RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 SPIN1Q9Y657 262 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-226ENST00000591534 GMEB1Q9Y692 573 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 ZANQ9Y493 2812 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 DSCAMO60469 2012 aa8.35□□□□□ -1.07
BRCA1-226ENST00000591534 FBN1P35555 2871 aaKnown RBP8.34□□□□□ -1.07
BRCA1-226ENST00000591534 DUXAA6NLW8 204 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 ZNF724A8MTY0 619 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 ANKRD28O15084 1053 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 GSC2O15499 205 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 ZNF264O43296 627 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 AK1P00568 194 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 IFNA14P01570 189 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 NQO1P15559 274 aaKnown RBP8.34□□□□□ -1.07
BRCA1-226ENST00000591534 PTAFRP25105 342 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 CCT3P49368 545 aaKnown RBP8.34□□□□□ -1.07
BRCA1-226ENST00000591534 CDH11P55287 796 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 NCALDP61601 193 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 UFM1P61960 85 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 RAB35Q15286 201 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 CD226Q15762 336 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 TIGD2Q4W5G0 525 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 DCST2Q5T1A1 773 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 CCNJQ5T5M9 372 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 C1QTNF12Q5T7M4 302 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 INTS11Q5TA45 600 aaKnown RBP8.34□□□□□ -1.07
BRCA1-226ENST00000591534 REP15Q6BDI9 236 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 C3orf33Q6P1S2 294 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 ZFP1Q6P2D0 407 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 NET1Q7Z628 596 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-226ENST00000591534 DHDDSQ86SQ9 333 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 DTX2Q86UW9 622 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 DEFB107AQ8IZN7 70 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 FBXL14Q8N1E6 418 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 KRTCAP2Q8N6L1 136 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 ZNF614Q8N883 585 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 MAPK1IP1LQ8NDC0 245 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 RBM15BQ8NDT2 890 aaKnown RBP8.34□□□□□ -1.07
BRCA1-226ENST00000591534 OR7A2PQ8NGA2 310 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 LILRB1Q8NHL6 650 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-226ENST00000591534 GPR119Q8TDV5 335 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 SLC25A43Q8WUT9 341 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-226ENST00000591534 OR5P2Q8WZ92 322 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 CDS1Q92903 461 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 LRGUKQ96M69 825 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 CCDC115Q96NT0 180 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 TRAF4Q9BUZ4 470 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-226ENST00000591534 SRXN1Q9BYN0 137 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 YY1AP1Q9H869 796 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 LPAR3Q9UBY5 353 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 ICAM5Q9UMF0 924 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 COL6A5A8TX70 2615 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 TLN2Q9Y4G6 2542 aa8.34□□□□□ -1.07
BRCA1-226ENST00000591534 ATRQ13535 2644 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 TRBV23-1A0A0A0MS06 115 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 CIB4A0PJX0 185 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 DPRXA6NFQ7 191 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 GPR171O14626 319 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 ABCD4O14678 606 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 SSX4O60224 188 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 CYTIPO60759 359 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 LYZL6O75951 148 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 IGHV4-39P01824 125 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 CSF3P09919 207 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 T-ENOLP0DO92 83 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 LAMP1P11279 417 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 UBL4AP11441 157 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 HSD17B1P14061 328 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 SLC25A16P16260 332 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 PRKCAP17252 672 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 CCR4P51679 360 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 PSME3P61289 254 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 CHRNB3Q05901 458 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 KRTAP1-1Q07627 177 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 RBBP4Q09028 425 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 QPRTQ15274 297 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 TSC22D1Q15714 1073 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 PGGHGQ32M88 737 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 SLC25A53Q5H9E4 307 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 LRIF1Q5T3J3 769 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 OR7E24Q6IFN5 339 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 UBE2J2Q8N2K1 259 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 KBTBD8Q8NFY9 601 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 SFXN5Q8TD22 340 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 OIT3Q8WWZ8 545 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 ST8SIA1Q92185 356 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 RCN3Q96D15 328 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 ASB9Q96DX5 294 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 OR5B2Q96R09 309 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 CGREF1Q99674 301 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 NPAS1Q99742 590 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 PSD2Q9BQI7 771 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 THTPAQ9BU02 230 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 THUMPD3Q9BV44 507 aaKnown RBP8.33□□□□□ -1.08
BRCA1-226ENST00000591534 BEX2Q9BXY8 128 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 AMBRA1Q9C0C7 1298 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 SIRT3Q9NTG7 399 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-226ENST00000591534 ADA2Q9NZK5 511 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-226ENST00000591534 MAGEL2Q9UJ55 1249 aa8.33□□□□□ -1.08
BRCA1-226ENST00000591534 RRP15Q9Y3B9 282 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms