8N8Q8 333 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 ZNF441Q8N8Z8 693 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 BPIFB6Q8NFQ5 453 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 OR5L2Q8NGL0 311 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 OR8K3Q8NH51 312 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 PAQR8Q8TEZ7 354 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 ZFAND2BQ8WV99 257 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 TMEM171Q8WVE6 324 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 IGFBPL1Q8WX77 278 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 DAZLQ92904 295 aaKnown RBP11.51□□□□□ -0.57
SCAF1-202ENST00000595242 HS3ST6Q96QI5 342 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 PIGQQ9BRB3 760 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 FNDC11Q9BVV2 318 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 QRSL1Q9H0R6 528 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms