RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 OR5V1Q9UGF6 321 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 MRPS7Q9Y2R9 242 aaKnown RBP5.77□□□□□ -1.49
SMAD4-212ENST00000591126 NME7Q9Y5B8 376 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 SRCAPQ6ZRS2 3230 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 SOCS2O14508 198 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 SCAF4O95104 1147 aaKnown RBP5.77□□□□□ -1.49
SMAD4-212ENST00000591126 DHFRP00374 187 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 IFNGR1P15260 489 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 RAB14P61106 215 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 PTGR1Q14914 329 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 RTP5Q14D33 572 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.77□□□□□ -1.49
SMAD4-212ENST00000591126 LRRC10Q5BKY1 277 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 MRPL2Q5T653 305 aaKnown RBP5.77□□□□□ -1.49
SMAD4-212ENST00000591126 OR52H1Q8NGJ2 320 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 OR51A7Q8NH64 312 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 S100A16Q96FQ6 103 aaKnown RBP5.77□□□□□ -1.49
SMAD4-212ENST00000591126 KCTD7Q96MP8 289 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 ZNF184Q99676 751 aaPredicted RBP5.77□□□□□ -1.49
SMAD4-212ENST00000591126 DCUN1D5Q9BTE7 237 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 SLCO1B3Q9NPD5 702 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 SLC23A2Q9UGH3 650 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 DUSP13Q9UII6 198 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 HHLA2Q9UM44 414 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 AMMECR1Q9Y4X0 333 aaPredicted RBP5.77□□□□□ -1.49
SMAD4-212ENST00000591126 B4DXG7 233 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 L7N2F9 121 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 CCL4P13236 92 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 OSMP13725 252 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 CEACAM3P40198 252 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 EFNA3P52797 238 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 VAMP2P63027 116 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 ZNF750Q32MQ0 723 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 CLEC12AQ5QGZ9 265 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 ACSM5Q6NUN0 579 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.76□□□□□ -1.49
SMAD4-212ENST00000591126 HS3ST5Q8IZT8 346 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 OR4K5Q8NGD3 323 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 OR6K3Q8NGY3 331 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 OR6S1Q8NH40 331 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 SLCO5A1Q9H2Y9 848 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 ING4Q9UNL4 249 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 ATG4BQ9Y4P1 393 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 ARPC4-TTLL3A0A0A6YYG9 625 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 CLDN24A6NM45 220 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 SPINT2O43291 252 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 KLK8O60259 260 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 OR7A10O76100 309 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 CBX6O95503 412 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 PRR35P0CG20 571 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 ZNF16P17020 682 aaPredicted RBP5.76□□□□□ -1.49
SMAD4-212ENST00000591126 PTAFRP25105 342 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 INSM1Q01101 510 aaPredicted RBP5.76□□□□□ -1.49
SMAD4-212ENST00000591126 E2F2Q14209 437 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 COL19A1Q14993 1142 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 CDK10Q15131 360 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 BHLHA15Q7RTS1 189 aaPredicted RBP5.76□□□□□ -1.49
SMAD4-212ENST00000591126 LSRQ86X29 649 aaPredicted RBP5.76□□□□□ -1.49
SMAD4-212ENST00000591126 IGDCC3Q8IVU1 814 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 ZNF808Q8N4W9 903 aaPredicted RBP5.76□□□□□ -1.49
SMAD4-212ENST00000591126 CLDN22Q8N7P3 220 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 GLIS1Q8NBF1 620 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 GALNT11Q8NCW6 608 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 OR52E2Q8NGJ4 325 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 OR2I1PQ8NGU4 316 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 ZNF501Q96CX3 271 aaPredicted RBP5.76□□□□□ -1.49
SMAD4-212ENST00000591126 ZC3HAV1LQ96H79 300 aaKnown RBP5.76□□□□□ -1.49
SMAD4-212ENST00000591126 NSUN5Q96P11 429 aaKnown RBP5.76□□□□□ -1.49
SMAD4-212ENST00000591126 KCNA7Q96RP8 456 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 TSC22D3Q99576 134 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 SEMA4CQ9C0C4 833 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 METTL9Q9H1A3 318 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 OR10A4Q9H209 315 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 TCEAL2Q9H3H9 227 aaPredicted RBP5.76□□□□□ -1.49
SMAD4-212ENST00000591126 BCL2L10Q9HD36 194 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 BRD7Q9NPI1 651 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 PAIP2BQ9ULR5 123 aaKnown RBP5.76□□□□□ -1.49
SMAD4-212ENST00000591126 A0A0G2JMZ2 1700 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 LRRC37A2A6NM11 1700 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 CXCL13O43927 109 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 OPN1SWP03999 348 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 TFPTP0C1Z6 253 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 TMEM225BP0DP42 221 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 PEX2P28328 305 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 YAP1P46937 504 aaKnown RBP5.76□□□□□ -1.49
SMAD4-212ENST00000591126 EIF2B2P49770 351 aaKnown RBP5.76□□□□□ -1.49
SMAD4-212ENST00000591126 RAC3P60763 192 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 OR8G1Q15617 311 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 TATDN3Q17R31 274 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 PLCXD3Q63HM9 321 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 TRAT1Q6PIZ9 186 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 ZNF573Q86YE8 665 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 CPNE8Q86YQ8 564 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 KLBQ86Z14 1044 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 CMTM1Q8IZ96 169 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 OR8H2Q8N162 312 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 ZNF611Q8N823 705 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 LRRN4CLQ8ND94 238 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 PHYHIPQ92561 330 aa5.76□□□□□ -1.49
SMAD4-212ENST00000591126 C8orf44Q96CB5 159 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms