RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 SH3GL1Q99961 368 aa13.32□□□□□ -0.28
TRIM28-205ENST00000595028 WFDC6Q9BQY6 131 aa13.32□□□□□ -0.28
TRIM28-205ENST00000595028 PRR14Q9BWN1 585 aa13.32□□□□□ -0.28
TRIM28-205ENST00000595028 PIF1Q9H611 641 aa13.32□□□□□ -0.28
TRIM28-205ENST00000595028 NGBQ9NPG2 151 aa13.32□□□□□ -0.28
TRIM28-205ENST00000595028 BEX4Q9NWD9 120 aaPredicted RBP13.32□□□□□ -0.28
TRIM28-205ENST00000595028 PARPBPQ9NWS1 579 aa13.32□□□□□ -0.28
TRIM28-205ENST00000595028 ASB6Q9NWX5 421 aa13.32□□□□□ -0.28
TRIM28-205ENST00000595028 M0QX08 132 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 M0R3H8 397 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 PDLIM1O00151 329 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 TPST2O60704 377 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 RAD51DO75771 328 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 LGI1O95970 557 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 NPPAP01160 153 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 ITGA5P08648 1049 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 GTF2E2P29084 291 aaKnown RBP13.31□□□□□ -0.28
TRIM28-205ENST00000595028 RPS5P46782 204 aaKnown RBP13.31□□□□□ -0.28
TRIM28-205ENST00000595028 FAPQ12884 760 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 PPA1Q15181 289 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 OR1Q1Q15612 314 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 NRF1Q16656 503 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 DUSP7Q16829 419 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 VMACQ2NL98 169 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 TIMM23BQ5SRD1 257 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 SSX8Q7RTT4 187 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 P2RY8Q86VZ1 359 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 PRIMA1Q86XR5 153 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 ZIC4Q8N9L1 334 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 GPR32P1Q8NGA4 272 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 SLC38A4Q969I6 547 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 KTI12Q96EK9 354 aaPredicted RBP13.31□□□□□ -0.28
TRIM28-205ENST00000595028 SLC47A1Q96FL8 570 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 ZNF385AQ96PM9 386 aaKnown RBP13.31□□□□□ -0.28
TRIM28-205ENST00000595028 SMR3AQ99954 134 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 ESRP2Q9H6T0 727 aaKnown RBP13.31□□□□□ -0.28
TRIM28-205ENST00000595028 TMEM27Q9HBJ8 222 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 TAS2R16Q9NYV7 291 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 SELENONQ9NZV5 590 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 ARMCX1Q9P291 453 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 RNF115Q9Y4L5 304 aa13.31□□□□□ -0.28
TRIM28-205ENST00000595028 LOC100653049A0A140TA62 436 aa13.3□□□□□ -0.28
TRIM28-205ENST00000595028 OR5H1A6NKK0 313 aa13.3□□□□□ -0.28
TRIM28-205ENST00000595028 FMO6PO60774 539 aa13.3□□□□□ -0.28
TRIM28-205ENST00000595028 KRT34O76011 436 aa13.3□□□□□ -0.28
TRIM28-205ENST00000595028 PLAUP00749 431 aa13.3□□□□□ -0.28
TRIM28-205ENST00000595028 C8BP07358 591 aa13.3□□□□□ -0.28
TRIM28-205ENST00000595028 CD247P20963 164 aa13.3□□□□□ -0.28
TRIM28-205ENST00000595028 CRYBA2P53672 197 aa13.3□□□□□ -0.28
TRIM28-205ENST00000595028 FOXG1P55316 489 aaPredicted RBP13.3□□□□□ -0.28
TRIM28-205ENST00000595028 NCMAPQ5T1S8 102 aa13.3□□□□□ -0.28
TRIM28-205ENST00000595028 SWT1Q5T5J6 900 aaKnown RBP13.3□□□□□ -0.28
TRIM28-205ENST00000595028 FAM69AQ5T7M9 428 aa13.3□□□□□ -0.28
TRIM28-205ENST00000595028 TSPO2Q5TGU0 170 aa13.3□□□□□ -0.28
TRIM28-205ENST00000595028 TMEM225Q6GV28 225 aa13.3□□□□□ -0.28
TRIM28-205ENST00000595028 BIVMQ86UB2 503 aa13.3□□□□□ -0.28
TRIM28-205ENST00000595028 CALHM3Q86XJ0 350 aa13.3□□□□□ -0.28
TRIM28-205ENST00000595028 PCYOX1LQ8NBM8 494 aa13.3□□□□□ -0.28
TRIM28-205ENST00000595028 SPATA3Q8NHX4 192 aa13.3□□□□□ -0.28
TRIM28-205ENST00000595028 SLC25A36Q96CQ1 311 aa13.3□□□□□ -0.28
TRIM28-205ENST00000595028 CCL19Q99731 98 aa13.3□□□□□ -0.28
TRIM28-205ENST00000595028 PIP5K1AQ99755 562 aa13.3□□□□□ -0.28
TRIM28-205ENST00000595028 AMBRA1Q9C0C7 1298 aa13.3□□□□□ -0.28
TRIM28-205ENST00000595028 SLCO5A1Q9H2Y9 848 aa13.3□□□□□ -0.28
TRIM28-205ENST00000595028 SLC7A10Q9NS82 523 aa13.3□□□□□ -0.28
TRIM28-205ENST00000595028 RASD1Q9Y272 281 aa13.3□□□□□ -0.28
TRIM28-205ENST00000595028 TRAV36DV7A0A075B6V5 113 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 A0A087WUJ7 227 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 CIB4A0PJX0 185 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 CCT8L1PA6NM43 557 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 AIM2O14862 343 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 OR2T1O43869 369 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 GRPRP30550 384 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 BSPH1Q075Z2 132 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 NPTX1Q15818 432 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 ZNF613Q6PF04 617 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 CCDC80Q76M96 950 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 AAED1Q7RTV5 226 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 EPHX4Q8IUS5 362 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 P3H2Q8IVL5 708 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 C1orf162Q8NEQ5 155 aaPredicted RBP13.29□□□□□ -0.28
TRIM28-205ENST00000595028 OR6T1Q8NGN1 323 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 PIGTQ969N2 578 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 TAAR8Q969N4 342 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 MUCL1Q96DR8 90 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 MCHR1Q99705 422 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 ECSITQ9BQ95 431 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 NPAP1Q9NZP6 1156 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 B3GAT1Q9P2W7 334 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 UPB1Q9UBR1 384 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 SEC14L4Q9UDX3 406 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 ATRQ13535 2644 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 USF3Q68DE3 2245 aa13.29□□□□□ -0.28
TRIM28-205ENST00000595028 FAM220BPB1ANY3 271 aa13.28□□□□□ -0.28
TRIM28-205ENST00000595028 M0R082 166 aa13.28□□□□□ -0.28
TRIM28-205ENST00000595028 HS3ST1O14792 307 aa13.28□□□□□ -0.28
TRIM28-205ENST00000595028 CLOCKO15516 846 aa13.28□□□□□ -0.28
TRIM28-205ENST00000595028 CD3EP07766 207 aa13.28□□□□□ -0.28
TRIM28-205ENST00000595028 CDH12P55289 794 aa13.28□□□□□ -0.28
TRIM28-205ENST00000595028 ADAM8P78325 824 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms